Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is lgt [H]

Identifier: 113475245

GI number: 113475245

Start: 2369918

End: 2370784

Strand: Reverse

Name: lgt [H]

Synonym: Tery_1553

Alternate gene names: 113475245

Gene position: 2370784-2369918 (Counterclockwise)

Preceding gene: 113475247

Following gene: 113475244

Centisome position: 30.59

GC content: 37.02

Gene sequence:

>867_bases
ATGACAGTAGAGATTACCTTATTGCCTTTAGGCTTTCAATTTACTTCTCCAGGTCCAATTATTTTTCAGTTGGGACCTTT
GATAATTCGCTGGTATGGACTTTTAATTGCAGCTGCACTATTAATTGGAGTCACTCTTTCCCAATACTTAGCTAAACTTC
GTCATGTTAACCCAGAATTATTGGGTGATTTAGTGATTTGGTTAGTATTAGCCGCAATTCCTGGAGCCCGTTTGTACTAT
GTTCTCTTTGAGTGGGAACAATATCAACAAAATCCTATAGATATGATTGCTATTTGGAAAGGAGGAATTGCAATTCATGG
AGCAATTATTGGTGGGGCGATCGCTGCTTTGATTTTTGCCAGACTCAATAAAATTTCTTTCTGGCAATTAGCAGATTTAG
TAGCTCCTTCTTTAATTTTAGGACAAGTCATCGGTCGGTGGGGTAATTTTTTCAATTCTGAGGCTTTTGGCAGTCCCACA
GATTTACCTTGGAAGTTGTATATTCCTCCAGAACGTCGTCCGTTAGACTTAATAAGTTTTGATTATTTCCATCCGACTTT
TTTATATGAGTCTTTATGGAATTTGATAGTATTTGGATTATTAATATTTCTTTTTTTTAGAGATTTGCGGGGTAGACCTC
GACTTAAACCAGGGACTTTATTTCTAGTCTATATGGTTGCTTATAGTAGTGGACGGATTTGGATTGAAGCATTGCGCACT
GATAGTTTAATGTTAGGACCATTACGCATTGCTCAGTTTGTCAGTTTAGCTGGTATTTTGTTGGGATTAATAGGTTTAGG
GTGGCTATATTTGTTGAAACGACCTTTGCTAGATGTTTTACCCCCAGAAGTTAAAGAAACAAACTGA

Upstream 100 bases:

>100_bases
AGGTTTTAAGCCTACCCTTTCATGGGGATAAAAAGAAATTTATGATTTCAAGCCCTCAACCAAAGTGAGAGGTACTAATA
ACTTATAACTGATAACTGAA

Downstream 100 bases:

>100_bases
ACTAAACTAAGTGAAAAATTAGAAAAGTCCTAGACATAAAGCCTAGGACTAAACCAGGGTGCATCTACCATTCCATTTAT
CTGAAGATAAAGACTCATAT

Product: prolipoprotein diacylglyceryl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTVEITLLPLGFQFTSPGPIIFQLGPLIIRWYGLLIAAALLIGVTLSQYLAKLRHVNPELLGDLVIWLVLAAIPGARLYY
VLFEWEQYQQNPIDMIAIWKGGIAIHGAIIGGAIAALIFARLNKISFWQLADLVAPSLILGQVIGRWGNFFNSEAFGSPT
DLPWKLYIPPERRPLDLISFDYFHPTFLYESLWNLIVFGLLIFLFFRDLRGRPRLKPGTLFLVYMVAYSSGRIWIEALRT
DSLMLGPLRIAQFVSLAGILLGLIGLGWLYLLKRPLLDVLPPEVKETN

Sequences:

>Translated_288_residues
MTVEITLLPLGFQFTSPGPIIFQLGPLIIRWYGLLIAAALLIGVTLSQYLAKLRHVNPELLGDLVIWLVLAAIPGARLYY
VLFEWEQYQQNPIDMIAIWKGGIAIHGAIIGGAIAALIFARLNKISFWQLADLVAPSLILGQVIGRWGNFFNSEAFGSPT
DLPWKLYIPPERRPLDLISFDYFHPTFLYESLWNLIVFGLLIFLFFRDLRGRPRLKPGTLFLVYMVAYSSGRIWIEALRT
DSLMLGPLRIAQFVSLAGILLGLIGLGWLYLLKRPLLDVLPPEVKETN
>Mature_287_residues
TVEITLLPLGFQFTSPGPIIFQLGPLIIRWYGLLIAAALLIGVTLSQYLAKLRHVNPELLGDLVIWLVLAAIPGARLYYV
LFEWEQYQQNPIDMIAIWKGGIAIHGAIIGGAIAALIFARLNKISFWQLADLVAPSLILGQVIGRWGNFFNSEAFGSPTD
LPWKLYIPPERRPLDLISFDYFHPTFLYESLWNLIVFGLLIFLFFRDLRGRPRLKPGTLFLVYMVAYSSGRIWIEALRTD
SLMLGPLRIAQFVSLAGILLGLIGLGWLYLLKRPLLDVLPPEVKETN

Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]

COG id: COG0682

COG function: function code M; Prolipoprotein diacylglyceryltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lgt family [H]

Homologues:

Organism=Escherichia coli, GI1789192, Length=285, Percent_Identity=29.8245614035088, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001640 [H]

Pfam domain/function: PF01790 LGT [H]

EC number: 2.4.99.- [C]

Molecular weight: Translated: 32489; Mature: 32358

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS01311 LGT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVEITLLPLGFQFTSPGPIIFQLGPLIIRWYGLLIAAALLIGVTLSQYLAKLRHVNPEL
CEEEEEEEEECEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LGDLVIWLVLAAIPGARLYYVLFEWEQYQQNPIDMIAIWKGGIAIHGAIIGGAIAALIFA
HHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHH
RLNKISFWQLADLVAPSLILGQVIGRWGNFFNSEAFGSPTDLPWKLYIPPERRPLDLISF
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
DYFHPTFLYESLWNLIVFGLLIFLFFRDLRGRPRLKPGTLFLVYMVAYSSGRIWIEALRT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC
DSLMLGPLRIAQFVSLAGILLGLIGLGWLYLLKRPLLDVLPPEVKETN
CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TVEITLLPLGFQFTSPGPIIFQLGPLIIRWYGLLIAAALLIGVTLSQYLAKLRHVNPEL
EEEEEEEEECEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LGDLVIWLVLAAIPGARLYYVLFEWEQYQQNPIDMIAIWKGGIAIHGAIIGGAIAALIFA
HHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHH
RLNKISFWQLADLVAPSLILGQVIGRWGNFFNSEAFGSPTDLPWKLYIPPERRPLDLISF
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
DYFHPTFLYESLWNLIVFGLLIFLFFRDLRGRPRLKPGTLFLVYMVAYSSGRIWIEALRT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC
DSLMLGPLRIAQFVSLAGILLGLIGLGWLYLLKRPLLDVLPPEVKETN
CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]