Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475241

Identifier: 113475241

GI number: 113475241

Start: 2361896

End: 2362381

Strand: Direct

Name: 113475241

Synonym: Tery_1549

Alternate gene names: NA

Gene position: 2361896-2362381 (Clockwise)

Preceding gene: 113475240

Following gene: 113475246

Centisome position: 30.48

GC content: 35.19

Gene sequence:

>486_bases
ATGAAAAAAACCATCATCGGTGTCATGGGTCCTGGCAATAGCGCCACTTCAACAGACCTAAAAAATGCCTATAAACTAGG
TCAATTAATTGCTCAAGAATCTTGGGTATTATTGACAGGAGGGCGAAATATTGGAGTAATGGATGCTGCGAGTCGGGGAG
CGAAATTTCTTAATGGTTTAACTATTGGAATTTTACCCGACAATAATCTTCATAGTATTTCTGAGGCTGTAGATATTCCC
ATTATTACTGATATGGGAAATAGTCGTAATAATATTAATGTACTTTCTAGTGACGTTGTTATTGCCTGCGGAATGGGAGT
AGGAACTGCTTCCGAAATTGCTTTAGCAATTAAGAATAATAAAAAAGTAATTTTGTTGAATAATAACTTAGAAAGTCAGG
CTTTTTTTGTTGCCTTATCTCCTCAAACAGTTTTTGTTGTAAACACTCCAGAAGCCGTTATTGAAGTAGTTAAAAATTTG
ATTTGA

Upstream 100 bases:

>100_bases
AAATTATGTATTGTAGGTATCTTCCCCAGGTAGTTTTAACTCATAAAAAAAGAAAGCACCGTAAGTTATTTCAGCTATAA
AATAAAAAAAAATACCAAAA

Downstream 100 bases:

>100_bases
GTAGTATTCTATCAATCTTTTCCTAAATGCAGATCGCAATTGAAACTACTGTAAGCGCAAACCATTAAAGCAAAATAACC
GCTTACGGCGCTTTTCAAAT

Product: P450 cytochrome

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKKTIIGVMGPGNSATSTDLKNAYKLGQLIAQESWVLLTGGRNIGVMDAASRGAKFLNGLTIGILPDNNLHSISEAVDIP
IITDMGNSRNNINVLSSDVVIACGMGVGTASEIALAIKNNKKVILLNNNLESQAFFVALSPQTVFVVNTPEAVIEVVKNL
I

Sequences:

>Translated_161_residues
MKKTIIGVMGPGNSATSTDLKNAYKLGQLIAQESWVLLTGGRNIGVMDAASRGAKFLNGLTIGILPDNNLHSISEAVDIP
IITDMGNSRNNINVLSSDVVIACGMGVGTASEIALAIKNNKKVILLNNNLESQAFFVALSPQTVFVVNTPEAVIEVVKNL
I
>Mature_161_residues
MKKTIIGVMGPGNSATSTDLKNAYKLGQLIAQESWVLLTGGRNIGVMDAASRGAKFLNGLTIGILPDNNLHSISEAVDIP
IITDMGNSRNNINVLSSDVVIACGMGVGTASEIALAIKNNKKVILLNNNLESQAFFVALSPQTVFVVNTPEAVIEVVKNL
I

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005268
- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 16947; Mature: 16947

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTIIGVMGPGNSATSTDLKNAYKLGQLIAQESWVLLTGGRNIGVMDAASRGAKFLNGL
CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCHHHCCC
TIGILPDNNLHSISEAVDIPIITDMGNSRNNINVLSSDVVIACGMGVGTASEIALAIKNN
EEEEECCCCCHHHHHHCCCEEEECCCCCCCCEEEEECCEEEEECCCCCCHHHEEEEEECC
KKVILLNNNLESQAFFVALSPQTVFVVNTPEAVIEVVKNLI
CEEEEEECCCCCEEEEEEECCCEEEEEECCHHHHHHHHHCC
>Mature Secondary Structure
MKKTIIGVMGPGNSATSTDLKNAYKLGQLIAQESWVLLTGGRNIGVMDAASRGAKFLNGL
CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCCHHHCCC
TIGILPDNNLHSISEAVDIPIITDMGNSRNNINVLSSDVVIACGMGVGTASEIALAIKNN
EEEEECCCCCHHHHHHCCCEEEECCCCCCCCEEEEECCEEEEECCCCCCHHHEEEEEECC
KKVILLNNNLESQAFFVALSPQTVFVVNTPEAVIEVVKNLI
CEEEEEECCCCCEEEEEEECCCEEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]