Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475246

Identifier: 113475246

GI number: 113475246

Start: 2373080

End: 2373454

Strand: Direct

Name: 113475246

Synonym: Tery_1554

Alternate gene names: NA

Gene position: 2373080-2373454 (Clockwise)

Preceding gene: 113475241

Following gene: 113475250

Centisome position: 30.62

GC content: 26.67

Gene sequence:

>375_bases
ATGGAACTATTGCAAGAACAAATTTTTGCTTTGACTAAAAAAGTTGAAGTAATATATAGAATTATTGAACAACTCAATGA
CAAGGTATCAAATTACATAATTATTGAGAAAGTAAATAAATATCAAACTACAGAAACTGATTCTAATCTGCAACAAGGCA
ATGAACTTCAAGAAAAATATGACTATTTTAACCCAGAATTAGAACATAAGGATGTCCTAGTAGATGATAATTATTTGAAT
AAGAGTAGTCAAAATATTGATGGAGAATTAACATCAAATATTCAAATTCAACGGTTAACAGCTCAGTTAACAGCAGCTTA
TAATCGAATTGCTTCCTTAGAAGAACAATTACTATCAAAAAAAATTAAATTTTAG

Upstream 100 bases:

>100_bases
TTATTATAAAGTTAAGAAATTAAAAATAATAACCACATAGATATAGAAGTTAATTAGGATTGAATAGTGTAAACTTAATT
TTCAAGTGGTGAAGAAATAT

Downstream 100 bases:

>100_bases
AGATTACATATATAGCATTTTCAGGCGTTGGTGAATCAAGCTATGAATTAAGATCTGATTTTAAATATCATTTTGATTAT
ATAGTCTAAAATTATGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MELLQEQIFALTKKVEVIYRIIEQLNDKVSNYIIIEKVNKYQTTETDSNLQQGNELQEKYDYFNPELEHKDVLVDDNYLN
KSSQNIDGELTSNIQIQRLTAQLTAAYNRIASLEEQLLSKKIKF

Sequences:

>Translated_124_residues
MELLQEQIFALTKKVEVIYRIIEQLNDKVSNYIIIEKVNKYQTTETDSNLQQGNELQEKYDYFNPELEHKDVLVDDNYLN
KSSQNIDGELTSNIQIQRLTAQLTAAYNRIASLEEQLLSKKIKF
>Mature_124_residues
MELLQEQIFALTKKVEVIYRIIEQLNDKVSNYIIIEKVNKYQTTETDSNLQQGNELQEKYDYFNPELEHKDVLVDDNYLN
KSSQNIDGELTSNIQIQRLTAQLTAAYNRIASLEEQLLSKKIKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14560; Mature: 14560

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLQEQIFALTKKVEVIYRIIEQLNDKVSNYIIIEKVNKYQTTETDSNLQQGNELQEKY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHCCHHHHHHH
DYFNPELEHKDVLVDDNYLNKSSQNIDGELTSNIQIQRLTAQLTAAYNRIASLEEQLLSK
HHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KIKF
HCCC
>Mature Secondary Structure
MELLQEQIFALTKKVEVIYRIIEQLNDKVSNYIIIEKVNKYQTTETDSNLQQGNELQEKY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHCCHHHHHHH
DYFNPELEHKDVLVDDNYLNKSSQNIDGELTSNIQIQRLTAQLTAAYNRIASLEEQLLSK
HHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KIKF
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA