Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475240

Identifier: 113475240

GI number: 113475240

Start: 2360072

End: 2361457

Strand: Direct

Name: 113475240

Synonym: Tery_1548

Alternate gene names: NA

Gene position: 2360072-2361457 (Clockwise)

Preceding gene: 113475239

Following gene: 113475241

Centisome position: 30.45

GC content: 33.62

Gene sequence:

>1386_bases
ATGAAAAACTTGACAATTAGCTTATTAGCATTTCATCTATATTCTCCATTCCTAGAATCTTCAGAAACAAACGACCAGGA
AGGCAAATTATTATGGGAAAACCTCACCCAACTCGGAGAAAAATCTCTACCATTTTTAGGACTCAAATATTTACCCCATC
AATTAATTTGCTACGACCAAAATGGCAACTACAACCTAGATTTTAAAACTCATGAAAATAACTGGTGGATGAGCAGATCA
AAGCAAACAATAGACCTAGGTGTAATTGAAATAGAAGAATGCAAAATAGCAGGTAATCTCCAGCCATTTATCCTCAACGA
CACCTACGCCGCCGACCTAACTCTCACACCTAAATTATCAGAAGAAAAACTAGATATTTCTCAACTAAAAAAATTCCCCA
TAAACAACCTATTACCCTCATCAATTCAAGCATCACTAGGAGAAACATTTTTAATTTATGGAGAAATAGACTCAGAAGTA
AATCCCCAACAAATAGCCGATGAATGTGTAGAAAACTTATTCAATTCCGCCCAAATTGAACCTGTATTTCTCAGCCAAAG
CAAATTATTTAATAGCTTACTATTTGAATACCAAGGAACAGAATTAAACCAAAATAATAACCAAAGTCAACCATTCAAAA
TATTAGTCTTATTAAAAAATAGTCAAGCAGAAACATTAAAACTAGCAGAAAAATCCTATGAATGGATATTACAATTATTA
TGTTGTCGCCATAAAATCAATTTTATCTATCAAGAATCACGAAATCTCTACCCCAAAGCCCGAAAATCCTACGGCAAATT
AGAAACACAAATGGAAAACTTCTCTAAAATAATAGAAGACCCAAAAACCAGACTAGAATCTCTCAAAGAAATCCTCGAAA
AAATACCAAAAGACTATCTATATTATTCCCGTTATGTGCGAGACCTAAAAACACATAAAACCGCCCTCGAAACAAACATC
AAAAATTATGAAATCTGCCTAGAAAAAATTAAAAAAACTAGTGAAATCCCTCCATATTGGCAAGAATTTTTGAATAAAAC
CAGCCACATCCGTCACAGACAAATTGAAACCGATATTAACTATCTATCCCCTGGTCAGCAGTTATTTGAACAATTAGTAA
ACGCAATTAGAGGCATAGCAGAAACAGACCAATTAGAAAGCGATCGCCACTTAGAAAGAACCATTCAAATTATTGGTATA
GGATTAGGAACAGGAGGAATTATTGCTTCTAGTACTGGTCATATTGATGTACCTCTAACCTTCAAATCTACCGGAAAAAT
AGAAACAATTCATCCTGTTATTTTGACTTTAATTTTAAGCATTTTAGCCACCCTATTAGCAGGAGGAATAACCTGGCATC
TTACCAAACCTAAAAACAAAAAATAA

Upstream 100 bases:

>100_bases
AAACCCAAAAAAGTAGTATTAATATCTATAGAAAAACATATATAATAGCCATAAAATTGTAGGCTAGATTGAAAAATGAA
ACAAAATACTAAATCTAAAA

Downstream 100 bases:

>100_bases
AATAATTAAATGGTAATATTTTATCAAAAAAAATATTACCATTCAGTCCTCAGCTATTAGCTAATTATCTAGGCAAAATT
GAGAGATAAATCAATTATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MKNLTISLLAFHLYSPFLESSETNDQEGKLLWENLTQLGEKSLPFLGLKYLPHQLICYDQNGNYNLDFKTHENNWWMSRS
KQTIDLGVIEIEECKIAGNLQPFILNDTYAADLTLTPKLSEEKLDISQLKKFPINNLLPSSIQASLGETFLIYGEIDSEV
NPQQIADECVENLFNSAQIEPVFLSQSKLFNSLLFEYQGTELNQNNNQSQPFKILVLLKNSQAETLKLAEKSYEWILQLL
CCRHKINFIYQESRNLYPKARKSYGKLETQMENFSKIIEDPKTRLESLKEILEKIPKDYLYYSRYVRDLKTHKTALETNI
KNYEICLEKIKKTSEIPPYWQEFLNKTSHIRHRQIETDINYLSPGQQLFEQLVNAIRGIAETDQLESDRHLERTIQIIGI
GLGTGGIIASSTGHIDVPLTFKSTGKIETIHPVILTLILSILATLLAGGITWHLTKPKNKK

Sequences:

>Translated_461_residues
MKNLTISLLAFHLYSPFLESSETNDQEGKLLWENLTQLGEKSLPFLGLKYLPHQLICYDQNGNYNLDFKTHENNWWMSRS
KQTIDLGVIEIEECKIAGNLQPFILNDTYAADLTLTPKLSEEKLDISQLKKFPINNLLPSSIQASLGETFLIYGEIDSEV
NPQQIADECVENLFNSAQIEPVFLSQSKLFNSLLFEYQGTELNQNNNQSQPFKILVLLKNSQAETLKLAEKSYEWILQLL
CCRHKINFIYQESRNLYPKARKSYGKLETQMENFSKIIEDPKTRLESLKEILEKIPKDYLYYSRYVRDLKTHKTALETNI
KNYEICLEKIKKTSEIPPYWQEFLNKTSHIRHRQIETDINYLSPGQQLFEQLVNAIRGIAETDQLESDRHLERTIQIIGI
GLGTGGIIASSTGHIDVPLTFKSTGKIETIHPVILTLILSILATLLAGGITWHLTKPKNKK
>Mature_461_residues
MKNLTISLLAFHLYSPFLESSETNDQEGKLLWENLTQLGEKSLPFLGLKYLPHQLICYDQNGNYNLDFKTHENNWWMSRS
KQTIDLGVIEIEECKIAGNLQPFILNDTYAADLTLTPKLSEEKLDISQLKKFPINNLLPSSIQASLGETFLIYGEIDSEV
NPQQIADECVENLFNSAQIEPVFLSQSKLFNSLLFEYQGTELNQNNNQSQPFKILVLLKNSQAETLKLAEKSYEWILQLL
CCRHKINFIYQESRNLYPKARKSYGKLETQMENFSKIIEDPKTRLESLKEILEKIPKDYLYYSRYVRDLKTHKTALETNI
KNYEICLEKIKKTSEIPPYWQEFLNKTSHIRHRQIETDINYLSPGQQLFEQLVNAIRGIAETDQLESDRHLERTIQIIGI
GLGTGGIIASSTGHIDVPLTFKSTGKIETIHPVILTLILSILATLLAGGITWHLTKPKNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53044; Mature: 53044

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLTISLLAFHLYSPFLESSETNDQEGKLLWENLTQLGEKSLPFLGLKYLPHQLICYDQ
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEEC
NGNYNLDFKTHENNWWMSRSKQTIDLGVIEIEECKIAGNLQPFILNDTYAADLTLTPKLS
CCCEEEEEEECCCCEEECCCCCEEEEEEEEEEEEEECCCCCCEEECCCEEECEEECCCCC
EEKLDISQLKKFPINNLLPSSIQASLGETFLIYGEIDSEVNPQQIADECVENLFNSAQIE
CCCCCHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
PVFLSQSKLFNSLLFEYQGTELNQNNNQSQPFKILVLLKNSQAETLKLAEKSYEWILQLL
EEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHH
CCRHKINFIYQESRNLYPKARKSYGKLETQMENFSKIIEDPKTRLESLKEILEKIPKDYL
HHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHH
YYSRYVRDLKTHKTALETNIKNYEICLEKIKKTSEIPPYWQEFLNKTSHIRHRQIETDIN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
YLSPGQQLFEQLVNAIRGIAETDQLESDRHLERTIQIIGIGLGTGGIIASSTGHIDVPLT
CCCCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHEEEEEEEEECCCCEEECCCCCEEEEEE
FKSTGKIETIHPVILTLILSILATLLAGGITWHLTKPKNKK
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC
>Mature Secondary Structure
MKNLTISLLAFHLYSPFLESSETNDQEGKLLWENLTQLGEKSLPFLGLKYLPHQLICYDQ
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCEEEEEEC
NGNYNLDFKTHENNWWMSRSKQTIDLGVIEIEECKIAGNLQPFILNDTYAADLTLTPKLS
CCCEEEEEEECCCCEEECCCCCEEEEEEEEEEEEEECCCCCCEEECCCEEECEEECCCCC
EEKLDISQLKKFPINNLLPSSIQASLGETFLIYGEIDSEVNPQQIADECVENLFNSAQIE
CCCCCHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
PVFLSQSKLFNSLLFEYQGTELNQNNNQSQPFKILVLLKNSQAETLKLAEKSYEWILQLL
EEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHH
CCRHKINFIYQESRNLYPKARKSYGKLETQMENFSKIIEDPKTRLESLKEILEKIPKDYL
HHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHH
YYSRYVRDLKTHKTALETNIKNYEICLEKIKKTSEIPPYWQEFLNKTSHIRHRQIETDIN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
YLSPGQQLFEQLVNAIRGIAETDQLESDRHLERTIQIIGIGLGTGGIIASSTGHIDVPLT
CCCCHHHHHHHHHHHHHCCHHHHHCCCHHHHHHEEEEEEEEECCCCEEECCCCCEEEEEE
FKSTGKIETIHPVILTLILSILATLLAGGITWHLTKPKNKK
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA