| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474998
Identifier: 113474998
GI number: 113474998
Start: 1916945
End: 1917445
Strand: Reverse
Name: 113474998
Synonym: Tery_1236
Alternate gene names: NA
Gene position: 1917445-1916945 (Counterclockwise)
Preceding gene: 113474999
Following gene: 113474992
Centisome position: 24.74
GC content: 35.53
Gene sequence:
>501_bases TTGAAAAATTCAATATTAACTGATTTACAAATTCCAGAAGCAGCTAAATTTCCGGAACCTATTCCCACAAATTTAAAGAA CTTGGTAGAAAAAGGATTAAAATTAGTAAAAGAGATTGTTAACGACGACCCTCCTGGTCATTTCTTAATTGCTAACCCAG GAGAGATCTTTAATCCTGAAAACCATGAACCTGTCCCCAGTTGTGAACCCAGTGGCCAGATTGTTTATACTACCTATCCA GGATACTCCGTAAACAACCGTATTATTGGTGAATCACTTAAAGCTTTTGTATTTACCGAGCCTAACAAACAACCTGAAGG CCAAGAAGAACAACCTTTTGAAAATAATCAAAATCATCAACAGCCAAATTCTATAGAAAATGAACAGCAGTCTCCCTCTA ATCAACAATTAAAACCCACTTCCAATCATCAGAGCCCAGTTCCACAAACTTCTGAAAATAATCAAAATAATCAACAGCCA AGTTCTATAGAAAATCAATAG
Upstream 100 bases:
>100_bases TAAACATGTATTTTCTAAACATATATTTGACCAAGGAAGTCAATATTTTACTGACAATAATTCAATAGGAGAATATAAAT TTCCTCAAGTTGTCGAAGAC
Downstream 100 bases:
>100_bases CAGTCTCTTATGACACACCAAGACTAAGAGCATCTCAGGCCGACCCTAACTTTTAGTCGTATGCTTTAACTACCCCGGCG GGAAATCCCGCGCTATTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MKNSILTDLQIPEAAKFPEPIPTNLKNLVEKGLKLVKEIVNDDPPGHFLIANPGEIFNPENHEPVPSCEPSGQIVYTTYP GYSVNNRIIGESLKAFVFTEPNKQPEGQEEQPFENNQNHQQPNSIENEQQSPSNQQLKPTSNHQSPVPQTSENNQNNQQP SSIENQ
Sequences:
>Translated_166_residues MKNSILTDLQIPEAAKFPEPIPTNLKNLVEKGLKLVKEIVNDDPPGHFLIANPGEIFNPENHEPVPSCEPSGQIVYTTYP GYSVNNRIIGESLKAFVFTEPNKQPEGQEEQPFENNQNHQQPNSIENEQQSPSNQQLKPTSNHQSPVPQTSENNQNNQQP SSIENQ >Mature_166_residues MKNSILTDLQIPEAAKFPEPIPTNLKNLVEKGLKLVKEIVNDDPPGHFLIANPGEIFNPENHEPVPSCEPSGQIVYTTYP GYSVNNRIIGESLKAFVFTEPNKQPEGQEEQPFENNQNHQQPNSIENEQQSPSNQQLKPTSNHQSPVPQTSENNQNNQQP SSIENQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18589; Mature: 18589
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSILTDLQIPEAAKFPEPIPTNLKNLVEKGLKLVKEIVNDDPPGHFLIANPGEIFNPE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC NHEPVPSCEPSGQIVYTTYPGYSVNNRIIGESLKAFVFTEPNKQPEGQEEQPFENNQNHQ CCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC QPNSIENEQQSPSNQQLKPTSNHQSPVPQTSENNQNNQQPSSIENQ CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKNSILTDLQIPEAAKFPEPIPTNLKNLVEKGLKLVKEIVNDDPPGHFLIANPGEIFNPE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC NHEPVPSCEPSGQIVYTTYPGYSVNNRIIGESLKAFVFTEPNKQPEGQEEQPFENNQNHQ CCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC QPNSIENEQQSPSNQQLKPTSNHQSPVPQTSENNQNNQQPSSIENQ CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA