Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474999

Identifier: 113474999

GI number: 113474999

Start: 1917668

End: 1919488

Strand: Reverse

Name: 113474999

Synonym: Tery_1237

Alternate gene names: NA

Gene position: 1919488-1917668 (Counterclockwise)

Preceding gene: 113475000

Following gene: 113474998

Centisome position: 24.77

GC content: 36.79

Gene sequence:

>1821_bases
TTGATAGCTAAATATATTCGTCTCATTAAAGACGAAGCTCTCAAGGAAATTAAAAACAGTACCTCTGGAGAATTAAAGGA
TCAAGAAATTAGGTGGTGTTTAAGTATACCAGCAATTTGGAAAAATGAAGATAAAGATTTGATGCGTCGTGCGGCACGAA
AAGCTGGATTAATTAATTCCTCTGATGATGAAGCTGAACGTCTTTTCCTTGTATTAGAGCCAGAAGCAGCTGCTATCTTT
TGCCAAGAGGAAGATAAAAATGCACTAACACCTGGTAATAAGATTATGATAATTGACTGCGGTGGCGGTACAGTCGATAT
CACTGTTCATAAGTTGGTCAAAGATGGTGGACTTGATGAGGTAGCTCCTGGGACAGGTGGTCCTTTTGGCTCGATATATG
TAGATAAAAGCTTTCAAGAATATTTGACCGAAAAACTCTCTGCTGAAATGGTGAAGGGTTTCCATGATCAGGATCCTGTT
GGTTATTTGAAGATGATGGAGGAGTGGGAACGAACAAAGTGCAACTTCGATCCAGAAACTAGTGGTGATGTTATTTACTT
TAACATTCCAACCAGACTTTACAATTTTATCTCCAAGCGTAAAGCAAAAATCCTCGAACAGCTAGCTGATGAACAAAACG
GGGATGATGAAAATATTCATCTAAGCTACTCAACAATGGAAAATATTTTCCGTATCACTGTTCATAAGTTGGTCAAAGAT
GGTGGACTTGATGAGGTAGCTCCTGGGACAGGTGGTCCTTTTGGCTCGATATATGTAGATAAAAGCTTTCAAGAATATTT
GACCGAAAAACTCTCTGCTGAAATGGTGAAGGGTTTCCATGATCAGGAGCCTGTTGATTATTTGAAGATGATGGAGGAGT
GGGAACGAACAAAGTGCAACTTCGATCCAGAAACTAGTGGTGATGTTATTTACTTTAACATTCCAACCAGACTTTACAAT
TTTATCTCCAAGCGTAAAGCAAAAATCCTCGAACAGCTAGCTGATGAACAAAACGGGGATGATAAAAATATTCATCTAAG
TTACTCAACAATGGAAAATATTTTCCGTCCAACTTTAGATGGTTTAGTTTCAACAGTTAAAAATCAATTTAAAGAGTTGG
GAGATGAAGAAGTTGACATCATCTTTCTTGTTGGCGGATTTTCTACTTCCCCTGTGCTCCGGCAGCGAATTAAAAAAGAG
TTTGGAAGCAAGGCCAAGAAAATTGTTATGCCTCCACGTCCGGGTGTTGCCATTTTAAAGGGGGCAGCATCTTTCGGTGT
TGCTCCAGGCATCATTCGCGCCAGGCGGAGTCGATTAACCTATGGTGTTTCATCCTCTAGGGAATTTAATCAATTTAAGG
ATACAATTATAAGTCAAAAACAGCAAAGTGATAATCCCGAAAATTGGGAAAATTGCTTGAGAGTATATAAAAATAATAAT
GATTTTTTGAATTGGTTATTAAATAATTTTGATATTCAGTATTCCAATCATAATCATGAACAAGAAAAACAGCAAATTAA
CTCTCTTAAAAATGCACTTAAAAATCCTAAAAAACTTCTAGAAAAATTTTATAATATCTACCTAATGATTGTAGAGCCAA
AAAAAAGATACAACCAAAAACACAAGCAAGAGCTGAAGGAAACAGTATACTTGCTAAACCAAAAAATTCAAAGCCAAGAA
ATACTAATAAATGAGCTTAAGAGGGAAAATGAAAAACTCCGTAAATTGAAAAGTTCTCTTTTAAGTAAGTTAAGCGATCG
TGATCGCGACACAAGTAACACAATTACTTCTGATGAATCACGCCCCCAAAGAGATGTTTGA

Upstream 100 bases:

>100_bases
TACCCGTAACTTTAAAATGGAGTTACATTCTGGTAAAAAAGACGAAAGTTGACCTTATGTCATTAATAAAAATAACGGAG
AAAAAATTTATGTTATTGAC

Downstream 100 bases:

>100_bases
ACTGACAAATTTATCCAACTTAAAAATCAAGAAATCACAAAAGTTAGTCAAGAAATATTCAATCATTTATCTCAAATAAA
TTCAGATTTAAAAGCTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 606; Mature: 606

Protein sequence:

>606_residues
MIAKYIRLIKDEALKEIKNSTSGELKDQEIRWCLSIPAIWKNEDKDLMRRAARKAGLINSSDDEAERLFLVLEPEAAAIF
CQEEDKNALTPGNKIMIIDCGGGTVDITVHKLVKDGGLDEVAPGTGGPFGSIYVDKSFQEYLTEKLSAEMVKGFHDQDPV
GYLKMMEEWERTKCNFDPETSGDVIYFNIPTRLYNFISKRKAKILEQLADEQNGDDENIHLSYSTMENIFRITVHKLVKD
GGLDEVAPGTGGPFGSIYVDKSFQEYLTEKLSAEMVKGFHDQEPVDYLKMMEEWERTKCNFDPETSGDVIYFNIPTRLYN
FISKRKAKILEQLADEQNGDDKNIHLSYSTMENIFRPTLDGLVSTVKNQFKELGDEEVDIIFLVGGFSTSPVLRQRIKKE
FGSKAKKIVMPPRPGVAILKGAASFGVAPGIIRARRSRLTYGVSSSREFNQFKDTIISQKQQSDNPENWENCLRVYKNNN
DFLNWLLNNFDIQYSNHNHEQEKQQINSLKNALKNPKKLLEKFYNIYLMIVEPKKRYNQKHKQELKETVYLLNQKIQSQE
ILINELKRENEKLRKLKSSLLSKLSDRDRDTSNTITSDESRPQRDV

Sequences:

>Translated_606_residues
MIAKYIRLIKDEALKEIKNSTSGELKDQEIRWCLSIPAIWKNEDKDLMRRAARKAGLINSSDDEAERLFLVLEPEAAAIF
CQEEDKNALTPGNKIMIIDCGGGTVDITVHKLVKDGGLDEVAPGTGGPFGSIYVDKSFQEYLTEKLSAEMVKGFHDQDPV
GYLKMMEEWERTKCNFDPETSGDVIYFNIPTRLYNFISKRKAKILEQLADEQNGDDENIHLSYSTMENIFRITVHKLVKD
GGLDEVAPGTGGPFGSIYVDKSFQEYLTEKLSAEMVKGFHDQEPVDYLKMMEEWERTKCNFDPETSGDVIYFNIPTRLYN
FISKRKAKILEQLADEQNGDDKNIHLSYSTMENIFRPTLDGLVSTVKNQFKELGDEEVDIIFLVGGFSTSPVLRQRIKKE
FGSKAKKIVMPPRPGVAILKGAASFGVAPGIIRARRSRLTYGVSSSREFNQFKDTIISQKQQSDNPENWENCLRVYKNNN
DFLNWLLNNFDIQYSNHNHEQEKQQINSLKNALKNPKKLLEKFYNIYLMIVEPKKRYNQKHKQELKETVYLLNQKIQSQE
ILINELKRENEKLRKLKSSLLSKLSDRDRDTSNTITSDESRPQRDV
>Mature_606_residues
MIAKYIRLIKDEALKEIKNSTSGELKDQEIRWCLSIPAIWKNEDKDLMRRAARKAGLINSSDDEAERLFLVLEPEAAAIF
CQEEDKNALTPGNKIMIIDCGGGTVDITVHKLVKDGGLDEVAPGTGGPFGSIYVDKSFQEYLTEKLSAEMVKGFHDQDPV
GYLKMMEEWERTKCNFDPETSGDVIYFNIPTRLYNFISKRKAKILEQLADEQNGDDENIHLSYSTMENIFRITVHKLVKD
GGLDEVAPGTGGPFGSIYVDKSFQEYLTEKLSAEMVKGFHDQEPVDYLKMMEEWERTKCNFDPETSGDVIYFNIPTRLYN
FISKRKAKILEQLADEQNGDDKNIHLSYSTMENIFRPTLDGLVSTVKNQFKELGDEEVDIIFLVGGFSTSPVLRQRIKKE
FGSKAKKIVMPPRPGVAILKGAASFGVAPGIIRARRSRLTYGVSSSREFNQFKDTIISQKQQSDNPENWENCLRVYKNNN
DFLNWLLNNFDIQYSNHNHEQEKQQINSLKNALKNPKKLLEKFYNIYLMIVEPKKRYNQKHKQELKETVYLLNQKIQSQE
ILINELKRENEKLRKLKSSLLSKLSDRDRDTSNTITSDESRPQRDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31317303, Length=457, Percent_Identity=26.0393873085339, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI119874213, Length=219, Percent_Identity=30.1369863013699, Blast_Score=119, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69644; Mature: 69644

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAKYIRLIKDEALKEIKNSTSGELKDQEIRWCLSIPAIWKNEDKDLMRRAARKAGLINS
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCHHHCCCCHHHHHHHHHHCCCCCC
SDDEAERLFLVLEPEAAAIFCQEEDKNALTPGNKIMIIDCGGGTVDITVHKLVKDGGLDE
CCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHCCCCCC
VAPGTGGPFGSIYVDKSFQEYLTEKLSAEMVKGFHDQDPVGYLKMMEEWERTKCNFDPET
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC
SGDVIYFNIPTRLYNFISKRKAKILEQLADEQNGDDENIHLSYSTMENIFRITVHKLVKD
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHC
GGLDEVAPGTGGPFGSIYVDKSFQEYLTEKLSAEMVKGFHDQEPVDYLKMMEEWERTKCN
CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
FDPETSGDVIYFNIPTRLYNFISKRKAKILEQLADEQNGDDKNIHLSYSTMENIFRPTLD
CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHH
GLVSTVKNQFKELGDEEVDIIFLVGGFSTSPVLRQRIKKEFGSKAKKIVMPPRPGVAILK
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHEE
GAASFGVAPGIIRARRSRLTYGVSSSREFNQFKDTIISQKQQSDNPENWENCLRVYKNNN
CCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
DFLNWLLNNFDIQYSNHNHEQEKQQINSLKNALKNPKKLLEKFYNIYLMIVEPKKRYNQK
HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCEEEEEECCHHHHCHH
HKQELKETVYLLNQKIQSQEILINELKRENEKLRKLKSSLLSKLSDRDRDTSNTITSDES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RPQRDV
CCCCCC
>Mature Secondary Structure
MIAKYIRLIKDEALKEIKNSTSGELKDQEIRWCLSIPAIWKNEDKDLMRRAARKAGLINS
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCHHHCCCCHHHHHHHHHHCCCCCC
SDDEAERLFLVLEPEAAAIFCQEEDKNALTPGNKIMIIDCGGGTVDITVHKLVKDGGLDE
CCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHCCCCCC
VAPGTGGPFGSIYVDKSFQEYLTEKLSAEMVKGFHDQDPVGYLKMMEEWERTKCNFDPET
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC
SGDVIYFNIPTRLYNFISKRKAKILEQLADEQNGDDENIHLSYSTMENIFRITVHKLVKD
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHC
GGLDEVAPGTGGPFGSIYVDKSFQEYLTEKLSAEMVKGFHDQEPVDYLKMMEEWERTKCN
CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
FDPETSGDVIYFNIPTRLYNFISKRKAKILEQLADEQNGDDKNIHLSYSTMENIFRPTLD
CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHH
GLVSTVKNQFKELGDEEVDIIFLVGGFSTSPVLRQRIKKEFGSKAKKIVMPPRPGVAILK
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHEE
GAASFGVAPGIIRARRSRLTYGVSSSREFNQFKDTIISQKQQSDNPENWENCLRVYKNNN
CCHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
DFLNWLLNNFDIQYSNHNHEQEKQQINSLKNALKNPKKLLEKFYNIYLMIVEPKKRYNQK
HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCEEEEEECCHHHHCHH
HKQELKETVYLLNQKIQSQEILINELKRENEKLRKLKSSLLSKLSDRDRDTSNTITSDES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RPQRDV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA