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The map label for this gene is rpfG [H]

Identifier: 113474995

GI number: 113474995

Start: 1908790

End: 1910424

Strand: Direct

Name: rpfG [H]

Synonym: Tery_1233

Alternate gene names: 113474995

Gene position: 1908790-1910424 (Clockwise)

Preceding gene: 113474994

Following gene: 113474996

Centisome position: 24.63

GC content: 35.11

Gene sequence:

>1635_bases
ATGATCCAGTTAAATACACTTAAGTTGTTTCAGGAACTTACTGAGACCTCTGAATTATTGATAATAGAGCAGCTACTAGA
TATTGGAGTAGCTCTATCTGACACTTACAATTTGGGTGAACTATTAAATTTAATACTGTCCAAGAGTCGGGAAATAACTT
GTAGCGATGCAGGTAGCGTTTACTTAGTAGATGAGGTAAATTTCAAAGAACGCAAGTTAGTTTTCAAAGTTGCCCAAAAT
GATTCTATTCCAGAACTAGCTTTTCAGGAAATCGCATTACCAATTGACTTTAAAAGCTTGACTGGGTATGTTGCTTTAAC
TGGTCATACTTTAAACATACCAGATGCTTACAATCTTCCTAAAGATATTCCCTATAAGTTTGATGAAAGTTTTGATGAGA
AAACAGGTTATCGCACTTGTTCAGTCTTAATTTTGCCAGTACAAAAACAAAATCAGGAAATTATTGGAGTACTTCAGTTG
ATTAACCGTAAGGTTCAACCTGATGTTGTAATTACAAAAGAAAATGCCAAAGAATTAACTAAAGCATATTCAAAATGGGA
ACAGAGAATATTAATTTCTCTGGCTTCTCAAGCTGCTATATCTATAGAGAGAAATAATCTACAAGAAAATATAGAAAATT
TATTTGAGGGTTTTGTCAAAGCATCAGTACAGGCAATAGAGGCTAGAGACTCCTGCACATCAGGTCATTCAGAGCGAGTA
GCTAAGTTAACGGTAGGACTGTGTCAAGAAGTGAATATAATTACTAATGGAGTATTCTCGGGGACATATTTTAGCAATGA
GCAAATTCAAGAAATGCGTTATGCAGCTCTATTACATGATTTTGGTAAAATAGGAGTGCCAGAAGGTATTTTAACAAAAC
GCAAAAAACTATATCAAGAACAATTAGAGCTAATCAAGCAAAGATTTTCTGTAGCCCAGCGTACTTTGGAAATGGAATCT
GCTCAAACCAAGTACGAATACTTGCTTAGACATTTATCTGGGACATATCAATCACATACTCAAGAAAGTTGTCCTTTGTG
TCAAAAAATTGAAAATTTAGATTTAGAACTAAAAACAGCAATTACTCAGCTTAACAACTATTGGCAAACAATACTAATAG
CTAATGAACCAAAAGTTTTAGCAGAAGAACCACTCAAGCAACTACAACAGATATCACTTTATACCTACAAAGATACAGAT
GGTCAAATTAAACCTCTAATTACATCAGAGGAAATGGCTCAACTTACAGTTCCCAGGGGAAACTTGACTCCTGAAGAACG
ACGAGCTGTTGAAGCTCATGTAACACATTCTTATGAATTTTTAAAGCAAATTGCCTGGACAAAAAATCTACAGAACATAC
CAGAAATTGCTTATGGACATCATGAAAAGTTGGACGGTAGTGGTTATCCTAGGGGACTAAAGAAAAACGAAATTTCTCTT
CAAACCCAGATAATAGTTATCGCAGATATATATGATGCTTTAACTGCTGGCGATCGCCCGTATAAACAAGGGTTACCCGT
AGAAGCGGCTCTGAGAATTATGCGTTCTGAAGCAGCCGAGAATAAAATTAATAGCCATTTCTTGGAACTATTTGAACAAA
AGCAAGTCTTTTCCATACTAGGACATAGTAAATAA

Upstream 100 bases:

>100_bases
TTCCAATCATCTTTTCTAAGTACACTTTTATTAGAAAAAATATTATATTAATTAATAATTAAGTTTATTTAAGCTTAAGG
CTATTGACTAAGCCTAAACT

Downstream 100 bases:

>100_bases
TACGAATTACTAGAAACTTTGCTACATTAAGATTTAAATTTTTATTTAAGTATCACCTTTTAAAGTAAAAAGGCTATTTG
ATATAAGTGGAAAAAACAAA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MIQLNTLKLFQELTETSELLIIEQLLDIGVALSDTYNLGELLNLILSKSREITCSDAGSVYLVDEVNFKERKLVFKVAQN
DSIPELAFQEIALPIDFKSLTGYVALTGHTLNIPDAYNLPKDIPYKFDESFDEKTGYRTCSVLILPVQKQNQEIIGVLQL
INRKVQPDVVITKENAKELTKAYSKWEQRILISLASQAAISIERNNLQENIENLFEGFVKASVQAIEARDSCTSGHSERV
AKLTVGLCQEVNIITNGVFSGTYFSNEQIQEMRYAALLHDFGKIGVPEGILTKRKKLYQEQLELIKQRFSVAQRTLEMES
AQTKYEYLLRHLSGTYQSHTQESCPLCQKIENLDLELKTAITQLNNYWQTILIANEPKVLAEEPLKQLQQISLYTYKDTD
GQIKPLITSEEMAQLTVPRGNLTPEERRAVEAHVTHSYEFLKQIAWTKNLQNIPEIAYGHHEKLDGSGYPRGLKKNEISL
QTQIIVIADIYDALTAGDRPYKQGLPVEAALRIMRSEAAENKINSHFLELFEQKQVFSILGHSK

Sequences:

>Translated_544_residues
MIQLNTLKLFQELTETSELLIIEQLLDIGVALSDTYNLGELLNLILSKSREITCSDAGSVYLVDEVNFKERKLVFKVAQN
DSIPELAFQEIALPIDFKSLTGYVALTGHTLNIPDAYNLPKDIPYKFDESFDEKTGYRTCSVLILPVQKQNQEIIGVLQL
INRKVQPDVVITKENAKELTKAYSKWEQRILISLASQAAISIERNNLQENIENLFEGFVKASVQAIEARDSCTSGHSERV
AKLTVGLCQEVNIITNGVFSGTYFSNEQIQEMRYAALLHDFGKIGVPEGILTKRKKLYQEQLELIKQRFSVAQRTLEMES
AQTKYEYLLRHLSGTYQSHTQESCPLCQKIENLDLELKTAITQLNNYWQTILIANEPKVLAEEPLKQLQQISLYTYKDTD
GQIKPLITSEEMAQLTVPRGNLTPEERRAVEAHVTHSYEFLKQIAWTKNLQNIPEIAYGHHEKLDGSGYPRGLKKNEISL
QTQIIVIADIYDALTAGDRPYKQGLPVEAALRIMRSEAAENKINSHFLELFEQKQVFSILGHSK
>Mature_544_residues
MIQLNTLKLFQELTETSELLIIEQLLDIGVALSDTYNLGELLNLILSKSREITCSDAGSVYLVDEVNFKERKLVFKVAQN
DSIPELAFQEIALPIDFKSLTGYVALTGHTLNIPDAYNLPKDIPYKFDESFDEKTGYRTCSVLILPVQKQNQEIIGVLQL
INRKVQPDVVITKENAKELTKAYSKWEQRILISLASQAAISIERNNLQENIENLFEGFVKASVQAIEARDSCTSGHSERV
AKLTVGLCQEVNIITNGVFSGTYFSNEQIQEMRYAALLHDFGKIGVPEGILTKRKKLYQEQLELIKQRFSVAQRTLEMES
AQTKYEYLLRHLSGTYQSHTQESCPLCQKIENLDLELKTAITQLNNYWQTILIANEPKVLAEEPLKQLQQISLYTYKDTD
GQIKPLITSEEMAQLTVPRGNLTPEERRAVEAHVTHSYEFLKQIAWTKNLQNIPEIAYGHHEKLDGSGYPRGLKKNEISL
QTQIIVIADIYDALTAGDRPYKQGLPVEAALRIMRSEAAENKINSHFLELFEQKQVFSILGHSK

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Homo sapiens, GI219802706, Length=171, Percent_Identity=30.4093567251462, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI226246591, Length=171, Percent_Identity=30.4093567251462, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI4505657, Length=171, Percent_Identity=30.4093567251462, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI61744435, Length=160, Percent_Identity=29.375, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI61744432, Length=160, Percent_Identity=29.375, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI61744430, Length=160, Percent_Identity=29.375, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 61770; Mature: 61770

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLNTLKLFQELTETSELLIIEQLLDIGVALSDTYNLGELLNLILSKSREITCSDAGSV
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHCCCCEEECCCCCE
YLVDEVNFKERKLVFKVAQNDSIPELAFQEIALPIDFKSLTGYVALTGHTLNIPDAYNLP
EEEECCCCCHHHEEEEEECCCCCHHHHHHHHCCCCCHHHHCCEEEEECCEECCCCCCCCC
KDIPYKFDESFDEKTGYRTCSVLILPVQKQNQEIIGVLQLINRKVQPDVVITKENAKELT
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHH
KAYSKWEQRILISLASQAAISIERNNLQENIENLFEGFVKASVQAIEARDSCTSGHSERV
HHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
AKLTVGLCQEVNIITNGVFSGTYFSNEQIQEMRYAALLHDFGKIGVPEGILTKRKKLYQE
HHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QLELIKQRFSVAQRTLEMESAQTKYEYLLRHLSGTYQSHTQESCPLCQKIENLDLELKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCCHHHHHH
ITQLNNYWQTILIANEPKVLAEEPLKQLQQISLYTYKDTDGQIKPLITSEEMAQLTVPRG
HHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHEEEEECCCCCEECEECHHHHHEEECCCC
NLTPEERRAVEAHVTHSYEFLKQIAWTKNLQNIPEIAYGHHEKLDGSGYPRGLKKNEISL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEE
QTQIIVIADIYDALTAGDRPYKQGLPVEAALRIMRSEAAENKINSHFLELFEQKQVFSIL
EEEEEEEEEHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GHSK
CCCC
>Mature Secondary Structure
MIQLNTLKLFQELTETSELLIIEQLLDIGVALSDTYNLGELLNLILSKSREITCSDAGSV
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHCCCCEEECCCCCE
YLVDEVNFKERKLVFKVAQNDSIPELAFQEIALPIDFKSLTGYVALTGHTLNIPDAYNLP
EEEECCCCCHHHEEEEEECCCCCHHHHHHHHCCCCCHHHHCCEEEEECCEECCCCCCCCC
KDIPYKFDESFDEKTGYRTCSVLILPVQKQNQEIIGVLQLINRKVQPDVVITKENAKELT
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHH
KAYSKWEQRILISLASQAAISIERNNLQENIENLFEGFVKASVQAIEARDSCTSGHSERV
HHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
AKLTVGLCQEVNIITNGVFSGTYFSNEQIQEMRYAALLHDFGKIGVPEGILTKRKKLYQE
HHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
QLELIKQRFSVAQRTLEMESAQTKYEYLLRHLSGTYQSHTQESCPLCQKIENLDLELKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCCHHHHHH
ITQLNNYWQTILIANEPKVLAEEPLKQLQQISLYTYKDTDGQIKPLITSEEMAQLTVPRG
HHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHEEEEECCCCCEECEECHHHHHEEECCCC
NLTPEERRAVEAHVTHSYEFLKQIAWTKNLQNIPEIAYGHHEKLDGSGYPRGLKKNEISL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEE
QTQIIVIADIYDALTAGDRPYKQGLPVEAALRIMRSEAAENKINSHFLELFEQKQVFSIL
EEEEEEEEEHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GHSK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]