| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is phhB
Identifier: 113474994
GI number: 113474994
Start: 1907660
End: 1907941
Strand: Direct
Name: phhB
Synonym: Tery_1232
Alternate gene names: NA
Gene position: 1907660-1907941 (Clockwise)
Preceding gene: 113474993
Following gene: 113474995
Centisome position: 24.61
GC content: 32.27
Gene sequence:
>282_bases ATGACTGAATTGCTGGCTGTAGAAGAAATTAATCAACGTATCAGTCAAATATCGGACTGGAAATTAGAAGGAAACAAGCT TAAGTATATAAAAACAGTTAAAAATTTTGTTGAAGCTATTAATTTTGTGAATAAATTAGTAGCTCCTGCTGAGGCTTCAC AACATCATCCAGACTTAGAAGTATCTTACAATAAAGTGACAATCATATTAACAACCCATAATTCTGGCGGCTTAACAGAA AAAGACTTTAAGATGGCTAAAACAATATCTGGCTTAAGTTAG
Upstream 100 bases:
>100_bases CGCTCTTATACAAATTTAGTGTTATAAATATATGATATTGAAACACTATCCCAGATAAGAGCGGATAGTTGCTTATTTTA GTAATTTTAGGAATAGTTCA
Downstream 100 bases:
>100_bases CTAAATACTCGATTCATCTTACACCATAATTGTTGTTAGAGTTGTTGTGGCAAAAAATTAAAGAAACAGCTTAAAGATAG AACTGATTCTAGCTCAAACT
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MTELLAVEEINQRISQISDWKLEGNKLKYIKTVKNFVEAINFVNKLVAPAEASQHHPDLEVSYNKVTIILTTHNSGGLTE KDFKMAKTISGLS
Sequences:
>Translated_93_residues MTELLAVEEINQRISQISDWKLEGNKLKYIKTVKNFVEAINFVNKLVAPAEASQHHPDLEVSYNKVTIILTTHNSGGLTE KDFKMAKTISGLS >Mature_92_residues TELLAVEEINQRISQISDWKLEGNKLKYIKTVKNFVEAINFVNKLVAPAEASQHHPDLEVSYNKVTIILTTHNSGGLTEK DFKMAKTISGLS
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_TRIEI (Q116J2)
Other databases:
- EMBL: CP000393 - RefSeq: YP_721055.1 - ProteinModelPortal: Q116J2 - SMR: Q116J2 - STRING: Q116J2 - GeneID: 4242159 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_1232 - NMPDR: fig|203124.1.peg.1368 - eggNOG: COG2154 - HOGENOM: HBG705804 - OMA: LWTHAVG - ProtClustDB: PRK00823 - BioCyc: TERY203124:TERY_1232-MONOMER - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 10429; Mature: 10298
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELLAVEEINQRISQISDWKLEGNKLKYIKTVKNFVEAINFVNKLVAPAEASQHHPDLE CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE VSYNKVTIILTTHNSGGLTEKDFKMAKTISGLS EECCEEEEEEEECCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure TELLAVEEINQRISQISDWKLEGNKLKYIKTVKNFVEAINFVNKLVAPAEASQHHPDLE CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE VSYNKVTIILTTHNSGGLTEKDFKMAKTISGLS EECCEEEEEEEECCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA