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The map label for this gene is 113474996

Identifier: 113474996

GI number: 113474996

Start: 1911568

End: 1913487

Strand: Direct

Name: 113474996

Synonym: Tery_1234

Alternate gene names: NA

Gene position: 1911568-1913487 (Clockwise)

Preceding gene: 113474995

Following gene: 113474997

Centisome position: 24.67

GC content: 38.49

Gene sequence:

>1920_bases
ATGTCAAAAACATTCTGGTATTGTCTAATACTTAGTCCAGCAGTTTTAGGAGCAACTCTTGTTGCATCCTCATACGCTCT
GGCGACTGAAAACAAGCAAACTAATACAGTTATTCAGCCTCAAGCTGCAACAACTGAAAATATATCAATAAATAATAATA
TAGATATACAGGAACCTGATCTATTAGCTCAAGTTACTGCAACCAATTCGACTAATTCTGTTGGGAATACACCTGCAACT
ACCATACGACAAATTAACCGCTATGGTAGAGAAGGTCGTAATCTTCGTCGACCAGGTCTTCGTAATATTACGAACAATAG
GAAACCAATAAAAGGACAAGTTACTTCTGTATCTCAACTTTCTGATGTTCAGCCTACAGATTGGGCTTTTCAAGCATTAC
AGTCTTTGGTTGAGCGTTATGGATGTATCGTTGGATATCCAGATGGTACTTACAGAGGCAACCGTGCCTTAACTCGTTTT
GAATTTGCTGCTGGTGTTAATGCTTGCCTAGATAGAGTTATGGAACTTTTACAAGCAGCTATAGAAGATACCGTAAGTAG
AGAAGACCTGGCTATTCTGCAAAGGTTACAGGAGGAATTTTCTGCAGAATTAGCGATTCTCCGGGGTCGTGTTGATGCTC
TAGAAGCTCGTGCTGCTGAATTAGAGGCTAATCAATTTTCTACAACTACTAAACTTAGGGGTGAGGTAATTTTTGCCCTT
GTTGATAACTTTGAAGACCAAGGAAAATATGGAGCATTTGGTGATACTATCCAGGATGAGGATCAAACGGTATTCCAGTA
TAGGGTACGTCTGAATTTCAATACTAGCTTTTCTGGTGAAGACTTATTATTTACCAGGTTACAAGCGGGTAATGCTCAAG
CATTTAATCAAAAAATAGCTGAGTCTGAGGGACAGCAAACCTTTAATATTCTTGACCGTACAGATGATACGCTTCAACTA
GATAAGCTTTTCTACAAGTTCCCTGTCAGAGATAATATTAGAGTAACTATTGCTGCTAATAAGGTAAGTTGGTACGACTT
TGTTCCTACACTTAATCCTTATATGGAAGATTTTGATGGAGGCAGCGGTTCTCTAAGTGCTTTTGGTCAAAGAAACCCAA
TCTATAGGTTAGGGGGTGGTAAAGGACTTGGAGTTGAGTATGATTTTGGTTGTAAAGACCAATATGCTTGTACCTATAGT
CCATTTTCTGTATCTTTTGGATACTTAGCGGCAGAAGGTGAAAATCCTAGTCAAGGAAAAGGTCTGTTTAATGGAGACTA
TGCTGCACTAGCGCAACTAACCTTTACTCCCATCAGAAATTTCCAAGTTGGACTTACCTACAATAAAGGTTATTTTGGTC
CAGGGAACTTTGGATTTGATGATGGTGCAGCCACAGGTCTAGGTGATAATGGTAGTTTAAACAGTGGATTTGTAGGAACT
GGTATTGCTAACAGTGTTTATGGTTTAAATGCTGGACTTAATGATCGTCGACCAGGTTCTGTCAATATTAATAAGTCAGT
TTCGACTAATGCTTATGGTGTAGAAATGTCTTGGCGAGCAGCTGATTGGGTAACTATTAATGGTTTTGGTACATATCTTG
ATGGGAAACTAATTGGCAAAGGTGATTTTGAAATTTGGACTTATGGAGCTACTATTGCTTTCCCTGATTTATTGAAGGAA
GGTAGTCTGGCTGGTATTGTTGTAGGTCGGGAACCTTATTTGAATGACTTAGAACTTCCTAGTGGTTTAGATTCAGGATT
ACGACAAGATATGTCATGGCATCTTGAAGCATTCTACAAATATCAACTTACAGACTACATTTCAATTACTCCTGGTGTGA
CTGTAATTACAAATGCTAACCAAGATGATGATAACGATGAGTTAATTATTGGTACTATCAGAACTACTTTTCAGTTCTAG

Upstream 100 bases:

>100_bases
CGGGTTTATAAAGCAATAATTAACAATCCTACCCTATTAAAACTAACTAAACAAAAGAGCCAAATAGTCTCTCTATAATT
GGTGTGAGGATGAGAGAAAA

Downstream 100 bases:

>100_bases
TGGTTAGTTGGAAAGGTTAGGGTGGATAATACCACCCTATAAATTAATTAAATAGGACTTATTTGATATCCTCTCTGGCT
GTTAGCTACTGGAAAATAAA

Product: carbohydrate-selective porin OprB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 639; Mature: 638

Protein sequence:

>639_residues
MSKTFWYCLILSPAVLGATLVASSYALATENKQTNTVIQPQAATTENISINNNIDIQEPDLLAQVTATNSTNSVGNTPAT
TIRQINRYGREGRNLRRPGLRNITNNRKPIKGQVTSVSQLSDVQPTDWAFQALQSLVERYGCIVGYPDGTYRGNRALTRF
EFAAGVNACLDRVMELLQAAIEDTVSREDLAILQRLQEEFSAELAILRGRVDALEARAAELEANQFSTTTKLRGEVIFAL
VDNFEDQGKYGAFGDTIQDEDQTVFQYRVRLNFNTSFSGEDLLFTRLQAGNAQAFNQKIAESEGQQTFNILDRTDDTLQL
DKLFYKFPVRDNIRVTIAANKVSWYDFVPTLNPYMEDFDGGSGSLSAFGQRNPIYRLGGGKGLGVEYDFGCKDQYACTYS
PFSVSFGYLAAEGENPSQGKGLFNGDYAALAQLTFTPIRNFQVGLTYNKGYFGPGNFGFDDGAATGLGDNGSLNSGFVGT
GIANSVYGLNAGLNDRRPGSVNINKSVSTNAYGVEMSWRAADWVTINGFGTYLDGKLIGKGDFEIWTYGATIAFPDLLKE
GSLAGIVVGREPYLNDLELPSGLDSGLRQDMSWHLEAFYKYQLTDYISITPGVTVITNANQDDDNDELIIGTIRTTFQF

Sequences:

>Translated_639_residues
MSKTFWYCLILSPAVLGATLVASSYALATENKQTNTVIQPQAATTENISINNNIDIQEPDLLAQVTATNSTNSVGNTPAT
TIRQINRYGREGRNLRRPGLRNITNNRKPIKGQVTSVSQLSDVQPTDWAFQALQSLVERYGCIVGYPDGTYRGNRALTRF
EFAAGVNACLDRVMELLQAAIEDTVSREDLAILQRLQEEFSAELAILRGRVDALEARAAELEANQFSTTTKLRGEVIFAL
VDNFEDQGKYGAFGDTIQDEDQTVFQYRVRLNFNTSFSGEDLLFTRLQAGNAQAFNQKIAESEGQQTFNILDRTDDTLQL
DKLFYKFPVRDNIRVTIAANKVSWYDFVPTLNPYMEDFDGGSGSLSAFGQRNPIYRLGGGKGLGVEYDFGCKDQYACTYS
PFSVSFGYLAAEGENPSQGKGLFNGDYAALAQLTFTPIRNFQVGLTYNKGYFGPGNFGFDDGAATGLGDNGSLNSGFVGT
GIANSVYGLNAGLNDRRPGSVNINKSVSTNAYGVEMSWRAADWVTINGFGTYLDGKLIGKGDFEIWTYGATIAFPDLLKE
GSLAGIVVGREPYLNDLELPSGLDSGLRQDMSWHLEAFYKYQLTDYISITPGVTVITNANQDDDNDELIIGTIRTTFQF
>Mature_638_residues
SKTFWYCLILSPAVLGATLVASSYALATENKQTNTVIQPQAATTENISINNNIDIQEPDLLAQVTATNSTNSVGNTPATT
IRQINRYGREGRNLRRPGLRNITNNRKPIKGQVTSVSQLSDVQPTDWAFQALQSLVERYGCIVGYPDGTYRGNRALTRFE
FAAGVNACLDRVMELLQAAIEDTVSREDLAILQRLQEEFSAELAILRGRVDALEARAAELEANQFSTTTKLRGEVIFALV
DNFEDQGKYGAFGDTIQDEDQTVFQYRVRLNFNTSFSGEDLLFTRLQAGNAQAFNQKIAESEGQQTFNILDRTDDTLQLD
KLFYKFPVRDNIRVTIAANKVSWYDFVPTLNPYMEDFDGGSGSLSAFGQRNPIYRLGGGKGLGVEYDFGCKDQYACTYSP
FSVSFGYLAAEGENPSQGKGLFNGDYAALAQLTFTPIRNFQVGLTYNKGYFGPGNFGFDDGAATGLGDNGSLNSGFVGTG
IANSVYGLNAGLNDRRPGSVNINKSVSTNAYGVEMSWRAADWVTINGFGTYLDGKLIGKGDFEIWTYGATIAFPDLLKEG
SLAGIVVGREPYLNDLELPSGLDSGLRQDMSWHLEAFYKYQLTDYISITPGVTVITNANQDDDNDELIIGTIRTTFQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 70221; Mature: 70090

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTFWYCLILSPAVLGATLVASSYALATENKQTNTVIQPQAATTENISINNNIDIQEPD
CCCEEEEEEECCHHHHHHHHHHCCEEEEECCCCCCEEECCCCCCCCCEEECCCCCCCCCC
LLAQVTATNSTNSVGNTPATTIRQINRYGREGRNLRRPGLRNITNNRKPIKGQVTSVSQL
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCHHHH
SDVQPTDWAFQALQSLVERYGCIVGYPDGTYRGNRALTRFEFAAGVNACLDRVMELLQAA
CCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
IEDTVSREDLAILQRLQEEFSAELAILRGRVDALEARAAELEANQFSTTTKLRGEVIFAL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHCCEEEEEE
VDNFEDQGKYGAFGDTIQDEDQTVFQYRVRLNFNTSFSGEDLLFTRLQAGNAQAFNQKIA
ECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHH
ESEGQQTFNILDRTDDTLQLDKLFYKFPVRDNIRVTIAANKVSWYDFVPTLNPYMEDFDG
HCCCCCEEHHHCCCCCCEEHHHHHEECCCCCCEEEEEEECCEEEEECCCCCCHHHHHCCC
GSGSLSAFGQRNPIYRLGGGKGLGVEYDFGCKDQYACTYSPFSVSFGYLAAEGENPSQGK
CCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCEEEECCCEEEEEEEEECCCCCCCCC
GLFNGDYAALAQLTFTPIRNFQVGLTYNKGYFGPGNFGFDDGAATGLGDNGSLNSGFVGT
CCCCCCHHHHHEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
GIANSVYGLNAGLNDRRPGSVNINKSVSTNAYGVEMSWRAADWVTINGFGTYLDGKLIGK
CCCCCEEECCCCCCCCCCCCEEECCCCCCCEEEEEEEECEECEEEECCCEEEECCEEECC
GDFEIWTYGATIAFPDLLKEGSLAGIVVGREPYLNDLELPSGLDSGLRQDMSWHLEAFYK
CCEEEEEECCCEECHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEE
YQLTDYISITPGVTVITNANQDDDNDELIIGTIRTTFQF
EEEEEEEEECCCEEEEECCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure 
SKTFWYCLILSPAVLGATLVASSYALATENKQTNTVIQPQAATTENISINNNIDIQEPD
CCEEEEEEECCHHHHHHHHHHCCEEEEECCCCCCEEECCCCCCCCCEEECCCCCCCCCC
LLAQVTATNSTNSVGNTPATTIRQINRYGREGRNLRRPGLRNITNNRKPIKGQVTSVSQL
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCHHHH
SDVQPTDWAFQALQSLVERYGCIVGYPDGTYRGNRALTRFEFAAGVNACLDRVMELLQAA
CCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
IEDTVSREDLAILQRLQEEFSAELAILRGRVDALEARAAELEANQFSTTTKLRGEVIFAL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHCCEEEEEE
VDNFEDQGKYGAFGDTIQDEDQTVFQYRVRLNFNTSFSGEDLLFTRLQAGNAQAFNQKIA
ECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHH
ESEGQQTFNILDRTDDTLQLDKLFYKFPVRDNIRVTIAANKVSWYDFVPTLNPYMEDFDG
HCCCCCEEHHHCCCCCCEEHHHHHEECCCCCCEEEEEEECCEEEEECCCCCCHHHHHCCC
GSGSLSAFGQRNPIYRLGGGKGLGVEYDFGCKDQYACTYSPFSVSFGYLAAEGENPSQGK
CCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCEEEECCCEEEEEEEEECCCCCCCCC
GLFNGDYAALAQLTFTPIRNFQVGLTYNKGYFGPGNFGFDDGAATGLGDNGSLNSGFVGT
CCCCCCHHHHHEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
GIANSVYGLNAGLNDRRPGSVNINKSVSTNAYGVEMSWRAADWVTINGFGTYLDGKLIGK
CCCCCEEECCCCCCCCCCCCEEECCCCCCCEEEEEEEECEECEEEECCCEEEECCEEECC
GDFEIWTYGATIAFPDLLKEGSLAGIVVGREPYLNDLELPSGLDSGLRQDMSWHLEAFYK
CCEEEEEECCCEECHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEE
YQLTDYISITPGVTVITNANQDDDNDELIIGTIRTTFQF
EEEEEEEEECCCEEEEECCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]