| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113474918
Identifier: 113474918
GI number: 113474918
Start: 1802899
End: 1803066
Strand: Direct
Name: 113474918
Synonym: Tery_1144
Alternate gene names: NA
Gene position: 1802899-1803066 (Clockwise)
Preceding gene: 113474916
Following gene: 113474924
Centisome position: 23.26
GC content: 28.57
Gene sequence:
>168_bases ATGCTTAATTCTAAAGAAAAGCAAAAAGATTTAATTTTGATCACAGAAGTTAGTTGTATACCATTACAACAAAGTGTGAG ATATTTACAAACTGCTGTTACTAACTTTTTCAGTGGACATACCACATATCCTAACTTCAAAAAAAAAAAAGAAATAGTGG TAGTGTAG
Upstream 100 bases:
>100_bases TTCAGTTTGTGTAAGCCTTTTCTAAAATAAACTTTTAACAGCAAGAATTAATACATACCATGAGAATGAAGAACAAATAA GCTATCAACAAATCTCAACT
Downstream 100 bases:
>100_bases AATTAATAAAATCTGATTTTAAGTGGGAAAATAGTCAAGTTTATCTAGCCAAATGTTCTGAGCCACGACTTATAAAATGG AGCAGAAAATTACTGATTGG
Product: transposase, IS891/IS1136/IS1341
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MLNSKEKQKDLILITEVSCIPLQQSVRYLQTAVTNFFSGHTTYPNFKKKKEIVVV
Sequences:
>Translated_55_residues MLNSKEKQKDLILITEVSCIPLQQSVRYLQTAVTNFFSGHTTYPNFKKKKEIVVV >Mature_55_residues MLNSKEKQKDLILITEVSCIPLQQSVRYLQTAVTNFFSGHTTYPNFKKKKEIVVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6358; Mature: 6358
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNSKEKQKDLILITEVSCIPLQQSVRYLQTAVTNFFSGHTTYPNFKKKKEIVVV CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC >Mature Secondary Structure MLNSKEKQKDLILITEVSCIPLQQSVRYLQTAVTNFFSGHTTYPNFKKKKEIVVV CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA