| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is mreB [H]
Identifier: 113474924
GI number: 113474924
Start: 1808387
End: 1809424
Strand: Direct
Name: mreB [H]
Synonym: Tery_1150
Alternate gene names: 113474924
Gene position: 1808387-1809424 (Clockwise)
Preceding gene: 113474918
Following gene: 113474925
Centisome position: 23.33
GC content: 42.29
Gene sequence:
>1038_bases GTGGGTCTGATAAATCGCTTTTCCTTGTCTCGGGACATGGGAATTGACTTAGGTACTGCGAACACACTTGTATATGTATC TGGCAAAGGTATTGTTCTTCAGGAGCCATCTGTGGTAGCTATTGATCAGGAACAAAAAACTTCTATTGCAGTTGGGGAAG AAGCTAAAAGGATGTTAGGGCGAACTCCATCTAATGTAATTGCAATGAGACCTCTAAGGGATGGGGTCATAGCTGATTTT GATACAGCAGAATTAATGCTGAAACATTTTATCAGGCGAGTCCATGAAGGAAGAGCCTTAGTATCTCCAAGAATTGTTAT TGGTATTCCTAGCGGAGTAACTGGTGTAGAAAGACGAGCTGTAATGGAAGCCGCTGCTCAAGCTGGTGCTAGGGATGTAC GGTTAATTGATGAACCTGTTGCTGCTGCTATTGGGGCGGGGTTGCCTGTGGCCGAACCTACTGGCAATATGATTGTGGAT ATTGGTGGAGGAACTACAGAAGTTGCTGTTCTTAGTTTACAAGGTACAGTTCTAAGTGAGTCTGTGCGTGTAGCTGGGGA TGAATTGAATGATGCTGTTACTCAGTATATGAAAAAAGTTCATAACTTGGTCATAGGTGAGCGAACTGCAGAAGATATTA AGATTCAATTGGGTTCAGCTTATCCCTCTCAGGATGATAATGAGGCAACGATGGAAGTTAGGGGTCTACATTTATTATCA GGTTTGCCTAGAATTGTTACAGTCAAAGCTGCTGAAATTCGAGAAAGTCTAATTGAACCTTTATCTATAGTTGTAGACGC AGTTAAGCGAACTTTGGAACGTACTCCTCCTGAACTAGCCGCAGATATTATAGATAGGGGTATTATGTTAGCTGGTGGTG GTGCTTTGTTAAAGGGGATAGATACTTTAATTAGCCATGAAACTGGTATTGTCACTCATATTGCTGCAGACCCTCTTTGT TGTGTAGTGTTGGGCACTGGCCGTGTTTTAGAGAATTTTAAACAGCTTGAAAGGTTTTTCAGTGGGCCAGTTCGCTAA
Upstream 100 bases:
>100_bases ATACTGAGGAATAAAAAACAATATAAAATTTACCTCAGATATATGTATTTATAAATTATTACATCAAGAATTAAGATTTG ATATTGGGGGTCAAAATCTA
Downstream 100 bases:
>100_bases AGTCAATATATGTTATTTAAGTATCGACGAGGAGGCAATTCTTGTCTAGTTTCTTTGATGAGAACTAAAGATTATTATTA GTTAGGATTTACGCACTTCA
Product: rod shape-determining protein MreB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MGLINRFSLSRDMGIDLGTANTLVYVSGKGIVLQEPSVVAIDQEQKTSIAVGEEAKRMLGRTPSNVIAMRPLRDGVIADF DTAELMLKHFIRRVHEGRALVSPRIVIGIPSGVTGVERRAVMEAAAQAGARDVRLIDEPVAAAIGAGLPVAEPTGNMIVD IGGGTTEVAVLSLQGTVLSESVRVAGDELNDAVTQYMKKVHNLVIGERTAEDIKIQLGSAYPSQDDNEATMEVRGLHLLS GLPRIVTVKAAEIRESLIEPLSIVVDAVKRTLERTPPELAADIIDRGIMLAGGGALLKGIDTLISHETGIVTHIAADPLC CVVLGTGRVLENFKQLERFFSGPVR
Sequences:
>Translated_345_residues MGLINRFSLSRDMGIDLGTANTLVYVSGKGIVLQEPSVVAIDQEQKTSIAVGEEAKRMLGRTPSNVIAMRPLRDGVIADF DTAELMLKHFIRRVHEGRALVSPRIVIGIPSGVTGVERRAVMEAAAQAGARDVRLIDEPVAAAIGAGLPVAEPTGNMIVD IGGGTTEVAVLSLQGTVLSESVRVAGDELNDAVTQYMKKVHNLVIGERTAEDIKIQLGSAYPSQDDNEATMEVRGLHLLS GLPRIVTVKAAEIRESLIEPLSIVVDAVKRTLERTPPELAADIIDRGIMLAGGGALLKGIDTLISHETGIVTHIAADPLC CVVLGTGRVLENFKQLERFFSGPVR >Mature_344_residues GLINRFSLSRDMGIDLGTANTLVYVSGKGIVLQEPSVVAIDQEQKTSIAVGEEAKRMLGRTPSNVIAMRPLRDGVIADFD TAELMLKHFIRRVHEGRALVSPRIVIGIPSGVTGVERRAVMEAAAQAGARDVRLIDEPVAAAIGAGLPVAEPTGNMIVDI GGGTTEVAVLSLQGTVLSESVRVAGDELNDAVTQYMKKVHNLVIGERTAEDIKIQLGSAYPSQDDNEATMEVRGLHLLSG LPRIVTVKAAEIRESLIEPLSIVVDAVKRTLERTPPELAADIIDRGIMLAGGGALLKGIDTLISHETGIVTHIAADPLCC VVLGTGRVLENFKQLERFFSGPVR
Specific function: Involved in formation of the rod shape of the cell [H]
COG id: COG1077
COG function: function code D; Actin-like ATPase involved in cell morphogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsA/mreB family [H]
Homologues:
Organism=Escherichia coli, GI87082236, Length=331, Percent_Identity=55.8912386706949, Blast_Score=352, Evalue=2e-98, Organism=Escherichia coli, GI1786870, Length=196, Percent_Identity=29.5918367346939, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004753 [H]
Pfam domain/function: PF06723 MreB_Mbl [H]
EC number: NA
Molecular weight: Translated: 36727; Mature: 36596
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLINRFSLSRDMGIDLGTANTLVYVSGKGIVLQEPSVVAIDQEQKTSIAVGEEAKRMLG CCCCHHHCCCCCCCCEECCCCEEEEECCCEEEEECCCEEEECCCCCCCEEECHHHHHHHC RTPSNVIAMRPLRDGVIADFDTAELMLKHFIRRVHEGRALVSPRIVIGIPSGVTGVERRA CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCHHHHHH VMEAAAQAGARDVRLIDEPVAAAIGAGLPVAEPTGNMIVDIGGGTTEVAVLSLQGTVLSE HHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEEECCHHHHH SVRVAGDELNDAVTQYMKKVHNLVIGERTAEDIKIQLGSAYPSQDDNEATMEVRGLHLLS HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHC GLPRIVTVKAAEIRESLIEPLSIVVDAVKRTLERTPPELAADIIDRGIMLAGGGALLKGI CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCHHHHHHH DTLISHETGIVTHIAADPLCCVVLGTGRVLENFKQLERFFSGPVR HHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GLINRFSLSRDMGIDLGTANTLVYVSGKGIVLQEPSVVAIDQEQKTSIAVGEEAKRMLG CCCHHHCCCCCCCCEECCCCEEEEECCCEEEEECCCEEEECCCCCCCEEECHHHHHHHC RTPSNVIAMRPLRDGVIADFDTAELMLKHFIRRVHEGRALVSPRIVIGIPSGVTGVERRA CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCHHHHHH VMEAAAQAGARDVRLIDEPVAAAIGAGLPVAEPTGNMIVDIGGGTTEVAVLSLQGTVLSE HHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEEECCHHHHH SVRVAGDELNDAVTQYMKKVHNLVIGERTAEDIKIQLGSAYPSQDDNEATMEVRGLHLLS HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHC GLPRIVTVKAAEIRESLIEPLSIVVDAVKRTLERTPPELAADIIDRGIMLAGGGALLKGI CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCHHHHHHH DTLISHETGIVTHIAADPLCCVVLGTGRVLENFKQLERFFSGPVR HHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400225; 1400224; 9384377; 8387996 [H]