| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474903
Identifier: 113474903
GI number: 113474903
Start: 1784286
End: 1785884
Strand: Reverse
Name: 113474903
Synonym: Tery_1129
Alternate gene names: NA
Gene position: 1785884-1784286 (Counterclockwise)
Preceding gene: 113474904
Following gene: 113474902
Centisome position: 23.04
GC content: 29.02
Gene sequence:
>1599_bases GTGAAAGAAAAAGTAACGCAATTGGAAACTAAATTAAATCAAACTGTTTCTGAAAAGATAGAGAGTTTAGAAATTTCATT GGCAGAGGAGTTAAGCCTATCAAATAAGGTGAGAAATTCAGAAAATTATCAAGAACTTTACAGACAGCCACCCCCTGGTA GAGCCTCTCAATCAAAAATTGATAGAATTAATAATATTTATTGGAAATTTAAGAATGAAGTTAAGTATCAAGAAAAATAT GTAGATCAAGCACAAGGGAATTTAGAGAAAATAAAAGGTAGTATTAGGTCTATTGGTGAAGACCTTGATAGTTTGATATC TGAGCTAGAAAATATATGCAGTTTAGCCAATAATAATCAAGAAGTTGGCGATGAAAAATATTTAGCTAAAAAGAATGAGT ATTGTAATAAATTAAGAGATATTTATTTGCCACTAAAAGAGTCTACAAATTCAAGCTCAAATAACTTTAAAATTTTTAGT AATAATTTAATAAGGATTGAAGAAAATGTTTCAGATGCCAAAAGATTTCTTCCTTCTTGGAATAATTGGCTAGCTGCACA AAAAAAGGTTGTAGATACTAGATTAATTACTAGAGAACAGATAGATAATTGGATAGAATGTGCGAATCGTGAGTTGGATT TTGTTGATCAAACAATTGATAATATAGACAGTGTTATACAAACAATTCCACAAGAAAAATCAGAGCTTATTCGTAAGATT AAAACTATAGAAAAAGAATCTGACAATTTTGAGCTTCAGATTAGTGAATATGAAAACGTGAAAAGTTTGACATTAAATAA GGAAATTATTAGTGGTACAGAAAATAATTTATTCCTCATAAATGATTTATTTGATCAAATTTCTCAAGCTGAAAAAAAGA CTAAAATTTTAGTTGATAATTTAAGAAAGGAATCTGATAAAATAGAGGATAGAATCACACCCCTTAATAACTTATATTTT GAAGGTCGCGATCTTCTGAAAGCTCCAAGATTTACTCAGGGGGCATTAAGTCAAAAACCTAATCTTCAAAGAAGGGTAGA AAATGTTAATAATTTCAGGGTTAATGAACTTCCTTCTTTGAAAGAAAAAATACAGAATGAACTTGATAGTTATAAGTCTC TGCAAAAGTCAATATTTCAGAAGTTAGGAGAAACTCGGTTATCAGTTAAAAATACCCAGGAGAGGTTTGAATACTTGAAC AAAAGTATAGAAAAACGGCGTTTTATATCTACTATCCAATGGTCTGCTATCTTAGTAGTAATTGTAGCAGTTGTGATTAC TATAGGTTACCACTTATATAGAAAAAGAATTTTGAGAAAACTAAACTGTCTTGATTATAAGAATTTAAAGAAACTACTTG CTAGGATTAAGGATACTAAAGAATCTTTCACAATTAGACTAGAAGCAATAAAACTAATCTACGAACATCAAAATAATTTT AATATTGACAAATTAGAATCATTAGTAAAACAACTAAAAGATACGGTAAAACAGATGGAAAAGTTTAAATATGATGATGA TATAAAAGTTATTGGGGAGCTCAGAAAAGTAACAGAGTCTCTTGAGCTACGTCTAATGGAAAAGCGGAGTTTTAAATAA
Upstream 100 bases:
>100_bases CTGGAAAAATCCAATTATTATTATATTATTAGTATTTTGTATACTTGCTGTCCGTCAACTGTATCAACCTCCATAATTTA GTTTATCAGAGCTTGAATTA
Downstream 100 bases:
>100_bases CTTAGAAATTAAAGACTGAAACATAGATAATTGACTATTAGGCTGATTAAATTCAAATAGAATTGTACATACTTCAAACA ACATAATATATAAGGAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MKEKVTQLETKLNQTVSEKIESLEISLAEELSLSNKVRNSENYQELYRQPPPGRASQSKIDRINNIYWKFKNEVKYQEKY VDQAQGNLEKIKGSIRSIGEDLDSLISELENICSLANNNQEVGDEKYLAKKNEYCNKLRDIYLPLKESTNSSSNNFKIFS NNLIRIEENVSDAKRFLPSWNNWLAAQKKVVDTRLITREQIDNWIECANRELDFVDQTIDNIDSVIQTIPQEKSELIRKI KTIEKESDNFELQISEYENVKSLTLNKEIISGTENNLFLINDLFDQISQAEKKTKILVDNLRKESDKIEDRITPLNNLYF EGRDLLKAPRFTQGALSQKPNLQRRVENVNNFRVNELPSLKEKIQNELDSYKSLQKSIFQKLGETRLSVKNTQERFEYLN KSIEKRRFISTIQWSAILVVIVAVVITIGYHLYRKRILRKLNCLDYKNLKKLLARIKDTKESFTIRLEAIKLIYEHQNNF NIDKLESLVKQLKDTVKQMEKFKYDDDIKVIGELRKVTESLELRLMEKRSFK
Sequences:
>Translated_532_residues MKEKVTQLETKLNQTVSEKIESLEISLAEELSLSNKVRNSENYQELYRQPPPGRASQSKIDRINNIYWKFKNEVKYQEKY VDQAQGNLEKIKGSIRSIGEDLDSLISELENICSLANNNQEVGDEKYLAKKNEYCNKLRDIYLPLKESTNSSSNNFKIFS NNLIRIEENVSDAKRFLPSWNNWLAAQKKVVDTRLITREQIDNWIECANRELDFVDQTIDNIDSVIQTIPQEKSELIRKI KTIEKESDNFELQISEYENVKSLTLNKEIISGTENNLFLINDLFDQISQAEKKTKILVDNLRKESDKIEDRITPLNNLYF EGRDLLKAPRFTQGALSQKPNLQRRVENVNNFRVNELPSLKEKIQNELDSYKSLQKSIFQKLGETRLSVKNTQERFEYLN KSIEKRRFISTIQWSAILVVIVAVVITIGYHLYRKRILRKLNCLDYKNLKKLLARIKDTKESFTIRLEAIKLIYEHQNNF NIDKLESLVKQLKDTVKQMEKFKYDDDIKVIGELRKVTESLELRLMEKRSFK >Mature_532_residues MKEKVTQLETKLNQTVSEKIESLEISLAEELSLSNKVRNSENYQELYRQPPPGRASQSKIDRINNIYWKFKNEVKYQEKY VDQAQGNLEKIKGSIRSIGEDLDSLISELENICSLANNNQEVGDEKYLAKKNEYCNKLRDIYLPLKESTNSSSNNFKIFS NNLIRIEENVSDAKRFLPSWNNWLAAQKKVVDTRLITREQIDNWIECANRELDFVDQTIDNIDSVIQTIPQEKSELIRKI KTIEKESDNFELQISEYENVKSLTLNKEIISGTENNLFLINDLFDQISQAEKKTKILVDNLRKESDKIEDRITPLNNLYF EGRDLLKAPRFTQGALSQKPNLQRRVENVNNFRVNELPSLKEKIQNELDSYKSLQKSIFQKLGETRLSVKNTQERFEYLN KSIEKRRFISTIQWSAILVVIVAVVITIGYHLYRKRILRKLNCLDYKNLKKLLARIKDTKESFTIRLEAIKLIYEHQNNF NIDKLESLVKQLKDTVKQMEKFKYDDDIKVIGELRKVTESLELRLMEKRSFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62573; Mature: 62573
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKVTQLETKLNQTVSEKIESLEISLAEELSLSNKVRNSENYQELYRQPPPGRASQSKI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHH DRINNIYWKFKNEVKYQEKYVDQAQGNLEKIKGSIRSIGEDLDSLISELENICSLANNNQ HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EVGDEKYLAKKNEYCNKLRDIYLPLKESTNSSSNNFKIFSNNLIRIEENVSDAKRFLPSW CCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEECCEEEEECCHHHHHHHCCCH NNWLAAQKKVVDTRLITREQIDNWIECANRELDFVDQTIDNIDSVIQTIPQEKSELIRKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KTIEKESDNFELQISEYENVKSLTLNKEIISGTENNLFLINDLFDQISQAEKKTKILVDN HHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH LRKESDKIEDRITPLNNLYFEGRDLLKAPRFTQGALSQKPNLQRRVENVNNFRVNELPSL HHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCHH KEKIQNELDSYKSLQKSIFQKLGETRLSVKNTQERFEYLNKSIEKRRFISTIQWSAILVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAVVITIGYHLYRKRILRKLNCLDYKNLKKLLARIKDTKESFTIRLEAIKLIYEHQNNF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC NIDKLESLVKQLKDTVKQMEKFKYDDDIKVIGELRKVTESLELRLMEKRSFK CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKEKVTQLETKLNQTVSEKIESLEISLAEELSLSNKVRNSENYQELYRQPPPGRASQSKI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHH DRINNIYWKFKNEVKYQEKYVDQAQGNLEKIKGSIRSIGEDLDSLISELENICSLANNNQ HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EVGDEKYLAKKNEYCNKLRDIYLPLKESTNSSSNNFKIFSNNLIRIEENVSDAKRFLPSW CCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEECCEEEEECCHHHHHHHCCCH NNWLAAQKKVVDTRLITREQIDNWIECANRELDFVDQTIDNIDSVIQTIPQEKSELIRKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KTIEKESDNFELQISEYENVKSLTLNKEIISGTENNLFLINDLFDQISQAEKKTKILVDN HHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH LRKESDKIEDRITPLNNLYFEGRDLLKAPRFTQGALSQKPNLQRRVENVNNFRVNELPSL HHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCHH KEKIQNELDSYKSLQKSIFQKLGETRLSVKNTQERFEYLNKSIEKRRFISTIQWSAILVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAVVITIGYHLYRKRILRKLNCLDYKNLKKLLARIKDTKESFTIRLEAIKLIYEHQNNF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCC NIDKLESLVKQLKDTVKQMEKFKYDDDIKVIGELRKVTESLELRLMEKRSFK CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA