Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474904

Identifier: 113474904

GI number: 113474904

Start: 1785909

End: 1786274

Strand: Reverse

Name: 113474904

Synonym: Tery_1130

Alternate gene names: NA

Gene position: 1786274-1785909 (Counterclockwise)

Preceding gene: 113474905

Following gene: 113474903

Centisome position: 23.05

GC content: 30.05

Gene sequence:

>366_bases
TTGGAGATGTATAATCAGCGATCGCTCACTAAAAATTCTTTTTGGAATTGGTTTTTTTGTATAACTTTACCTTTAGCTTT
TGGATATACTTTAACTACTTTTATTGCCCTAGTATATCTTTGGCTATTATGGTTTCTTTTTCAGGAAAGCCAAAGTAGAA
TTGTTATGCTTTTACCGTTTGTCTATTGTATTTTTGCTTTAGCCTATTCAATATTTGCTTATTTCAGATCGGGAATAGCT
ATTCCTAAGTCAATTATAGTTGGATGGCATTATTATGTTGCTAAATTTTGCTGGAAAAATCCAATTATTATTATATTATT
AGTATTTTGTATACTTGCTGTCCGTCAACTGTATCAACCTCCATAA

Upstream 100 bases:

>100_bases
TGGATAATTATGCTGCAATATTTGTTAAGAAATTCTGTTCGTTTTGAATTATATCTAAAAGTTTATAACGGTTTTTCTAC
AGCAATTTATAGAGGTTTAA

Downstream 100 bases:

>100_bases
TTTAGTTTATCAGAGCTTGAATTAGTGAAAGAAAAAGTAACGCAATTGGAAACTAAATTAAATCAAACTGTTTCTGAAAA
GATAGAGAGTTTAGAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MEMYNQRSLTKNSFWNWFFCITLPLAFGYTLTTFIALVYLWLLWFLFQESQSRIVMLLPFVYCIFALAYSIFAYFRSGIA
IPKSIIVGWHYYVAKFCWKNPIIIILLVFCILAVRQLYQPP

Sequences:

>Translated_121_residues
MEMYNQRSLTKNSFWNWFFCITLPLAFGYTLTTFIALVYLWLLWFLFQESQSRIVMLLPFVYCIFALAYSIFAYFRSGIA
IPKSIIVGWHYYVAKFCWKNPIIIILLVFCILAVRQLYQPP
>Mature_121_residues
MEMYNQRSLTKNSFWNWFFCITLPLAFGYTLTTFIALVYLWLLWFLFQESQSRIVMLLPFVYCIFALAYSIFAYFRSGIA
IPKSIIVGWHYYVAKFCWKNPIIIILLVFCILAVRQLYQPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14480; Mature: 14480

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMYNQRSLTKNSFWNWFFCITLPLAFGYTLTTFIALVYLWLLWFLFQESQSRIVMLLPF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VYCIFALAYSIFAYFRSGIAIPKSIIVGWHYYVAKFCWKNPIIIILLVFCILAVRQLYQP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
P
C
>Mature Secondary Structure
MEMYNQRSLTKNSFWNWFFCITLPLAFGYTLTTFIALVYLWLLWFLFQESQSRIVMLLPF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VYCIFALAYSIFAYFRSGIAIPKSIIVGWHYYVAKFCWKNPIIIILLVFCILAVRQLYQP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA