| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113474890
Identifier: 113474890
GI number: 113474890
Start: 1758177
End: 1758362
Strand: Reverse
Name: 113474890
Synonym: Tery_1116
Alternate gene names: NA
Gene position: 1758362-1758177 (Counterclockwise)
Preceding gene: 113474892
Following gene: 113474889
Centisome position: 22.69
GC content: 32.26
Gene sequence:
>186_bases ATGGTTGCAAACAGTGTCTATGAAAATAATGATTTAAGATTTGAAACAACTGCAACAGTAGAATTAATTATTAGATTACC TACAGGAGGAAATACAGGAGAAAGGAACTCCGATCTAAATTTTCAACTAAGAGCATGGAAGCGTCAAAATAACCAGGACT TACGTAAAGACTCTATATATATATAG
Upstream 100 bases:
>100_bases AAGATTACCATAAGAATGTTAAAGGAGGCAAAGTCATGGAAACATTGACAATTTATTGACCAGCTAGGTTAGAATTAAAA ATCTATCTTACCCAATTACA
Downstream 100 bases:
>100_bases TAGATAAGAATTATGATATGTCTGTACTTAGTTAGTAAATTTGAGCAGTGCCATAAAGCTATATTATACTATCCTCAGAC TTTATTGCATGAAGGTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MVANSVYENNDLRFETTATVELIIRLPTGGNTGERNSDLNFQLRAWKRQNNQDLRKDSIYI
Sequences:
>Translated_61_residues MVANSVYENNDLRFETTATVELIIRLPTGGNTGERNSDLNFQLRAWKRQNNQDLRKDSIYI >Mature_61_residues MVANSVYENNDLRFETTATVELIIRLPTGGNTGERNSDLNFQLRAWKRQNNQDLRKDSIYI
Specific function: Unknown
COG id: COG4636
COG function: function code S; Uncharacterized protein conserved in cyanobacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7101; Mature: 7101
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVANSVYENNDLRFETTATVELIIRLPTGGNTGERNSDLNFQLRAWKRQNNQDLRKDSIY CCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC I C >Mature Secondary Structure MVANSVYENNDLRFETTATVELIIRLPTGGNTGERNSDLNFQLRAWKRQNNQDLRKDSIY CCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA