Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474892

Identifier: 113474892

GI number: 113474892

Start: 1760505

End: 1761014

Strand: Reverse

Name: 113474892

Synonym: Tery_1118

Alternate gene names: NA

Gene position: 1761014-1760505 (Counterclockwise)

Preceding gene: 113474893

Following gene: 113474890

Centisome position: 22.72

GC content: 38.82

Gene sequence:

>510_bases
ATGAAACGTACAAATCAAACCACCAGCCAAGTATCCAGATTTAATTATGCTACTCTGGCAATTTTAGGCGGAGTATTTGT
TTTGGGTATTGGCATTGGCATCGCCTTTAGCTCCACTGCTAATTTTACCCCACAAAATATGGCCTCTAGTGAATTTATAG
ATCGCAGCGTACCTAACCCCGAAATTTGTGTACAGTTTGGAGCTAGCGCAATGGTAATGAATATGCGCGTTTTCTTGACT
TTAAATCCTTTTAATGTATATGTATCTCAGCCTGGTTTGAAACCAGGATGTGTCATCCGCAGAAGTAACTGGGAAATTCT
ACAACAAAGAAAATTAGTCAACAATGAGCAAGTGCGTGACTGTAAAAACCGGATGAATACCTTTGGGTATACAGGAAATA
TTAACGATGAACCAGAGATTGATTGCATTTATCAAAATGACAGCGCTCAAAACCTATTCTTTAAAAATATGGGGCCCGGG
TTTGCTCCACCTGAAAATAATAATTTCTAG

Upstream 100 bases:

>100_bases
CTGTATGTTAGAAAAAACATACATCTAGCTTTTCCCATTATTAATGGCCCAATAGTTGCTCTGCTCAGATAATTTCAAAT
ATAATAACACTTCGATATAT

Downstream 100 bases:

>100_bases
CTGATATACCATTCTTACCTAAAAATTGAGCTTAAAGCTCGACTCACCCATAGGAAGACTATTTGTTTTTTTTTGAATAT
ATATGTTATAATATAATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKRTNQTTSQVSRFNYATLAILGGVFVLGIGIGIAFSSTANFTPQNMASSEFIDRSVPNPEICVQFGASAMVMNMRVFLT
LNPFNVYVSQPGLKPGCVIRRSNWEILQQRKLVNNEQVRDCKNRMNTFGYTGNINDEPEIDCIYQNDSAQNLFFKNMGPG
FAPPENNNF

Sequences:

>Translated_169_residues
MKRTNQTTSQVSRFNYATLAILGGVFVLGIGIGIAFSSTANFTPQNMASSEFIDRSVPNPEICVQFGASAMVMNMRVFLT
LNPFNVYVSQPGLKPGCVIRRSNWEILQQRKLVNNEQVRDCKNRMNTFGYTGNINDEPEIDCIYQNDSAQNLFFKNMGPG
FAPPENNNF
>Mature_169_residues
MKRTNQTTSQVSRFNYATLAILGGVFVLGIGIGIAFSSTANFTPQNMASSEFIDRSVPNPEICVQFGASAMVMNMRVFLT
LNPFNVYVSQPGLKPGCVIRRSNWEILQQRKLVNNEQVRDCKNRMNTFGYTGNINDEPEIDCIYQNDSAQNLFFKNMGPG
FAPPENNNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18921; Mature: 18921

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTNQTTSQVSRFNYATLAILGGVFVLGIGIGIAFSSTANFTPQNMASSEFIDRSVPNP
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCCCH
EICVQFGASAMVMNMRVFLTLNPFNVYVSQPGLKPGCVIRRSNWEILQQRKLVNNEQVRD
HHEEEECCCEEEEEEEEEEEECCEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCHHHHH
CKNRMNTFGYTGNINDEPEIDCIYQNDSAQNLFFKNMGPGFAPPENNNF
HHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKRTNQTTSQVSRFNYATLAILGGVFVLGIGIGIAFSSTANFTPQNMASSEFIDRSVPNP
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCCCH
EICVQFGASAMVMNMRVFLTLNPFNVYVSQPGLKPGCVIRRSNWEILQQRKLVNNEQVRD
HHEEEECCCEEEEEEEEEEEECCEEEEEECCCCCCCEEEECCCHHHHHHHHHCCCHHHHH
CKNRMNTFGYTGNINDEPEIDCIYQNDSAQNLFFKNMGPGFAPPENNNF
HHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA