| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is ppk [H]
Identifier: 113474889
GI number: 113474889
Start: 1753871
End: 1756033
Strand: Reverse
Name: ppk [H]
Synonym: Tery_1114
Alternate gene names: 113474889
Gene position: 1756033-1753871 (Counterclockwise)
Preceding gene: 113474890
Following gene: 113474885
Centisome position: 22.66
GC content: 36.52
Gene sequence:
>2163_bases ATGTCCAAAAACAAAAAGAATACAGTAGAAACTCCTATCGAAAAAAAACTTAGTAATCCACAATACTACTTTAATAGAGA ATTGAGTTGGTTAGAGTTTAACCGTAGGGTTTTATCTGAAGGTTTAGACCCCCGTACTCCCCTATTAGAACGTTTAAAAT TTTTAGGAATTTTTAGTTCTAACTTAGATGAATATTTTATGGTTAGGGTAGCAGTTCTTAAAAAACAAATAGAAGCTGAA GTGCATAAGTTAACTCCAGACGGTCGTACTCCTCAAGAACAACTAGATGAGATTAATCAAATACTATTACCAATGGTTTC TTTACAACACCAATTCTTTGAGCAAAACTTACGACCAGAGTTAAGAAAAAATGGTATTGATATCCTAAATTATATAGACT TAGATAGAGAAGAAAAAACATATCTAAGAAACTATTTTGAAGAACACATATTTCCCGTACTTACTCCTCTAGCTATTGAT GCTAGTCATCCTTTTCCTTATTTATCTAATCTCAGTTTTAACTTAGCAGTAATGCTGAAAAATCCAGATACTCAAGAAGA TTTATTAGCCAGAATTAAAGTTCCCAAAATATTACCTCGCTTTTTGTGCTTACCAGAAAAATTACAAATAGAACAAAAGG CTAAAACTCTAAATTGGACAGGAGTTCCTCTCGAACAAGTCATTGCTCACAATTTGGGAGCTCTGTTTCCTGGTATGGAT ATTCAGGAGTATCACGTATTTCGGATTACTCGTGATGCTGACTTGGCAGTGCAAGAAGATGAGGGAGATGACTTGCTCTT AGTGATTGAGAAAGAACTCAGAAAACAGCGTATAGGTGGTACCGTAGTTAGAATGGAAATTAATCCAACAATGCCAAGTA AATTAAAAAAGACATTAATGGACAACTTGGAGTTATCAGAAAAAGACGTTTACACAGTAGATGGATTACTTGATTTAAAA GATTTAATGTCATTTTTAGGGTTGCCGTTGCCTCATCTTAAAGATCCAACTTGGACATCTACTATGCCACCAAGGTTGCG ACATTATGGTGATGAGCTCAGAATTCCTGACCTGAATGAGAATAACAAAATTGATTTTTTTGAAGTGATTCGCCAGAAAG ACTTATTGTTACATCATCCATATCATTCTTTTGCAAGTACGGTACAAGGTTTCATTAGTCAAGCAGCACACGATCCTAAT GTATTGGCGATTAAGATGACTCTTTATCGGACTTCTGGAAATTCACCTATTGTTAATGCTTTAATTGCTGCAGCTGAAAA CGATAAACAAGTTGCAGTATTGGTGGAATTGAAGGCAAGATTTGATGAAGAAAATAATATTCAATGGGCGCGGAAGTTAG AACAATATGGTGTTCATGTGGTTTATGGTTTAGCAGGTCTGAAGACTCATACTAAAATTGTGATGGTGGTCCGTCAGGAA GAAGGTCATATCCGTCGCTATGTTCATATTGGCACTGGTAACTATAATCCCAAGACTGCTAAAATTTATACTGATTTGGG TTTGTTGAGTTGTCGACCAGAATTAGGAGCAGATTTGGCAGATTTGTTTAATTTCTTGACGGGATATTCTCGTCAGCAGT CTTACCGGAAATTGTTGGTGGCACCTGTAAATATGCGCGATCGCTTTATGAAACTGATTCGTCGGGAAATTGAAAATTGC CAAAATGGAGATACAGGTCGTATAGTTGCCCAGATGAACTCTTTGGTAGATCCTAAAATTATTACTTCTTTGTATAAAGC GTCCCAAGTAGGGGTGAAAATTGATTTGATTGTCCGTGGTATTTGTTGTTTGCGTCCGGGTTTAAAAGGTATCAGTGATA ATATTAAGGTGGTGAGTATTATTGGGCGTTATTTAGAACACTCTCGGGTTTTCTACTTCTATAATAAAGGTAAAGAGGAG GTGTATATTGGTTCTGCTGATTGGATGCCTCGTAATCTCGATCGTCGGATAGAGGCTATTATACCTGTGGAAGACTCTGA AATCACAAAAGAGTTGCAAGAAATTATGGGCATTCTGTTATCTGACAACCGACAAGCTTGGGATCTACAACCAGATGGTA AGTATATTCAGCGTCGTTCTACTGAGAATTTTCCTGAACTTGCCTGCCATAAAATTTTGATGGAAACCGTAGCTAATACT TAG
Upstream 100 bases:
>100_bases TTATAATTAATTACACAACCAATTCATAGAAAAAAAATATACTTTACAAGTAATAAAGACTAGCTTACAATCAATATAAA TTTAAATCCATATTATAATT
Downstream 100 bases:
>100_bases GGTTTAGTCTTCTTTGTCTTTTTCAAGAGTAGGAGATCTACCCCTATAGAGAAATGGGAAAGTAGGGGAGTGGGTAGAGA TATTAAAGTTGTTGGGAAAT
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 720; Mature: 719
Protein sequence:
>720_residues MSKNKKNTVETPIEKKLSNPQYYFNRELSWLEFNRRVLSEGLDPRTPLLERLKFLGIFSSNLDEYFMVRVAVLKKQIEAE VHKLTPDGRTPQEQLDEINQILLPMVSLQHQFFEQNLRPELRKNGIDILNYIDLDREEKTYLRNYFEEHIFPVLTPLAID ASHPFPYLSNLSFNLAVMLKNPDTQEDLLARIKVPKILPRFLCLPEKLQIEQKAKTLNWTGVPLEQVIAHNLGALFPGMD IQEYHVFRITRDADLAVQEDEGDDLLLVIEKELRKQRIGGTVVRMEINPTMPSKLKKTLMDNLELSEKDVYTVDGLLDLK DLMSFLGLPLPHLKDPTWTSTMPPRLRHYGDELRIPDLNENNKIDFFEVIRQKDLLLHHPYHSFASTVQGFISQAAHDPN VLAIKMTLYRTSGNSPIVNALIAAAENDKQVAVLVELKARFDEENNIQWARKLEQYGVHVVYGLAGLKTHTKIVMVVRQE EGHIRRYVHIGTGNYNPKTAKIYTDLGLLSCRPELGADLADLFNFLTGYSRQQSYRKLLVAPVNMRDRFMKLIRREIENC QNGDTGRIVAQMNSLVDPKIITSLYKASQVGVKIDLIVRGICCLRPGLKGISDNIKVVSIIGRYLEHSRVFYFYNKGKEE VYIGSADWMPRNLDRRIEAIIPVEDSEITKELQEIMGILLSDNRQAWDLQPDGKYIQRRSTENFPELACHKILMETVANT
Sequences:
>Translated_720_residues MSKNKKNTVETPIEKKLSNPQYYFNRELSWLEFNRRVLSEGLDPRTPLLERLKFLGIFSSNLDEYFMVRVAVLKKQIEAE VHKLTPDGRTPQEQLDEINQILLPMVSLQHQFFEQNLRPELRKNGIDILNYIDLDREEKTYLRNYFEEHIFPVLTPLAID ASHPFPYLSNLSFNLAVMLKNPDTQEDLLARIKVPKILPRFLCLPEKLQIEQKAKTLNWTGVPLEQVIAHNLGALFPGMD IQEYHVFRITRDADLAVQEDEGDDLLLVIEKELRKQRIGGTVVRMEINPTMPSKLKKTLMDNLELSEKDVYTVDGLLDLK DLMSFLGLPLPHLKDPTWTSTMPPRLRHYGDELRIPDLNENNKIDFFEVIRQKDLLLHHPYHSFASTVQGFISQAAHDPN VLAIKMTLYRTSGNSPIVNALIAAAENDKQVAVLVELKARFDEENNIQWARKLEQYGVHVVYGLAGLKTHTKIVMVVRQE EGHIRRYVHIGTGNYNPKTAKIYTDLGLLSCRPELGADLADLFNFLTGYSRQQSYRKLLVAPVNMRDRFMKLIRREIENC QNGDTGRIVAQMNSLVDPKIITSLYKASQVGVKIDLIVRGICCLRPGLKGISDNIKVVSIIGRYLEHSRVFYFYNKGKEE VYIGSADWMPRNLDRRIEAIIPVEDSEITKELQEIMGILLSDNRQAWDLQPDGKYIQRRSTENFPELACHKILMETVANT >Mature_719_residues SKNKKNTVETPIEKKLSNPQYYFNRELSWLEFNRRVLSEGLDPRTPLLERLKFLGIFSSNLDEYFMVRVAVLKKQIEAEV HKLTPDGRTPQEQLDEINQILLPMVSLQHQFFEQNLRPELRKNGIDILNYIDLDREEKTYLRNYFEEHIFPVLTPLAIDA SHPFPYLSNLSFNLAVMLKNPDTQEDLLARIKVPKILPRFLCLPEKLQIEQKAKTLNWTGVPLEQVIAHNLGALFPGMDI QEYHVFRITRDADLAVQEDEGDDLLLVIEKELRKQRIGGTVVRMEINPTMPSKLKKTLMDNLELSEKDVYTVDGLLDLKD LMSFLGLPLPHLKDPTWTSTMPPRLRHYGDELRIPDLNENNKIDFFEVIRQKDLLLHHPYHSFASTVQGFISQAAHDPNV LAIKMTLYRTSGNSPIVNALIAAAENDKQVAVLVELKARFDEENNIQWARKLEQYGVHVVYGLAGLKTHTKIVMVVRQEE GHIRRYVHIGTGNYNPKTAKIYTDLGLLSCRPELGADLADLFNFLTGYSRQQSYRKLLVAPVNMRDRFMKLIRREIENCQ NGDTGRIVAQMNSLVDPKIITSLYKASQVGVKIDLIVRGICCLRPGLKGISDNIKVVSIIGRYLEHSRVFYFYNKGKEEV YIGSADWMPRNLDRRIEAIIPVEDSEITKELQEIMGILLSDNRQAWDLQPDGKYIQRRSTENFPELACHKILMETVANT
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=685, Percent_Identity=35.7664233576642, Blast_Score=412, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 82997; Mature: 82866
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: PS00018 EF_HAND_1 ; PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNKKNTVETPIEKKLSNPQYYFNRELSWLEFNRRVLSEGLDPRTPLLERLKFLGIFSS CCCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC NLDEYFMVRVAVLKKQIEAEVHKLTPDGRTPQEQLDEINQILLPMVSLQHQFFEQNLRPE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LRKNGIDILNYIDLDREEKTYLRNYFEEHIFPVLTPLAIDASHPFPYLSNLSFNLAVMLK HHHCCCCEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCEEEEEEEC NPDTQEDLLARIKVPKILPRFLCLPEKLQIEQKAKTLNWTGVPLEQVIAHNLGALFPGMD CCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC IQEYHVFRITRDADLAVQEDEGDDLLLVIEKELRKQRIGGTVVRMEINPTMPSKLKKTLM CCCEEEEEEECCCCCEEECCCCCCEEEEEHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH DNLELSEKDVYTVDGLLDLKDLMSFLGLPLPHLKDPTWTSTMPPRLRHYGDELRIPDLNE HCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC NNKIDFFEVIRQKDLLLHHPYHSFASTVQGFISQAAHDPNVLAIKMTLYRTSGNSPIVNA CCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHH LIAAAENDKQVAVLVELKARFDEENNIQWARKLEQYGVHVVYGLAGLKTHTKIVMVVRQE HHHHCCCCCEEEEEEEEHHHCCCCCCHHHHHHHHHCCCEEEEEHHCCCCCCEEEEEEECC EGHIRRYVHIGTGNYNPKTAKIYTDLGLLSCRPELGADLADLFNFLTGYSRQQSYRKLLV CCCEEEEEEEECCCCCCCEEEEEECCCCEECCHHCCCCHHHHHHHHHCCHHHHHHHHHEE APVNMRDRFMKLIRREIENCQNGDTGRIVAQMNSLVDPKIITSLYKASQVGVKIDLIVRG CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCEEEHHHHHH ICCLRPGLKGISDNIKVVSIIGRYLEHSRVFYFYNKGKEEVYIGSADWMPRNLDRRIEAI HHHHCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCCEEEEECCCCCCCCHHCCEEEE IPVEDSEITKELQEIMGILLSDNRQAWDLQPDGKYIQRRSTENFPELACHKILMETVANT ECCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SKNKKNTVETPIEKKLSNPQYYFNRELSWLEFNRRVLSEGLDPRTPLLERLKFLGIFSS CCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC NLDEYFMVRVAVLKKQIEAEVHKLTPDGRTPQEQLDEINQILLPMVSLQHQFFEQNLRPE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LRKNGIDILNYIDLDREEKTYLRNYFEEHIFPVLTPLAIDASHPFPYLSNLSFNLAVMLK HHHCCCCEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCEEEEEEEC NPDTQEDLLARIKVPKILPRFLCLPEKLQIEQKAKTLNWTGVPLEQVIAHNLGALFPGMD CCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC IQEYHVFRITRDADLAVQEDEGDDLLLVIEKELRKQRIGGTVVRMEINPTMPSKLKKTLM CCCEEEEEEECCCCCEEECCCCCCEEEEEHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH DNLELSEKDVYTVDGLLDLKDLMSFLGLPLPHLKDPTWTSTMPPRLRHYGDELRIPDLNE HCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC NNKIDFFEVIRQKDLLLHHPYHSFASTVQGFISQAAHDPNVLAIKMTLYRTSGNSPIVNA CCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCHHHHH LIAAAENDKQVAVLVELKARFDEENNIQWARKLEQYGVHVVYGLAGLKTHTKIVMVVRQE HHHHCCCCCEEEEEEEEHHHCCCCCCHHHHHHHHHCCCEEEEEHHCCCCCCEEEEEEECC EGHIRRYVHIGTGNYNPKTAKIYTDLGLLSCRPELGADLADLFNFLTGYSRQQSYRKLLV CCCEEEEEEEECCCCCCCEEEEEECCCCEECCHHCCCCHHHHHHHHHCCHHHHHHHHHEE APVNMRDRFMKLIRREIENCQNGDTGRIVAQMNSLVDPKIITSLYKASQVGVKIDLIVRG CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCEEEHHHHHH ICCLRPGLKGISDNIKVVSIIGRYLEHSRVFYFYNKGKEEVYIGSADWMPRNLDRRIEAI HHHHCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCCEEEEECCCCCCCCHHCCEEEE IPVEDSEITKELQEIMGILLSDNRQAWDLQPDGKYIQRRSTENFPELACHKILMETVANT ECCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]