| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113474735
Identifier: 113474735
GI number: 113474735
Start: 1460342
End: 1460470
Strand: Reverse
Name: 113474735
Synonym: Tery_0927
Alternate gene names: NA
Gene position: 1460470-1460342 (Counterclockwise)
Preceding gene: 113474736
Following gene: 113474733
Centisome position: 18.84
GC content: 27.91
Gene sequence:
>129_bases GTGTGTATGGAAAAATATTTGGAGTTATTTGCCGAAAAATATCCTGATGATTTACATATTATTCAATTAGACAATGGAGC TCTAAATCAAAGTTTAAATATGCCAATTCCTGAGAACATAATTTTTTGA
Upstream 100 bases:
>100_bases GGCTGTTTAAGCATTTGTCGCTTTATGGGAGTAATATAACCATTCAATAGAAGCATTAACAGGAGAGAGTTTTTTCTATT AATTTAGCCATTTAGACACA
Downstream 100 bases:
>100_bases TTTTAACCTCCTTATTCTCCAGAATTAAACCCTATCGAAAGATTATGGTTAGAAATAAACATAAAATTAACATGGGAAAT ATTTGATAATTTAGAGCAGC
Product: transposase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 42
Protein sequence:
>42_residues MCMEKYLELFAEKYPDDLHIIQLDNGALNQSLNMPIPENIIF
Sequences:
>Translated_42_residues MCMEKYLELFAEKYPDDLHIIQLDNGALNQSLNMPIPENIIF >Mature_42_residues MCMEKYLELFAEKYPDDLHIIQLDNGALNQSLNMPIPENIIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4926; Mature: 4926
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCMEKYLELFAEKYPDDLHIIQLDNGALNQSLNMPIPENIIF CCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MCMEKYLELFAEKYPDDLHIIQLDNGALNQSLNMPIPENIIF CCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA