Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474733

Identifier: 113474733

GI number: 113474733

Start: 1457516

End: 1457776

Strand: Reverse

Name: 113474733

Synonym: Tery_0923

Alternate gene names: NA

Gene position: 1457776-1457516 (Counterclockwise)

Preceding gene: 113474735

Following gene: 113474731

Centisome position: 18.81

GC content: 37.55

Gene sequence:

>261_bases
TTGCTAAGACATTACTTAGACTTTGATTTGGACTTGGACTTGGACTTACTCATACTTACTTTTATGCCATGTACTATTAT
TTTTACACTATGGGCATCCGCAGTGCAACAAAGCCAACCTTATCAATTTAATTTGATACTTGATGACAAAAGAAATCAAG
TGGCGAGTAATGCTATGGCCTGTCACGATGGCAGAGTATCTACACTTATGTTTAGGCCAGCTACTTGGATGGTAAATAGC
AGAGACTCAAAGAGTAATTGA

Upstream 100 bases:

>100_bases
CCACTCTTGTGTTGATTGACCCATTGCTTTATTACCTCATAGGGTTAGCCCAAATGTCAAACTAACTCTTTGTTTTAAGG
AAATATTATACTTAGAACAG

Downstream 100 bases:

>100_bases
GAGTAAGAGTGGGTCTCAAAGCCAGACCTAATGTCCAACTTAGTGCAGGGAGTGTCTGATAGCCAATCAGTGAAAACTTA
TAGTAGAGGAGAAGACATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MLRHYLDFDLDLDLDLLILTFMPCTIIFTLWASAVQQSQPYQFNLILDDKRNQVASNAMACHDGRVSTLMFRPATWMVNS
RDSKSN

Sequences:

>Translated_86_residues
MLRHYLDFDLDLDLDLLILTFMPCTIIFTLWASAVQQSQPYQFNLILDDKRNQVASNAMACHDGRVSTLMFRPATWMVNS
RDSKSN
>Mature_86_residues
MLRHYLDFDLDLDLDLLILTFMPCTIIFTLWASAVQQSQPYQFNLILDDKRNQVASNAMACHDGRVSTLMFRPATWMVNS
RDSKSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9971; Mature: 9971

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRHYLDFDLDLDLDLLILTFMPCTIIFTLWASAVQQSQPYQFNLILDDKRNQVASNAMA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHCCEE
CHDGRVSTLMFRPATWMVNSRDSKSN
CCCCCEEEEEECCCEEEEECCCCCCC
>Mature Secondary Structure
MLRHYLDFDLDLDLDLLILTFMPCTIIFTLWASAVQQSQPYQFNLILDDKRNQVASNAMA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHCCEE
CHDGRVSTLMFRPATWMVNSRDSKSN
CCCCCEEEEEECCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA