Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is cysZ [H]

Identifier: 113474703

GI number: 113474703

Start: 1410906

End: 1411763

Strand: Direct

Name: cysZ [H]

Synonym: Tery_0890

Alternate gene names: 113474703

Gene position: 1410906-1411763 (Clockwise)

Preceding gene: 113474702

Following gene: 113474704

Centisome position: 18.2

GC content: 30.89

Gene sequence:

>858_bases
ATGATAAAACAAGGTAGTTTCAAATCAATACTATCTATCTTTAAAGCTCCTGCCGGATTAATAGCTGGTTCAACCTATCA
TTTTCGTGCTTTAATAATATTTGTAAAAAATCCTAGATTAATCAATTACATAATTGCTCCGATTTTTATTAATATTGTTG
TCGGTATTTTTCTGTATATTAGTCTGCTATTACCTGGAATAAGTTTAATTAATACTATCTTTAATAATTTATCTTTGCAG
TTTGATAGCCTGATTTATCAATTACCAACTTGGTTAAAATTCTTGAGTTATTTGGATAATGCTTTAGGTTTGCTCTTTAA
GCTCATTCTATTTACAATATTTTTGCTAATTATTGGATTTTTGTTAGTACAATTTGGAGTTATTCTTGGTTCTCCTTTTT
ATGGTCAACTTTCTGAACAATTAGAAAAAACTCGAACTGGTACATTACCTGAAGCTTCTTCTGGTTTACTATCTATTATT
AGGGATATTTACCGAGCTATACTTTTTGAGCTCAAAAAAGTGGCATTATTATTAGCAATAGGCTTGCCGATGTTGTTGCT
CAATTTTTTTCCTGGAGGCTCTTTAATAGCAACTATTGGCGGCATCGCTTTAACAACTTCTATTGTTTGTCTTGACTTTT
TTGATGGACCTTTGGAGAGAAGAAAATTAAAATTTCGAGAGAAGTTAAAAGTTGTATATCGTAGCTTACCAGCAAGTGCC
ACTTTTGGGTTAATTTGTCAAGTTTTAATTACTATTCCTATAGTTAATTTTTTGGCTATTCCTATATGTGTAGTGGCAGG
GACTTTATTTTGTTGCGATCGCGTACTACCAAAGTTATTACCAAATAACCAAACTTAA

Upstream 100 bases:

>100_bases
TTTGTGAGTCTAATAAACTACATAGCCAGGCTTAATAATTAATAGTGTTAGGGTGTAACTTGAAAATTAAACTAAGTCAA
AAAAACCTAATTTAAAATCA

Downstream 100 bases:

>100_bases
AGAGGGTTTTTAGGTACTATACATTAAATATTAGGGCTTTGATGGCTGATTACAGTAGCAGCCTTTAGGAGAGAGCATGG
GTAAGAAAAATGTCAACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MIKQGSFKSILSIFKAPAGLIAGSTYHFRALIIFVKNPRLINYIIAPIFINIVVGIFLYISLLLPGISLINTIFNNLSLQ
FDSLIYQLPTWLKFLSYLDNALGLLFKLILFTIFLLIIGFLLVQFGVILGSPFYGQLSEQLEKTRTGTLPEASSGLLSII
RDIYRAILFELKKVALLLAIGLPMLLLNFFPGGSLIATIGGIALTTSIVCLDFFDGPLERRKLKFREKLKVVYRSLPASA
TFGLICQVLITIPIVNFLAIPICVVAGTLFCCDRVLPKLLPNNQT

Sequences:

>Translated_285_residues
MIKQGSFKSILSIFKAPAGLIAGSTYHFRALIIFVKNPRLINYIIAPIFINIVVGIFLYISLLLPGISLINTIFNNLSLQ
FDSLIYQLPTWLKFLSYLDNALGLLFKLILFTIFLLIIGFLLVQFGVILGSPFYGQLSEQLEKTRTGTLPEASSGLLSII
RDIYRAILFELKKVALLLAIGLPMLLLNFFPGGSLIATIGGIALTTSIVCLDFFDGPLERRKLKFREKLKVVYRSLPASA
TFGLICQVLITIPIVNFLAIPICVVAGTLFCCDRVLPKLLPNNQT
>Mature_285_residues
MIKQGSFKSILSIFKAPAGLIAGSTYHFRALIIFVKNPRLINYIIAPIFINIVVGIFLYISLLLPGISLINTIFNNLSLQ
FDSLIYQLPTWLKFLSYLDNALGLLFKLILFTIFLLIIGFLLVQFGVILGSPFYGQLSEQLEKTRTGTLPEASSGLLSII
RDIYRAILFELKKVALLLAIGLPMLLLNFFPGGSLIATIGGIALTTSIVCLDFFDGPLERRKLKFREKLKVVYRSLPASA
TFGLICQVLITIPIVNFLAIPICVVAGTLFCCDRVLPKLLPNNQT

Specific function: Possibly involved in sulfate transport [H]

COG id: COG2981

COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CysZ family [H]

Homologues:

Organism=Escherichia coli, GI1788753, Length=251, Percent_Identity=25.8964143426295, Blast_Score=94, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022985
- InterPro:   IPR007496 [H]

Pfam domain/function: PF04401 DUF540 [H]

EC number: NA

Molecular weight: Translated: 31576; Mature: 31576

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQGSFKSILSIFKAPAGLIAGSTYHFRALIIFVKNPRLINYIIAPIFINIVVGIFLYI
CCCCCHHHHHHHHHHCCHHHHCCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
SLLLPGISLINTIFNNLSLQFDSLIYQLPTWLKFLSYLDNALGLLFKLILFTIFLLIIGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVQFGVILGSPFYGQLSEQLEKTRTGTLPEASSGLLSIIRDIYRAILFELKKVALLLAI
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLPMLLLNFFPGGSLIATIGGIALTTSIVCLDFFDGPLERRKLKFREKLKVVYRSLPASA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH
TFGLICQVLITIPIVNFLAIPICVVAGTLFCCDRVLPKLLPNNQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIKQGSFKSILSIFKAPAGLIAGSTYHFRALIIFVKNPRLINYIIAPIFINIVVGIFLYI
CCCCCHHHHHHHHHHCCHHHHCCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
SLLLPGISLINTIFNNLSLQFDSLIYQLPTWLKFLSYLDNALGLLFKLILFTIFLLIIGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVQFGVILGSPFYGQLSEQLEKTRTGTLPEASSGLLSIIRDIYRAILFELKKVALLLAI
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLPMLLLNFFPGGSLIATIGGIALTTSIVCLDFFDGPLERRKLKFREKLKVVYRSLPASA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH
TFGLICQVLITIPIVNFLAIPICVVAGTLFCCDRVLPKLLPNNQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA