| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is ilvE [H]
Identifier: 113474702
GI number: 113474702
Start: 1409261
End: 1410328
Strand: Direct
Name: ilvE [H]
Synonym: Tery_0889
Alternate gene names: 113474702
Gene position: 1409261-1410328 (Clockwise)
Preceding gene: 113474701
Following gene: 113474703
Centisome position: 18.18
GC content: 32.49
Gene sequence:
>1068_bases ATGCAAATAGTTAATTCTCAAATATCTATAGAAAAAACTAGCCACTCTCGGATTAAAGAACAGGATATTAATAATACTCC CTTTGGTAAAGTATTTAGCGATCATATGTTGGTTGCTACCTATGCAAATAATAGTTGGCAAGAGGTAAAAATTACTCCCT ATGGTAATATTTCTATTCGTCCTTCTCTCTCTGTACTTCATTATGGTCAGGCAGTTTTTGAAGGTTTAAAAGCTTATAAA AATTATCAGGGAAAACCTGTATTATTTCGGTTAGAAGCTAATTATAAAAGAATAAATAATTCAGCTTTTAGATTATGTAT GCCATCCATTCCTAAAGAAATTTTTATAGATGGTTTAAAGGAATTAATTAGACTAGATACTGATTGGATTCCTACTAAAT CAGATAGCGCATTATATATTCGACCTATTTATTTCGCTACAGATGAATCTGTCGGTCTCAAGCCTGCAAATAGTTATAAG TTTATTATTTTGTCTTCCCCTACAGGTACATTTTATTCGGCACCAGTTAAGTTAATTGTTACAGATAAATATGTCCGAGC TTCTGAAGGTGGAACTGGTGCAGCTAAATGTGCTGGGAATTATGCTGGTAGTTTTTTAGCAGATAAAGAAGCTAAAGAAC AAGGTTATGATAATGTTTTATGGTTGGATGGAAAGGAAAAAAAATATATTGAAGAATGTGGTACGATGAATGTTGCTTTT GTAATTAATGATGTTTTGATTACTCCTAAGTTGACAGGAAGTATATTAGGGGGAATTACTCGAGATAGTGCATTAACTTT ATTTAGAGATATGGGTGTTAAAGTTGAGGAAAGATTAATCTCTATTGATGAGGTTGCAAAGGCTTATGAAGCAGGAAATA TTTCTGAGGCTTTTGGTATGGGTACTGCTGCTACAATTGCTCATATTTCTGTTATTAACTATCAAGGTAAAGATATGATT TTACCTCCTGTTGATGAACGAAAATATGCTTCTCAAGTTTTGCAAAAATTAGAAGATATTAAAACTGGTAAAGTCACTGA CCCCTATGGTTGGATTTGTCAACTTTAA
Upstream 100 bases:
>100_bases TTTTTTTTTAATATCACTAGATAAATTTGATTAGATGTATTTAACAGGGCATGATATTATAAAATATATAAAGTAGTTTT TTACGAAAAGCCAGATAACA
Downstream 100 bases:
>100_bases ATACTTGAATATTATATTAGTCTTGGGATGATATAGCTGAATTTAGAATTCATAATTTAGAAGCTATAAGCCAAAATTAA AGAACATAAATTACTCAATA
Product: branched chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MQIVNSQISIEKTSHSRIKEQDINNTPFGKVFSDHMLVATYANNSWQEVKITPYGNISIRPSLSVLHYGQAVFEGLKAYK NYQGKPVLFRLEANYKRINNSAFRLCMPSIPKEIFIDGLKELIRLDTDWIPTKSDSALYIRPIYFATDESVGLKPANSYK FIILSSPTGTFYSAPVKLIVTDKYVRASEGGTGAAKCAGNYAGSFLADKEAKEQGYDNVLWLDGKEKKYIEECGTMNVAF VINDVLITPKLTGSILGGITRDSALTLFRDMGVKVEERLISIDEVAKAYEAGNISEAFGMGTAATIAHISVINYQGKDMI LPPVDERKYASQVLQKLEDIKTGKVTDPYGWICQL
Sequences:
>Translated_355_residues MQIVNSQISIEKTSHSRIKEQDINNTPFGKVFSDHMLVATYANNSWQEVKITPYGNISIRPSLSVLHYGQAVFEGLKAYK NYQGKPVLFRLEANYKRINNSAFRLCMPSIPKEIFIDGLKELIRLDTDWIPTKSDSALYIRPIYFATDESVGLKPANSYK FIILSSPTGTFYSAPVKLIVTDKYVRASEGGTGAAKCAGNYAGSFLADKEAKEQGYDNVLWLDGKEKKYIEECGTMNVAF VINDVLITPKLTGSILGGITRDSALTLFRDMGVKVEERLISIDEVAKAYEAGNISEAFGMGTAATIAHISVINYQGKDMI LPPVDERKYASQVLQKLEDIKTGKVTDPYGWICQL >Mature_355_residues MQIVNSQISIEKTSHSRIKEQDINNTPFGKVFSDHMLVATYANNSWQEVKITPYGNISIRPSLSVLHYGQAVFEGLKAYK NYQGKPVLFRLEANYKRINNSAFRLCMPSIPKEIFIDGLKELIRLDTDWIPTKSDSALYIRPIYFATDESVGLKPANSYK FIILSSPTGTFYSAPVKLIVTDKYVRASEGGTGAAKCAGNYAGSFLADKEAKEQGYDNVLWLDGKEKKYIEECGTMNVAF VINDVLITPKLTGSILGGITRDSALTLFRDMGVKVEERLISIDEVAKAYEAGNISEAFGMGTAATIAHISVINYQGKDMI LPPVDERKYASQVLQKLEDIKTGKVTDPYGWICQL
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=345, Percent_Identity=38.8405797101449, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI38176287, Length=345, Percent_Identity=38.8405797101449, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI296010906, Length=345, Percent_Identity=38.8405797101449, Blast_Score=234, Evalue=6e-62, Organism=Homo sapiens, GI50658084, Length=350, Percent_Identity=33.1428571428571, Blast_Score=211, Evalue=6e-55, Organism=Homo sapiens, GI296010902, Length=345, Percent_Identity=35.0724637681159, Blast_Score=195, Evalue=4e-50, Organism=Homo sapiens, GI296010900, Length=345, Percent_Identity=35.0724637681159, Blast_Score=195, Evalue=6e-50, Organism=Homo sapiens, GI258614015, Length=284, Percent_Identity=33.8028169014084, Blast_Score=168, Evalue=9e-42, Organism=Escherichia coli, GI48994963, Length=324, Percent_Identity=31.1728395061728, Blast_Score=125, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17568601, Length=366, Percent_Identity=34.9726775956284, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI17565728, Length=357, Percent_Identity=33.0532212885154, Blast_Score=177, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6322002, Length=335, Percent_Identity=39.1044776119403, Blast_Score=216, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6322608, Length=357, Percent_Identity=35.5742296918768, Blast_Score=202, Evalue=7e-53, Organism=Drosophila melanogaster, GI24641779, Length=364, Percent_Identity=35.4395604395604, Blast_Score=228, Evalue=4e-60,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 39448; Mature: 39448
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIVNSQISIEKTSHSRIKEQDINNTPFGKVFSDHMLVATYANNSWQEVKITPYGNISIR CCEECCEEEEEECHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCCEEEEEEECCCCEEEC PSLSVLHYGQAVFEGLKAYKNYQGKPVLFRLEANYKRINNSAFRLCMPSIPKEIFIDGLK CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCCCEEEEECCCCCHHHHHHHHH ELIRLDTDWIPTKSDSALYIRPIYFATDESVGLKPANSYKFIILSSPTGTFYSAPVKLIV HHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEECCEEEEE TDKYVRASEGGTGAAKCAGNYAGSFLADKEAKEQGYDNVLWLDGKEKKYIEECGTMNVAF EECEEEECCCCCCHHHHCCCCCCCHHCCCHHHHCCCCCEEEECCCCHHHHHHCCCCEEEE VINDVLITPKLTGSILGGITRDSALTLFRDMGVKVEERLISIDEVAKAYEAGNISEAFGM EEEEEEECCCHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCC GTAATIAHISVINYQGKDMILPPVDERKYASQVLQKLEDIKTGKVTDPYGWICQL CCHHHEEEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEC >Mature Secondary Structure MQIVNSQISIEKTSHSRIKEQDINNTPFGKVFSDHMLVATYANNSWQEVKITPYGNISIR CCEECCEEEEEECHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCCEEEEEEECCCCEEEC PSLSVLHYGQAVFEGLKAYKNYQGKPVLFRLEANYKRINNSAFRLCMPSIPKEIFIDGLK CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCCCEEEEECCCCCHHHHHHHHH ELIRLDTDWIPTKSDSALYIRPIYFATDESVGLKPANSYKFIILSSPTGTFYSAPVKLIV HHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEECCEEEEE TDKYVRASEGGTGAAKCAGNYAGSFLADKEAKEQGYDNVLWLDGKEKKYIEECGTMNVAF EECEEEECCCCCCHHHHCCCCCCCHHCCCHHHHCCCCCEEEECCCCHHHHHHCCCCEEEE VINDVLITPKLTGSILGGITRDSALTLFRDMGVKVEERLISIDEVAKAYEAGNISEAFGM EEEEEEECCCHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCC GTAATIAHISVINYQGKDMILPPVDERKYASQVLQKLEDIKTGKVTDPYGWICQL CCHHHEEEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA