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The map label for this gene is sodN [H]

Identifier: 113474704

GI number: 113474704

Start: 1412227

End: 1412706

Strand: Direct

Name: sodN [H]

Synonym: Tery_0891

Alternate gene names: 113474704

Gene position: 1412227-1412706 (Clockwise)

Preceding gene: 113474703

Following gene: 113474705

Centisome position: 18.22

GC content: 41.04

Gene sequence:

>480_bases
ATGGGGATATCTTTGAAAATTATGCTTAACACAATTGCAACTCAGATTAGAAAGTGGTTCTCAGCACCAGAGGTGAGTGC
TCACTGTGATGGTCCTTGCGGTGTTTATGACCCTGCTTCTGCTCGCATTTACGCTGAAGCTGTATTATCTATGACTAAGA
AAATTCTAGATCTTGACCCAAAAGCTGGAGATCATAAGACTGCTAATACCCTTTCTCGCTATATTGCAATTAAGGAAGAG
CAAGCTCAGAAGACTAAGGAAGATTTGCTTATTCTCTGGACTGATTATTTTAAGCCTGTACATTTAGAAAAGTATCCAGA
CCTCCACGATACTTTTTGGAAGGCTGCTAAGTTATGCTCTGCTTGTAAGGTAGAAGTTAGTTTGGAGCATGCTACTGAGT
TACTAGCTGCTGTGGAGAAAATTCACAATATGTTCTGGGCTACTAAGGAGCGGGATGTGACTTGGTACAAGGCTAGCTAA

Upstream 100 bases:

>100_bases
CGTCAACCCACTGAAGAGCTTAGGCTCAGTATGTATCTCCGCGCCTTTATGTCGCTGAGGATCTCAAAATTTTAACAACA
ATGTAATTTTTTCTATATAA

Downstream 100 bases:

>100_bases
TTTTTTTTGTTTGAGGTGGTAGGTACAAGGTTGATACAAACAATTGATAATAAAGAATTATTGCTTTGGTTATTAAGGTT
GCGCCAACGGTTTTGTGTCA

Product: putative nickel-containing superoxide dismutase

Products: NA

Alternate protein names: NiSOD; Nickel-containing superoxide dismutase [H]

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MGISLKIMLNTIATQIRKWFSAPEVSAHCDGPCGVYDPASARIYAEAVLSMTKKILDLDPKAGDHKTANTLSRYIAIKEE
QAQKTKEDLLILWTDYFKPVHLEKYPDLHDTFWKAAKLCSACKVEVSLEHATELLAAVEKIHNMFWATKERDVTWYKAS

Sequences:

>Translated_159_residues
MGISLKIMLNTIATQIRKWFSAPEVSAHCDGPCGVYDPASARIYAEAVLSMTKKILDLDPKAGDHKTANTLSRYIAIKEE
QAQKTKEDLLILWTDYFKPVHLEKYPDLHDTFWKAAKLCSACKVEVSLEHATELLAAVEKIHNMFWATKERDVTWYKAS
>Mature_158_residues
GISLKIMLNTIATQIRKWFSAPEVSAHCDGPCGVYDPASARIYAEAVLSMTKKILDLDPKAGDHKTANTLSRYIAIKEEQ
AQKTKEDLLILWTDYFKPVHLEKYPDLHDTFWKAAKLCSACKVEVSLEHATELLAAVEKIHNMFWATKERDVTWYKAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nickel superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014123 [H]

Pfam domain/function: PF09055 Sod_Ni [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 18058; Mature: 17927

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGISLKIMLNTIATQIRKWFSAPEVSAHCDGPCGVYDPASARIYAEAVLSMTKKILDLDP
CCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
KAGDHKTANTLSRYIAIKEEQAQKTKEDLLILWTDYFKPVHLEKYPDLHDTFWKAAKLCS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
ACKVEVSLEHATELLAAVEKIHNMFWATKERDVTWYKAS
HHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure 
GISLKIMLNTIATQIRKWFSAPEVSAHCDGPCGVYDPASARIYAEAVLSMTKKILDLDP
CEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
KAGDHKTANTLSRYIAIKEEQAQKTKEDLLILWTDYFKPVHLEKYPDLHDTFWKAAKLCS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
ACKVEVSLEHATELLAAVEKIHNMFWATKERDVTWYKAS
HHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8836134 [H]