| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is mhpC [C]
Identifier: 113474614
GI number: 113474614
Start: 1247396
End: 1248022
Strand: Direct
Name: mhpC [C]
Synonym: Tery_0781
Alternate gene names: 113474614
Gene position: 1247396-1248022 (Clockwise)
Preceding gene: 113474613
Following gene: 113474615
Centisome position: 16.1
GC content: 33.49
Gene sequence:
>627_bases ATGTCTAAATCAATCATGGATACCAATATTAATTATAAATGTCTGGAGTTGGAAAATGCTCGGATCCATTACCTAGAAAC TGGAAAAAAAAATGCAGTTAGTGTATTGTTGCTACATGGAGCAAGTTTTACTGCTCATACATGGCAAGAAATAGGTACTC TTGATATTTTGACTACCCAGGGTTACCGAGCTGTTGCAGTAGATATTCCTGGCTATGGTCGTTCCCAAAGAATATCAGTT TCTAACTTAGGTTTTTTGCGAGGAATATTAAATAAGTTAAACTTAAATTTACCAATTTTAGTATCCCCTTCTATGAGCGG TGGTTATAGTTTCCCTTTTGTGATTGATGATTTTGATAAACTAGGGGGCTTTGTAGCAGTTTCCACTGTAGGAATTGAGC GTTTTCAGGATGAATTAAAAGGAATTAAATTACCAACATTAGCTATTTGGGGAAGTAATGATCGGATAGTACCTATAGAA AAAGCTGATTTATTAGTAGAATTAATGCCCAATGCTCAAAAAGTTATTCTGACTGACGCTGGTCATGCTTGTTATATACA AAAAACTGAAGAGTTTCACAAACATTTAATTAAATTTATTAAGAGCATTGACTTCATTAAAGAATAA
Upstream 100 bases:
>100_bases GCTAATTTATAGAAAACTATTTTATTTTTATGTAAAATTTATGTTGGCAATATTCATGTTTAATAATCAGTTTTTATTGT ACTATTTAAAATTATAAAAT
Downstream 100 bases:
>100_bases TATGAAGTGGACTGACACAGGGCATACTAGAAACTAAATTTCTATATGTAATTTCTAGTAATTTATAGCACCCTAAGTAA AGATATGGACATTTATAGGA
Product: abhydrolase
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Abhydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Fold Family Hydrolase; Carboxylesterase; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Hydrolase Or Acyltransferase; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSKSIMDTNINYKCLELENARIHYLETGKKNAVSVLLLHGASFTAHTWQEIGTLDILTTQGYRAVAVDIPGYGRSQRISV SNLGFLRGILNKLNLNLPILVSPSMSGGYSFPFVIDDFDKLGGFVAVSTVGIERFQDELKGIKLPTLAIWGSNDRIVPIE KADLLVELMPNAQKVILTDAGHACYIQKTEEFHKHLIKFIKSIDFIKE
Sequences:
>Translated_208_residues MSKSIMDTNINYKCLELENARIHYLETGKKNAVSVLLLHGASFTAHTWQEIGTLDILTTQGYRAVAVDIPGYGRSQRISV SNLGFLRGILNKLNLNLPILVSPSMSGGYSFPFVIDDFDKLGGFVAVSTVGIERFQDELKGIKLPTLAIWGSNDRIVPIE KADLLVELMPNAQKVILTDAGHACYIQKTEEFHKHLIKFIKSIDFIKE >Mature_207_residues SKSIMDTNINYKCLELENARIHYLETGKKNAVSVLLLHGASFTAHTWQEIGTLDILTTQGYRAVAVDIPGYGRSQRISVS NLGFLRGILNKLNLNLPILVSPSMSGGYSFPFVIDDFDKLGGFVAVSTVGIERFQDELKGIKLPTLAIWGSNDRIVPIEK ADLLVELMPNAQKVILTDAGHACYIQKTEEFHKHLIKFIKSIDFIKE
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI226437571, Length=194, Percent_Identity=37.1134020618557, Blast_Score=134, Evalue=6e-32, Organism=Homo sapiens, GI226443152, Length=180, Percent_Identity=36.1111111111111, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI14249382, Length=180, Percent_Identity=36.1111111111111, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17543658, Length=175, Percent_Identity=29.1428571428571, Blast_Score=81, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.- [C]
Molecular weight: Translated: 23165; Mature: 23034
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSIMDTNINYKCLELENARIHYLETGKKNAVSVLLLHGASFTAHTWQEIGTLDILTTQ CCCCEEECCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHCCEEEEEECC GYRAVAVDIPGYGRSQRISVSNLGFLRGILNKLNLNLPILVSPSMSGGYSFPFVIDDFDK CCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEECCCCCCCEECCEEEECHHH LGGFVAVSTVGIERFQDELKGIKLPTLAIWGSNDRIVPIEKADLLVELMPNAQKVILTDA CCCEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHEEEEECCCCEEEEEEEC GHACYIQKTEEFHKHLIKFIKSIDFIKE CCEEEEECHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKSIMDTNINYKCLELENARIHYLETGKKNAVSVLLLHGASFTAHTWQEIGTLDILTTQ CCCEEECCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHCCEEEEEECC GYRAVAVDIPGYGRSQRISVSNLGFLRGILNKLNLNLPILVSPSMSGGYSFPFVIDDFDK CCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEECCCCCCCEECCEEEECHHH LGGFVAVSTVGIERFQDELKGIKLPTLAIWGSNDRIVPIEKADLLVELMPNAQKVILTDA CCCEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHEEEEECCCCEEEEEEEC GHACYIQKTEEFHKHLIKFIKSIDFIKE CCEEEEECHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA