Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474615

Identifier: 113474615

GI number: 113474615

Start: 1249747

End: 1251102

Strand: Direct

Name: 113474615

Synonym: Tery_0783

Alternate gene names: NA

Gene position: 1249747-1251102 (Clockwise)

Preceding gene: 113474614

Following gene: 113474616

Centisome position: 16.13

GC content: 35.32

Gene sequence:

>1356_bases
ATGGCTACCAACAGTAACGATAGTATCAATGAAGTAATTCAATTAGGTACTCTGTTTCCTCAAACACCTATAACTCGTTC
AGGGACAATAAATGATTTAGATAAACTAGACTTATATGGGCTTACAGTTGATGCACCCTTAAATTCAGGAATTGCACTAC
AAAATCTTACTGGCAATATTGATCTAGAAGTATTAGATAGCAATGGTAATTTAATTGCTAGGGGTAATAATTTAGGGACG
TCTAATGAAGCATTTCAGGCAGTTTTTTCTACCCCCGGTCAATACTTTATCAATGTTTTTCAAACTTCTCCTGGTATTGC
TAGTGACTATGAGTTAGCTCTATTTCCTAGGGATGCTAATGTTTCCCTATTTACTGGAGATACTAATACTTATAGTATTA
ACAATAATAATGATGATCCAAGGACACCAGACTTTTTAGGTACTCTAGTTCCAGAAGAACAAATAAGTGATTCCGCAAGA
ATTAATAATCTAGATCGTATAGACAACTATAGCTTCATAGCTGAACAACCATTGATTGTAGGGGTTGCTTTTGAAAAAAG
CAATAGTAATATTGAAATAGCAGTATTAGATAGTAATCGTAATTTAATTGAGCGTAGTCAAAACTTTGATCAGTTAAGTG
AGAAGTTTCAAGTGTTTTTACCTAACCCCGATACTTATAATATCACTATTTTTCAGCCTGAGTCTGTTAGTGATGACTCT
TTCTCTGATTATGACTTAAGCCTTTTCCCTAGTGCTTTTGATATGAATTCTGACATTATACCTTCAGTACCTCCAGCAAC
TCCAATATCTCCAGAACCTCCAACAGATCCAGTAACTCCAACACCGCCAATATCCCCGGAACTTCAAGGAGTAAATGTCA
GTATTGACAGTATTATAGACCGAACTGATGAAACAGTGAGAAATCGTGAAAATACGGCTTTTGTTTTTAAAGAAGATTAT
TTGTTAAATGCTACACCAAATACTCCAATAACAATCGATCTGATCAGCAATAATAGTGACTTTGACCCTCTATTAGAAGT
ATATCAAATTCCTCAAGATTCTCTGTTAACACCTGAACGGAGACAGATACCAATTGCAGCTAACGATAATGGTGGTAACG
ATGTTAATAATGTTAATGCAAGAATTGGACCAGAAGTAGAAGCAGATATTCCAGAGATTTCTTCTCAGTTAACTCTATTA
CCAGAATTTAACTATTTAGTGCGCGTAACTTATACGTCTGATCTACCTTTGGATGGAAGTTTTGCCTTAAGTGGAAGTAT
TGATAATGGTTTTGTTAATTTCCAGAGGGTACTATCCGGAAATCCTATAGGAGAAATTATCGGAGGAGAGCCGTAA

Upstream 100 bases:

>100_bases
ATGATATTATACTTATGTCTTAACGTAAAAAGATTTTTACAAATCACTAAAGACTTAACCAATTTAACCAATCATCAACA
TAATTAAAAAATTTTGACAC

Downstream 100 bases:

>100_bases
ATCAATAATTTTGTTTTATTAATGAAGAAAACTTTTTCTTGATAAAGAAATCACAATAATCAGTTGATATACTCCCCGGC
TCTTAGGTGCGGGGATTTTT

Product: peptidase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MATNSNDSINEVIQLGTLFPQTPITRSGTINDLDKLDLYGLTVDAPLNSGIALQNLTGNIDLEVLDSNGNLIARGNNLGT
SNEAFQAVFSTPGQYFINVFQTSPGIASDYELALFPRDANVSLFTGDTNTYSINNNNDDPRTPDFLGTLVPEEQISDSAR
INNLDRIDNYSFIAEQPLIVGVAFEKSNSNIEIAVLDSNRNLIERSQNFDQLSEKFQVFLPNPDTYNITIFQPESVSDDS
FSDYDLSLFPSAFDMNSDIIPSVPPATPISPEPPTDPVTPTPPISPELQGVNVSIDSIIDRTDETVRNRENTAFVFKEDY
LLNATPNTPITIDLISNNSDFDPLLEVYQIPQDSLLTPERRQIPIAANDNGGNDVNNVNARIGPEVEADIPEISSQLTLL
PEFNYLVRVTYTSDLPLDGSFALSGSIDNGFVNFQRVLSGNPIGEIIGGEP

Sequences:

>Translated_451_residues
MATNSNDSINEVIQLGTLFPQTPITRSGTINDLDKLDLYGLTVDAPLNSGIALQNLTGNIDLEVLDSNGNLIARGNNLGT
SNEAFQAVFSTPGQYFINVFQTSPGIASDYELALFPRDANVSLFTGDTNTYSINNNNDDPRTPDFLGTLVPEEQISDSAR
INNLDRIDNYSFIAEQPLIVGVAFEKSNSNIEIAVLDSNRNLIERSQNFDQLSEKFQVFLPNPDTYNITIFQPESVSDDS
FSDYDLSLFPSAFDMNSDIIPSVPPATPISPEPPTDPVTPTPPISPELQGVNVSIDSIIDRTDETVRNRENTAFVFKEDY
LLNATPNTPITIDLISNNSDFDPLLEVYQIPQDSLLTPERRQIPIAANDNGGNDVNNVNARIGPEVEADIPEISSQLTLL
PEFNYLVRVTYTSDLPLDGSFALSGSIDNGFVNFQRVLSGNPIGEIIGGEP
>Mature_450_residues
ATNSNDSINEVIQLGTLFPQTPITRSGTINDLDKLDLYGLTVDAPLNSGIALQNLTGNIDLEVLDSNGNLIARGNNLGTS
NEAFQAVFSTPGQYFINVFQTSPGIASDYELALFPRDANVSLFTGDTNTYSINNNNDDPRTPDFLGTLVPEEQISDSARI
NNLDRIDNYSFIAEQPLIVGVAFEKSNSNIEIAVLDSNRNLIERSQNFDQLSEKFQVFLPNPDTYNITIFQPESVSDDSF
SDYDLSLFPSAFDMNSDIIPSVPPATPISPEPPTDPVTPTPPISPELQGVNVSIDSIIDRTDETVRNRENTAFVFKEDYL
LNATPNTPITIDLISNNSDFDPLLEVYQIPQDSLLTPERRQIPIAANDNGGNDVNNVNARIGPEVEADIPEISSQLTLLP
EFNYLVRVTYTSDLPLDGSFALSGSIDNGFVNFQRVLSGNPIGEIIGGEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49305; Mature: 49174

Theoretical pI: Translated: 3.64; Mature: 3.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNSNDSINEVIQLGTLFPQTPITRSGTINDLDKLDLYGLTVDAPLNSGIALQNLTGNI
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCE
DLEVLDSNGNLIARGNNLGTSNEAFQAVFSTPGQYFINVFQTSPGIASDYELALFPRDAN
EEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCC
VSLFTGDTNTYSINNNNDDPRTPDFLGTLVPEEQISDSARINNLDRIDNYSFIAEQPLIV
EEEEECCCEEEEECCCCCCCCCCHHHHCCCCHHHCCCCHHCCCCHHCCCCEEEECCCEEE
GVAFEKSNSNIEIAVLDSNRNLIERSQNFDQLSEKFQVFLPNPDTYNITIFQPESVSDDS
EEEEECCCCCEEEEEEECCCHHHHHCCCHHHHCCCEEEEECCCCEEEEEEECCCCCCCCC
FSDYDLSLFPSAFDMNSDIIPSVPPATPISPEPPTDPVTPTPPISPELQGVNVSIDSIID
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHH
RTDETVRNRENTAFVFKEDYLLNATPNTPITIDLISNNSDFDPLLEVYQIPQDSLLTPER
HHHHHHHCCCCEEEEEECCEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCHH
RQIPIAANDNGGNDVNNVNARIGPEVEADIPEISSQLTLLPEFNYLVRVTYTSDLPLDGS
HEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCC
FALSGSIDNGFVNFQRVLSGNPIGEIIGGEP
EEEECCCCCCHHHHHHHHCCCCCHHCCCCCC
>Mature Secondary Structure 
ATNSNDSINEVIQLGTLFPQTPITRSGTINDLDKLDLYGLTVDAPLNSGIALQNLTGNI
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCE
DLEVLDSNGNLIARGNNLGTSNEAFQAVFSTPGQYFINVFQTSPGIASDYELALFPRDAN
EEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCC
VSLFTGDTNTYSINNNNDDPRTPDFLGTLVPEEQISDSARINNLDRIDNYSFIAEQPLIV
EEEEECCCEEEEECCCCCCCCCCHHHHCCCCHHHCCCCHHCCCCHHCCCCEEEECCCEEE
GVAFEKSNSNIEIAVLDSNRNLIERSQNFDQLSEKFQVFLPNPDTYNITIFQPESVSDDS
EEEEECCCCCEEEEEEECCCHHHHHCCCHHHHCCCEEEEECCCCEEEEEEECCCCCCCCC
FSDYDLSLFPSAFDMNSDIIPSVPPATPISPEPPTDPVTPTPPISPELQGVNVSIDSIID
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHH
RTDETVRNRENTAFVFKEDYLLNATPNTPITIDLISNNSDFDPLLEVYQIPQDSLLTPER
HHHHHHHCCCCEEEEEECCEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCHH
RQIPIAANDNGGNDVNNVNARIGPEVEADIPEISSQLTLLPEFNYLVRVTYTSDLPLDGS
HEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCC
FALSGSIDNGFVNFQRVLSGNPIGEIIGGEP
EEEECCCCCCHHHHHHHHCCCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA