Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474613

Identifier: 113474613

GI number: 113474613

Start: 1241466

End: 1242032

Strand: Direct

Name: 113474613

Synonym: Tery_0777

Alternate gene names: NA

Gene position: 1241466-1242032 (Clockwise)

Preceding gene: 113474611

Following gene: 113474614

Centisome position: 16.02

GC content: 30.51

Gene sequence:

>567_bases
ATGAAAACTACTACTACTGCTCTTAAAGAATGGAATGTTACTGTTAACGCTTTGGAAAATGGCAGTACAATTATGTTACT
AAGAAAAGGTGGAATTAGAGAACAGAAAGGTAATTTTACTATTGCACATCAACAGGTTTTACTCTACCCTACTTTTGAAC
ATCAAAAGCCAGATTTACTCAAACCAAAATATGCCAGCCAAGTACAAATCGTAGATTCTGGTTGGCATCCTAAAAAAATT
AAAATTAGTAGTTTTGCTGAGATTACTAATGTTTTACCCGTAAGTGATAAGTCAATTTTAAATAAGTTATTTTTATCTCA
TATTTGGAATGAAAAATTTATCAGCAATCGCCTAAAATATAAACCACAAAAAATGCTTTATATTTTACTTTTGAGAACTT
ATAAACTTTCTCAAGCCTATGAATTTTTTTACCGCCCAGAATATGGAGGCTGTCGTTCTTGGATTAACTTAGCTACACCA
ATCAATATCACAAACTTAACTCCTGTTTTAAATGATTATACTTATCAGAAACTATCCCGAGAAATTTCTCAACTTTTTAC
AGATTAA

Upstream 100 bases:

>100_bases
ATTTATAGGGAGATGAGGAGATAGGAAAGTTAGAGTATTAACACAATTTTTTTGTATCTCATATATTTATCAAGTTTTGT
TTATATGCTAGAGAATAATT

Downstream 100 bases:

>100_bases
ACAATCAGGATTAGTTTAAATAGTTGATATTCATTAACCCTATTAACGGGAATTTAGCCAATTTCAATTCTCAACAAACC
TCAAACTATTTTTATAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKTTTTALKEWNVTVNALENGSTIMLLRKGGIREQKGNFTIAHQQVLLYPTFEHQKPDLLKPKYASQVQIVDSGWHPKKI
KISSFAEITNVLPVSDKSILNKLFLSHIWNEKFISNRLKYKPQKMLYILLLRTYKLSQAYEFFYRPEYGGCRSWINLATP
INITNLTPVLNDYTYQKLSREISQLFTD

Sequences:

>Translated_188_residues
MKTTTTALKEWNVTVNALENGSTIMLLRKGGIREQKGNFTIAHQQVLLYPTFEHQKPDLLKPKYASQVQIVDSGWHPKKI
KISSFAEITNVLPVSDKSILNKLFLSHIWNEKFISNRLKYKPQKMLYILLLRTYKLSQAYEFFYRPEYGGCRSWINLATP
INITNLTPVLNDYTYQKLSREISQLFTD
>Mature_188_residues
MKTTTTALKEWNVTVNALENGSTIMLLRKGGIREQKGNFTIAHQQVLLYPTFEHQKPDLLKPKYASQVQIVDSGWHPKKI
KISSFAEITNVLPVSDKSILNKLFLSHIWNEKFISNRLKYKPQKMLYILLLRTYKLSQAYEFFYRPEYGGCRSWINLATP
INITNLTPVLNDYTYQKLSREISQLFTD

Specific function: Unknown

COG id: COG4293

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21919; Mature: 21919

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTTTALKEWNVTVNALENGSTIMLLRKGGIREQKGNFTIAHQQVLLYPTFEHQKPDLL
CCCCHHHHHHCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCC
KPKYASQVQIVDSGWHPKKIKISSFAEITNVLPVSDKSILNKLFLSHIWNEKFISNRLKY
CCCCCCEEEEEECCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCC
KPQKMLYILLLRTYKLSQAYEFFYRPEYGGCRSWINLATPINITNLTPVLNDYTYQKLSR
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEECCCCHHHHHHHHHHHHH
EISQLFTD
HHHHHHCC
>Mature Secondary Structure
MKTTTTALKEWNVTVNALENGSTIMLLRKGGIREQKGNFTIAHQQVLLYPTFEHQKPDLL
CCCCHHHHHHCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCC
KPKYASQVQIVDSGWHPKKIKISSFAEITNVLPVSDKSILNKLFLSHIWNEKFISNRLKY
CCCCCCEEEEEECCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHCC
KPQKMLYILLLRTYKLSQAYEFFYRPEYGGCRSWINLATPINITNLTPVLNDYTYQKLSR
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEECCCCHHHHHHHHHHHHH
EISQLFTD
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA