Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474579

Identifier: 113474579

GI number: 113474579

Start: 1190194

End: 1190901

Strand: Direct

Name: 113474579

Synonym: Tery_0736

Alternate gene names: NA

Gene position: 1190194-1190901 (Clockwise)

Preceding gene: 113474577

Following gene: 113474580

Centisome position: 15.36

GC content: 37.29

Gene sequence:

>708_bases
ATGAATAAGTGGGTAACGGTGTTCAAACGCATAAGGCAGGACTTAAAAAATGACCTAATTGCAGGTCTATTGGTAGTCAT
ACCATTGGCCACCACAATTTGGCTGACTATAACTATTACTTGGTGGGTAATTAATTTTCTCACCAAGATTCCAAAGCAAA
TTAATCCCTTTGATGGTTTACATCCAATTCTGGTGGGTCTACTAAATTTCTTAGTGGGACTAGCAGTACCATTGCTAAGC
ATCCTAATCATAGGACTGATGGCCAGAAATATTGCGGGAAAATGGCTATTAGATTTAGGAGAGAAAATATTACAAGCAAT
TCCATTTGCTGGCTCAATTTATGGCACTCTCAAGCAAATATTAGAAACTCTGCTCAGGGACTCTAACCAGAGATTTCGCC
GTGTGGTATTGGTAGAATACCCACGTCGAGAAATTTGGACTATAGCTTTTGTCACAGGCACTATAGGTAACGAAATTAAA
TCTCATCTAGGAGATTCAATGTTAAGTTTATTCATTCCTACAACTCCAAATCCCACATCTGGTTGGTACGCTATAGTACC
AGAAAAAGATGTGATTAATGTTTCTTTGTCAGTGGAAGATGCTTTTAAAGTTTTAATATCTGGTGGAATAGTAAATCCTA
GTTCAAATTCTGCAGTTAGTGAAGAAAAAATACTCAACAATAAGCTCAAACCAGCACCTCTAGATTAA

Upstream 100 bases:

>100_bases
CAACATTATGAAATGTTAAATGGTTAATTTGAAACCTTAGATATTAAGATATAATAAGTAAGTTTGATTTTAGGCTGGAG
TAAAAAATATCTAGCCAGTT

Downstream 100 bases:

>100_bases
AGAATTAAGATCAACAACTTTTTGCTGAAAAGGATTTAACAGATTAGACCAGAATATAATACAAAGACTATGAAAAAGAC
TCCCCGTTCTACAGCTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MNKWVTVFKRIRQDLKNDLIAGLLVVIPLATTIWLTITITWWVINFLTKIPKQINPFDGLHPILVGLLNFLVGLAVPLLS
ILIIGLMARNIAGKWLLDLGEKILQAIPFAGSIYGTLKQILETLLRDSNQRFRRVVLVEYPRREIWTIAFVTGTIGNEIK
SHLGDSMLSLFIPTTPNPTSGWYAIVPEKDVINVSLSVEDAFKVLISGGIVNPSSNSAVSEEKILNNKLKPAPLD

Sequences:

>Translated_235_residues
MNKWVTVFKRIRQDLKNDLIAGLLVVIPLATTIWLTITITWWVINFLTKIPKQINPFDGLHPILVGLLNFLVGLAVPLLS
ILIIGLMARNIAGKWLLDLGEKILQAIPFAGSIYGTLKQILETLLRDSNQRFRRVVLVEYPRREIWTIAFVTGTIGNEIK
SHLGDSMLSLFIPTTPNPTSGWYAIVPEKDVINVSLSVEDAFKVLISGGIVNPSSNSAVSEEKILNNKLKPAPLD
>Mature_235_residues
MNKWVTVFKRIRQDLKNDLIAGLLVVIPLATTIWLTITITWWVINFLTKIPKQINPFDGLHPILVGLLNFLVGLAVPLLS
ILIIGLMARNIAGKWLLDLGEKILQAIPFAGSIYGTLKQILETLLRDSNQRFRRVVLVEYPRREIWTIAFVTGTIGNEIK
SHLGDSMLSLFIPTTPNPTSGWYAIVPEKDVINVSLSVEDAFKVLISGGIVNPSSNSAVSEEKILNNKLKPAPLD

Specific function: Unknown

COG id: COG2928

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26143; Mature: 26143

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKWVTVFKRIRQDLKNDLIAGLLVVIPLATTIWLTITITWWVINFLTKIPKQINPFDGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
HPILVGLLNFLVGLAVPLLSILIIGLMARNIAGKWLLDLGEKILQAIPFAGSIYGTLKQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LETLLRDSNQRFRRVVLVEYPRREIWTIAFVTGTIGNEIKSHLGDSMLSLFIPTTPNPTS
HHHHHHCCCHHHHEEHEEECCCCHHEEEEEEHHHHHHHHHHHHCHHHHHHEECCCCCCCC
GWYAIVPEKDVINVSLSVEDAFKVLISGGIVNPSSNSAVSEEKILNNKLKPAPLD
CEEEECCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNKWVTVFKRIRQDLKNDLIAGLLVVIPLATTIWLTITITWWVINFLTKIPKQINPFDGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
HPILVGLLNFLVGLAVPLLSILIIGLMARNIAGKWLLDLGEKILQAIPFAGSIYGTLKQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LETLLRDSNQRFRRVVLVEYPRREIWTIAFVTGTIGNEIKSHLGDSMLSLFIPTTPNPTS
HHHHHHCCCHHHHEEHEEECCCCHHEEEEEEHHHHHHHHHHHHCHHHHHHEECCCCCCCC
GWYAIVPEKDVINVSLSVEDAFKVLISGGIVNPSSNSAVSEEKILNNKLKPAPLD
CEEEECCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA