Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474577

Identifier: 113474577

GI number: 113474577

Start: 1184631

End: 1185065

Strand: Direct

Name: 113474577

Synonym: Tery_0734

Alternate gene names: NA

Gene position: 1184631-1185065 (Clockwise)

Preceding gene: 113474575

Following gene: 113474579

Centisome position: 15.29

GC content: 31.72

Gene sequence:

>435_bases
ATGACCTTTATTAAGGCTACACCAATTTTAGCTGATGAGTATGACAAACAAATATTAGTAGGTCAAGATTTTTCTGGTAA
AGACTTAACTAATGATTCATTTACTAAGTCAATTCTGCGTAAAAGTAACTTTAGTAATGCAAATTTGAGTGGAGTTAGTT
TATTTGGCGCTCATTTAGAAGGAGCTAATTTAGAGGGAGCAAATCTTAGTTATTCTACTTTGGATGATGCTGTTTTTAAC
AAAGCAAATTTGACTAATGCTATTTTGGAAGGTGCTTTTGCTTTCCATACTCAATTTCGTGACGCAATTATTGATGGAGC
AGATTTTACTGATGCTTTTTTGCGAAAAGATACTACAAAAGATCTATGCAAAATTGCTCAAGGTAAAAATTCTATTACAG
GTAAGGAAACAAGAGATACACTCTTTTGTAAATAA

Upstream 100 bases:

>100_bases
AAGTAGCATGAATTTTAGACAACAGAAAACTTCCCAAGTTTTAGTCAGCTTTGTCTTTTCATTAGTAGTTTATATGGTTG
CTATGGGGACAATAACTGCT

Downstream 100 bases:

>100_bases
TTTTTATTACCCTAACTCGCAGGAATTAAGGAACACAGAATTAGGACAAATAAACTTTAGATAAACTTTATTGAAATTTT
CCCTTGTCTACCAACGCCCA

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Secreted Pentapeptide Repeats Protein; Pentapeptide Repeat Family Protein

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTFIKATPILADEYDKQILVGQDFSGKDLTNDSFTKSILRKSNFSNANLSGVSLFGAHLEGANLEGANLSYSTLDDAVFN
KANLTNAILEGAFAFHTQFRDAIIDGADFTDAFLRKDTTKDLCKIAQGKNSITGKETRDTLFCK

Sequences:

>Translated_144_residues
MTFIKATPILADEYDKQILVGQDFSGKDLTNDSFTKSILRKSNFSNANLSGVSLFGAHLEGANLEGANLSYSTLDDAVFN
KANLTNAILEGAFAFHTQFRDAIIDGADFTDAFLRKDTTKDLCKIAQGKNSITGKETRDTLFCK
>Mature_143_residues
TFIKATPILADEYDKQILVGQDFSGKDLTNDSFTKSILRKSNFSNANLSGVSLFGAHLEGANLEGANLSYSTLDDAVFNK
ANLTNAILEGAFAFHTQFRDAIIDGADFTDAFLRKDTTKDLCKIAQGKNSITGKETRDTLFCK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15728; Mature: 15597

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFIKATPILADEYDKQILVGQDFSGKDLTNDSFTKSILRKSNFSNANLSGVSLFGAHLE
CCEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCC
GANLEGANLSYSTLDDAVFNKANLTNAILEGAFAFHTQFRDAIIDGADFTDAFLRKDTTK
CCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHH
DLCKIAQGKNSITGKETRDTLFCK
HHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TFIKATPILADEYDKQILVGQDFSGKDLTNDSFTKSILRKSNFSNANLSGVSLFGAHLE
CEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCC
GANLEGANLSYSTLDDAVFNKANLTNAILEGAFAFHTQFRDAIIDGADFTDAFLRKDTTK
CCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHH
DLCKIAQGKNSITGKETRDTLFCK
HHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA