The gene/protein map for NC_007643 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474530

Identifier: 113474530

GI number: 113474530

Start: 1112418

End: 1112711

Strand: Direct

Name: 113474530

Synonym: Tery_0681

Alternate gene names: NA

Gene position: 1112418-1112711 (Clockwise)

Preceding gene: 113474525

Following gene: 113474531

Centisome position: 14.35

GC content: 30.95

Gene sequence:

>294_bases
ATGATAGTACATATAGTTTTATTTAAATGGAACTCAGATACTTCAACAGAAACTATTGCCTCGGTTATGTCTGCTTTGAG
AGGAATGAAAGGGAAGGTTCCAGAAATAATTGATTTATCTTGTGGGGATAATTTCTCAGAATTGTCTCAAGGATTTCAAA
ATGGTTTAGTGGTTCAAGTTAAGGATAAAGCTGCTCTTGATGCTTATGCAAAAAATTCTATTCATCAACAAATTATTCAG
ACTTTGATTAAGCCAATTTTGGCAGATAAAATTACTATTGATTATGAAGTTTAA

Upstream 100 bases:

>100_bases
AAAAAAATATTCGATTCAGTATTTTAAGGATCTGACAATAGATGTCAGGACTGATGACTGATAATTGATAATTAATAACT
AAAATGAGGGATTTATTTAG

Downstream 100 bases:

>100_bases
TCAAATTACAATTGAGAAAATTATCCCTATATTTTAATAAAAAATTATGATTTTGAAACTTGGCATTAAGCATTCAGCTA
TCAGTTATTAACTCATGATC

Product: stress responsive alpha-beta barrel

Products: NA

Alternate protein names: Stress Responsive Alpha-Beta Barrel Domain Protein

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MIVHIVLFKWNSDTSTETIASVMSALRGMKGKVPEIIDLSCGDNFSELSQGFQNGLVVQVKDKAALDAYAKNSIHQQIIQ
TLIKPILADKITIDYEV

Sequences:

>Translated_97_residues
MIVHIVLFKWNSDTSTETIASVMSALRGMKGKVPEIIDLSCGDNFSELSQGFQNGLVVQVKDKAALDAYAKNSIHQQIIQ
TLIKPILADKITIDYEV
>Mature_97_residues
MIVHIVLFKWNSDTSTETIASVMSALRGMKGKVPEIIDLSCGDNFSELSQGFQNGLVVQVKDKAALDAYAKNSIHQQIIQ
TLIKPILADKITIDYEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10708; Mature: 10708

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVHIVLFKWNSDTSTETIASVMSALRGMKGKVPEIIDLSCGDNFSELSQGFQNGLVVQV
CEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCEEEEE
KDKAALDAYAKNSIHQQIIQTLIKPILADKITIDYEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
>Mature Secondary Structure
MIVHIVLFKWNSDTSTETIASVMSALRGMKGKVPEIIDLSCGDNFSELSQGFQNGLVVQV
CEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCEEEEE
KDKAALDAYAKNSIHQQIIQTLIKPILADKITIDYEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA