| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is fbp
Identifier: 113474531
GI number: 113474531
Start: 1114288
End: 1115352
Strand: Direct
Name: fbp
Synonym: Tery_0682
Alternate gene names: 113474531
Gene position: 1114288-1115352 (Clockwise)
Preceding gene: 113474530
Following gene: 113474532
Centisome position: 14.38
GC content: 40.09
Gene sequence:
>1065_bases ATGGTAAATACCCAAGCTCGGGAAGACCTCCACATTCGTCTGGAGGAAACACAGTTATTGGATCGTGACTGTACTACCTT ATCACGTCATGTACTACAGCAACTTCATTTTTCACCGGATGCTCAAGATATAAGCTCCTTAATGAATAGAATAGGTTTGG CCGGGAAGTTAATCGCTCGTCGCCTAACTCGTGCTGGGCTATTAGAAGATACTTTAGGGTTTACTGGCACAGTTAATGTC CAGGGAGAGTCCGTCAAAAAGATGGATATCTATGCCAATGATGTATTTATCTCTGTATTTAAGCAAAGTGGCCTTGTCTG CCGCTTGGCATCTGAAGAGATGGAAAAACCTTATTATATTCCAGAAAATTGTCCAATTGGCCGCTATACTTTGCTTTATG ACCCTCTGGATGGTTCTTCTAATCTAGATACAAATTTAAATGTGGGATCTATATTCTCAGTTCGCCAACAAGAAGGTAAT GATGAAAATGGTTTAGCTCAAGATTTACTTCAAAATGGACATAAACAAATTGCTGCTGGTTATATTCTATATGGACCGAG CACAATGTTGGTATATTCAATAGGTCAAGGAGTACACGCATTTACTCTAGACCCGAGCCTAGGTGAGTTTATTCTTGTTA ATGAGAATATTAAAATTCCAGAACATGGTCCGGTCTACAGTGTGAATGAGGGTAACTTTTGGCAGTGGGATGATAGTATG CGGGATTATATCCGCTATGTTCATCGCCATGAGGGTTATACTGCTCGTTATGGTGGCGCATTAGTGGGAGATTTCCATAG AATTTTATATCAAGGTGGGGTATTTTTGTACCCAGGTACAGTTAAAAAGCCAGAAGGAAAATTACGTCTGTTATATGAAT CAGCTCCAATGGGTTATCTAGTGGAACAAGCAGGTGGGAGAGCTAGCACAGGAACTGAAGAAATATTAGATGTAGTAGCA GATCAACTGCATCAACGGACGCCATTGATTATTGGTAGTAAGGAAGATGTGGCGCTTGTTGAGTCTTTTATTAAAGAACA AAAACGCATTTCTAATCAAGGTTAA
Upstream 100 bases:
>100_bases AAATAAAATAAATCTAAGAAATTCATATCTAAGAAGTAAAGTTCAAATATGAACAACTAGTCTATTGACTGGAGCTACTC AAGATGGAGAAACTACATAT
Downstream 100 bases:
>100_bases TAGCTTGAATTAGGTTATAGATTGAAAGTTGTTGTCAGCATAAATTGTGATTGCACATAGACTTTACTACTCTTAAGAAT AATAGTAAATAAATTTTGAA
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MVNTQAREDLHIRLEETQLLDRDCTTLSRHVLQQLHFSPDAQDISSLMNRIGLAGKLIARRLTRAGLLEDTLGFTGTVNV QGESVKKMDIYANDVFISVFKQSGLVCRLASEEMEKPYYIPENCPIGRYTLLYDPLDGSSNLDTNLNVGSIFSVRQQEGN DENGLAQDLLQNGHKQIAAGYILYGPSTMLVYSIGQGVHAFTLDPSLGEFILVNENIKIPEHGPVYSVNEGNFWQWDDSM RDYIRYVHRHEGYTARYGGALVGDFHRILYQGGVFLYPGTVKKPEGKLRLLYESAPMGYLVEQAGGRASTGTEEILDVVA DQLHQRTPLIIGSKEDVALVESFIKEQKRISNQG
Sequences:
>Translated_354_residues MVNTQAREDLHIRLEETQLLDRDCTTLSRHVLQQLHFSPDAQDISSLMNRIGLAGKLIARRLTRAGLLEDTLGFTGTVNV QGESVKKMDIYANDVFISVFKQSGLVCRLASEEMEKPYYIPENCPIGRYTLLYDPLDGSSNLDTNLNVGSIFSVRQQEGN DENGLAQDLLQNGHKQIAAGYILYGPSTMLVYSIGQGVHAFTLDPSLGEFILVNENIKIPEHGPVYSVNEGNFWQWDDSM RDYIRYVHRHEGYTARYGGALVGDFHRILYQGGVFLYPGTVKKPEGKLRLLYESAPMGYLVEQAGGRASTGTEEILDVVA DQLHQRTPLIIGSKEDVALVESFIKEQKRISNQG >Mature_354_residues MVNTQAREDLHIRLEETQLLDRDCTTLSRHVLQQLHFSPDAQDISSLMNRIGLAGKLIARRLTRAGLLEDTLGFTGTVNV QGESVKKMDIYANDVFISVFKQSGLVCRLASEEMEKPYYIPENCPIGRYTLLYDPLDGSSNLDTNLNVGSIFSVRQQEGN DENGLAQDLLQNGHKQIAAGYILYGPSTMLVYSIGQGVHAFTLDPSLGEFILVNENIKIPEHGPVYSVNEGNFWQWDDSM RDYIRYVHRHEGYTARYGGALVGDFHRILYQGGVFLYPGTVKKPEGKLRLLYESAPMGYLVEQAGGRASTGTEEILDVVA DQLHQRTPLIIGSKEDVALVESFIKEQKRISNQG
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family
Homologues:
Organism=Homo sapiens, GI22907028, Length=322, Percent_Identity=42.8571428571429, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI189083692, Length=338, Percent_Identity=42.0118343195266, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI16579888, Length=338, Percent_Identity=42.0118343195266, Blast_Score=253, Evalue=2e-67, Organism=Escherichia coli, GI1790679, Length=328, Percent_Identity=46.0365853658537, Blast_Score=296, Evalue=2e-81, Organism=Caenorhabditis elegans, GI17508131, Length=323, Percent_Identity=45.8204334365325, Blast_Score=278, Evalue=3e-75, Organism=Saccharomyces cerevisiae, GI6323409, Length=333, Percent_Identity=38.7387387387387, Blast_Score=243, Evalue=4e-65, Organism=Drosophila melanogaster, GI45550998, Length=335, Percent_Identity=42.9850746268657, Blast_Score=272, Evalue=2e-73, Organism=Drosophila melanogaster, GI19921562, Length=335, Percent_Identity=42.9850746268657, Blast_Score=272, Evalue=3e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): F16PA_TRIEI (Q118F5)
Other databases:
- EMBL: CP000393 - RefSeq: YP_720592.1 - ProteinModelPortal: Q118F5 - SMR: Q118F5 - STRING: Q118F5 - GeneID: 4242821 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_0682 - NMPDR: fig|203124.1.peg.635 - eggNOG: COG0158 - HOGENOM: HBG731261 - OMA: YSINEGS - PhylomeDB: Q118F5 - ProtClustDB: PRK09293 - BioCyc: TERY203124:TERY_0682-MONOMER - GO: GO:0005737 - HAMAP: MF_01855 - InterPro: IPR000146 - InterPro: IPR020548 - PANTHER: PTHR11556 - PRINTS: PR00115
Pfam domain/function: PF00316 FBPase
EC number: =3.1.3.11
Molecular weight: Translated: 39588; Mature: 39588
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00124 FBPASE
Important sites: BINDING 229-229 BINDING 257-257 BINDING 287-287
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNTQAREDLHIRLEETQLLDRDCTTLSRHVLQQLHFSPDAQDISSLMNRIGLAGKLIAR CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHH RLTRAGLLEDTLGFTGTVNVQGESVKKMDIYANDVFISVFKQSGLVCRLASEEMEKPYYI HHHHHCCHHHHCCCCEEEEECCCCEEEEEEEHHHHHHEEHHHCCCEEEECHHHCCCCEEC PENCPIGRYTLLYDPLDGSSNLDTNLNVGSIFSVRQQEGNDENGLAQDLLQNGHKQIAAG CCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHCCCCCCHHHHHHHHCCCCEECCC YILYGPSTMLVYSIGQGVHAFTLDPSLGEFILVNENIKIPEHGPVYSVNEGNFWQWDDSM EEEECCCEEEEEECCCCCEEEEECCCCCCEEEEECCEECCCCCCEEECCCCCCEECCHHH RDYIRYVHRHEGYTARYGGALVGDFHRILYQGGVFLYPGTVKKPEGKLRLLYESAPMGYL HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCCHH VEQAGGRASTGTEEILDVVADQLHQRTPLIIGSKEDVALVESFIKEQKRISNQG HHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVNTQAREDLHIRLEETQLLDRDCTTLSRHVLQQLHFSPDAQDISSLMNRIGLAGKLIAR CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHH RLTRAGLLEDTLGFTGTVNVQGESVKKMDIYANDVFISVFKQSGLVCRLASEEMEKPYYI HHHHHCCHHHHCCCCEEEEECCCCEEEEEEEHHHHHHEEHHHCCCEEEECHHHCCCCEEC PENCPIGRYTLLYDPLDGSSNLDTNLNVGSIFSVRQQEGNDENGLAQDLLQNGHKQIAAG CCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEHHHCCCCCCHHHHHHHHCCCCEECCC YILYGPSTMLVYSIGQGVHAFTLDPSLGEFILVNENIKIPEHGPVYSVNEGNFWQWDDSM EEEECCCEEEEEECCCCCEEEEECCCCCCEEEEECCEECCCCCCEEECCCCCCEECCHHH RDYIRYVHRHEGYTARYGGALVGDFHRILYQGGVFLYPGTVKKPEGKLRLLYESAPMGYL HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCCHH VEQAGGRASTGTEEILDVVADQLHQRTPLIIGSKEDVALVESFIKEQKRISNQG HHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA