Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474525

Identifier: 113474525

GI number: 113474525

Start: 1107525

End: 1107776

Strand: Direct

Name: 113474525

Synonym: Tery_0676

Alternate gene names: NA

Gene position: 1107525-1107776 (Clockwise)

Preceding gene: 113474523

Following gene: 113474530

Centisome position: 14.29

GC content: 37.3

Gene sequence:

>252_bases
ATGTTAACTGACACTCTCACAATTCGTCACTATCAAAAACTAACCGACGCCCTCGTCGAAATGTGGAACCGTGGTTATCG
CTATGAGGAAATGCGTATATATTTAGATGGCTACCTGGCATCTTTAAGAATCTCTAAAGCGATCGAACCATTTTTAATCA
ACAGATTGGAGGAAGAAACGACTCGCTACATGTATGACCCTTCAAATTTTGAAATACAATTACAAACTCAACCAGAATTA
GATTTGTATTAA

Upstream 100 bases:

>100_bases
AAAAAAGTAGTATAATTTGCATTAAAGAGAAAATAATATTAACCTAAAGTTAGGTTCTAATAACATTAAGATAACCATTT
AGCTTGGGAACAGAAAAGTA

Downstream 100 bases:

>100_bases
ATTCTTAAGTCTAAGTAGGGTTTGCTGAAAAAATTTTTATAGGCGAGATTTGTTGTACGGAATTAGAAATAAGGAGGTAC
GGATAAATGACAATTACACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MLTDTLTIRHYQKLTDALVEMWNRGYRYEEMRIYLDGYLASLRISKAIEPFLINRLEEETTRYMYDPSNFEIQLQTQPEL
DLY

Sequences:

>Translated_83_residues
MLTDTLTIRHYQKLTDALVEMWNRGYRYEEMRIYLDGYLASLRISKAIEPFLINRLEEETTRYMYDPSNFEIQLQTQPEL
DLY
>Mature_83_residues
MLTDTLTIRHYQKLTDALVEMWNRGYRYEEMRIYLDGYLASLRISKAIEPFLINRLEEETTRYMYDPSNFEIQLQTQPEL
DLY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10132; Mature: 10132

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTDTLTIRHYQKLTDALVEMWNRGYRYEEMRIYLDGYLASLRISKAIEPFLINRLEEET
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
TRYMYDPSNFEIQLQTQPELDLY
HHEEECCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MLTDTLTIRHYQKLTDALVEMWNRGYRYEEMRIYLDGYLASLRISKAIEPFLINRLEEET
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
TRYMYDPSNFEIQLQTQPELDLY
HHEEECCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA