| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474525
Identifier: 113474525
GI number: 113474525
Start: 1107525
End: 1107776
Strand: Direct
Name: 113474525
Synonym: Tery_0676
Alternate gene names: NA
Gene position: 1107525-1107776 (Clockwise)
Preceding gene: 113474523
Following gene: 113474530
Centisome position: 14.29
GC content: 37.3
Gene sequence:
>252_bases ATGTTAACTGACACTCTCACAATTCGTCACTATCAAAAACTAACCGACGCCCTCGTCGAAATGTGGAACCGTGGTTATCG CTATGAGGAAATGCGTATATATTTAGATGGCTACCTGGCATCTTTAAGAATCTCTAAAGCGATCGAACCATTTTTAATCA ACAGATTGGAGGAAGAAACGACTCGCTACATGTATGACCCTTCAAATTTTGAAATACAATTACAAACTCAACCAGAATTA GATTTGTATTAA
Upstream 100 bases:
>100_bases AAAAAAGTAGTATAATTTGCATTAAAGAGAAAATAATATTAACCTAAAGTTAGGTTCTAATAACATTAAGATAACCATTT AGCTTGGGAACAGAAAAGTA
Downstream 100 bases:
>100_bases ATTCTTAAGTCTAAGTAGGGTTTGCTGAAAAAATTTTTATAGGCGAGATTTGTTGTACGGAATTAGAAATAAGGAGGTAC GGATAAATGACAATTACACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MLTDTLTIRHYQKLTDALVEMWNRGYRYEEMRIYLDGYLASLRISKAIEPFLINRLEEETTRYMYDPSNFEIQLQTQPEL DLY
Sequences:
>Translated_83_residues MLTDTLTIRHYQKLTDALVEMWNRGYRYEEMRIYLDGYLASLRISKAIEPFLINRLEEETTRYMYDPSNFEIQLQTQPEL DLY >Mature_83_residues MLTDTLTIRHYQKLTDALVEMWNRGYRYEEMRIYLDGYLASLRISKAIEPFLINRLEEETTRYMYDPSNFEIQLQTQPEL DLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10132; Mature: 10132
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTDTLTIRHYQKLTDALVEMWNRGYRYEEMRIYLDGYLASLRISKAIEPFLINRLEEET CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH TRYMYDPSNFEIQLQTQPELDLY HHEEECCCCCEEEEECCCCCCCC >Mature Secondary Structure MLTDTLTIRHYQKLTDALVEMWNRGYRYEEMRIYLDGYLASLRISKAIEPFLINRLEEET CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH TRYMYDPSNFEIQLQTQPELDLY HHEEECCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA