Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474150

Identifier: 113474150

GI number: 113474150

Start: 395770

End: 395910

Strand: Reverse

Name: 113474150

Synonym: Tery_0254

Alternate gene names: NA

Gene position: 395910-395770 (Counterclockwise)

Preceding gene: 113474152

Following gene: 113474149

Centisome position: 5.11

GC content: 26.95

Gene sequence:

>141_bases
TTGGAGTTATCTGAAAAGGTATTAGAAGCAAGTTATAAGTGGGCAAATTCTAATAATACTAAAGCTCAATTGTTGATTAA
TTTAGGTAATAATCTACTTTATCAAGCCAAAAATATTGCTAATATTGAGGCTAATATTTGA

Upstream 100 bases:

>100_bases
TAACTTAGAAAATATTCTGCAAAAGTTTCAAATATCAAATACTAGCCTTAATTTTCAGTGGTTACAAATTTTAGGAAATG
GACTACTGGCATTCGGTAAA

Downstream 100 bases:

>100_bases
CTCTCCACCGATGATCAAAAACTTAAAACCCTAGTTAATCAAAATTTATCTAATTATCAAGAAGCTGTAAATATTTATAC
TGACAAATTAGTTCAAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MELSEKVLEASYKWANSNNTKAQLLINLGNNLLYQAKNIANIEANI

Sequences:

>Translated_46_residues
MELSEKVLEASYKWANSNNTKAQLLINLGNNLLYQAKNIANIEANI
>Mature_46_residues
MELSEKVLEASYKWANSNNTKAQLLINLGNNLLYQAKNIANIEANI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5164; Mature: 5164

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSEKVLEASYKWANSNNTKAQLLINLGNNLLYQAKNIANIEANI
CCHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEECC
>Mature Secondary Structure
MELSEKVLEASYKWANSNNTKAQLLINLGNNLLYQAKNIANIEANI
CCHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA