Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474152

Identifier: 113474152

GI number: 113474152

Start: 399270

End: 400796

Strand: Reverse

Name: 113474152

Synonym: Tery_0256

Alternate gene names: NA

Gene position: 400796-399270 (Counterclockwise)

Preceding gene: 113474155

Following gene: 113474150

Centisome position: 5.17

GC content: 29.27

Gene sequence:

>1527_bases
ATGACTTTTCGTAGAAATCTATTTACTCATCTTTTTCCATATATATTATTATTTATAATAACGGCGATCGCTCTCTACAT
TACTAAACCAGTCTCTCTACAAATTCGCTGGAATGATGAAACACTTTACTATACTGTAGCTCAAAATATTGTCCGTCATT
TTGATTTTAATAGTAATCATTATTTGGCTAGTAGTATTATTCAAAAAGGCTATCCAACTAAGGATACTCATCTCCCTGGT
TATCCCATCATATTGGCCTTTGGTTTTTTGATTGGTGGAATTAATGAGGCTACACCATTTTTTGTTAATTATCTACTCCT
TATTTTGACGATTTTTTTAATTTTTACAGTTGGCAGATTAATTGCGAATCAATGGGTGGGCTTTGGGGCTAGTTTGATTT
ATTTGGTTTATCCTTATACTTTAGTTTTGACTCATTCAGTCATGACAGAAATATCGGCTGCCGCTGTTATTATGGTAGTT
GTTGCTATTTTGTTTCTACAAAAAGAAAGTTTTTTAAAAGGGCTATTTTTAGGTTTAGCAATAGCTTTAGCATATTTAAT
TAAACCATTTTTATTGACTTTGTTTATTACCAGTACTACTCTTTTGTGGATTGAGAAAAGTAAACATTACAAAAAAACTT
TATTAAGCTTACTTTTTTCTTTTGGATTACTGTTTGTTACTGTTTTAATTCCCCTTTCTCAAAATCAAGAAATTTATCCC
TATGCAGCAACGAGAATTTTATCCCAATCTAATTTGACTGATATGCTGAGAATGATCTGGGAAAACTTTCTATTTAATTG
TACTCTCGTAATTAATTTTAAAAGGTTTCCAGTCTATGGAACAATTACTATTTCAATGTTTCTGTTATGGAGTATTACTT
TAGCTGTACTAGCAACAGCAAGTCATCAAAAAAAATTACAAAAATGGGAAAAATATACACATTTATGTGTTTTTAGTTTA
ATTAATTTTATGTCAGCTTTACTAGCATTTTTATTACTTTATCAATATATTAATGCAACAAGAGGGTTATCAGTTTTTTC
TCCATTAATGGCAATTTTATCTGTGACTAGTTTGTGGCTATTGATACCACAATTAAAAATCCAAAAAGTAGTAGCTAGTG
GATTAGGAATTTGTCTTTGTTTAAGTTATTCAAACTTTGTGACTTTTCACAAACTAAAAAATCTCCAACGGCGACAGTAT
CAACGTTTATATACTTATAGTTCACGGTTGGAAAAAGTAATATTAAAATTATCAATTCAACCACAAGTAGTTATGTCTAA
TAAAAACTTTTATTTAGCGATCGCTAATTATCCGACTCAAGTTATTTGGCAATTACCTCAAACATTACAAGAGCTACAGC
AAGTTGACAAAGAAGTAAGTATAGATCTAATAGAGTTAAAAGATTCTGATCCAATATTTCAAGAAAATTTGCAAGTTTAT
GGTAATATCAATCTATTAGATAACCGTTATATTTTGCAATACCAAAATCAGGGTTTTTATTACTATTTACAAAAACATAA
ACTATAG

Upstream 100 bases:

>100_bases
AATCTGTAATTCTCAAGTATTAACCTGCTTACCCCAAAGCTAAGTTATATTATTTACCTATTCTTACTTTGTTTATAGTT
TCTTTCTTCTAACTTCAAAA

Downstream 100 bases:

>100_bases
ATTAACTATAGAAAAAAAAGCTTTATATAATCTGAAAAATATTATTAAATCAGGGTTTTAATGATATCAGCATAGAAGAA
AAAAAATAACATTTTTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MTFRRNLFTHLFPYILLFIITAIALYITKPVSLQIRWNDETLYYTVAQNIVRHFDFNSNHYLASSIIQKGYPTKDTHLPG
YPIILAFGFLIGGINEATPFFVNYLLLILTIFLIFTVGRLIANQWVGFGASLIYLVYPYTLVLTHSVMTEISAAAVIMVV
VAILFLQKESFLKGLFLGLAIALAYLIKPFLLTLFITSTTLLWIEKSKHYKKTLLSLLFSFGLLFVTVLIPLSQNQEIYP
YAATRILSQSNLTDMLRMIWENFLFNCTLVINFKRFPVYGTITISMFLLWSITLAVLATASHQKKLQKWEKYTHLCVFSL
INFMSALLAFLLLYQYINATRGLSVFSPLMAILSVTSLWLLIPQLKIQKVVASGLGICLCLSYSNFVTFHKLKNLQRRQY
QRLYTYSSRLEKVILKLSIQPQVVMSNKNFYLAIANYPTQVIWQLPQTLQELQQVDKEVSIDLIELKDSDPIFQENLQVY
GNINLLDNRYILQYQNQGFYYYLQKHKL

Sequences:

>Translated_508_residues
MTFRRNLFTHLFPYILLFIITAIALYITKPVSLQIRWNDETLYYTVAQNIVRHFDFNSNHYLASSIIQKGYPTKDTHLPG
YPIILAFGFLIGGINEATPFFVNYLLLILTIFLIFTVGRLIANQWVGFGASLIYLVYPYTLVLTHSVMTEISAAAVIMVV
VAILFLQKESFLKGLFLGLAIALAYLIKPFLLTLFITSTTLLWIEKSKHYKKTLLSLLFSFGLLFVTVLIPLSQNQEIYP
YAATRILSQSNLTDMLRMIWENFLFNCTLVINFKRFPVYGTITISMFLLWSITLAVLATASHQKKLQKWEKYTHLCVFSL
INFMSALLAFLLLYQYINATRGLSVFSPLMAILSVTSLWLLIPQLKIQKVVASGLGICLCLSYSNFVTFHKLKNLQRRQY
QRLYTYSSRLEKVILKLSIQPQVVMSNKNFYLAIANYPTQVIWQLPQTLQELQQVDKEVSIDLIELKDSDPIFQENLQVY
GNINLLDNRYILQYQNQGFYYYLQKHKL
>Mature_507_residues
TFRRNLFTHLFPYILLFIITAIALYITKPVSLQIRWNDETLYYTVAQNIVRHFDFNSNHYLASSIIQKGYPTKDTHLPGY
PIILAFGFLIGGINEATPFFVNYLLLILTIFLIFTVGRLIANQWVGFGASLIYLVYPYTLVLTHSVMTEISAAAVIMVVV
AILFLQKESFLKGLFLGLAIALAYLIKPFLLTLFITSTTLLWIEKSKHYKKTLLSLLFSFGLLFVTVLIPLSQNQEIYPY
AATRILSQSNLTDMLRMIWENFLFNCTLVINFKRFPVYGTITISMFLLWSITLAVLATASHQKKLQKWEKYTHLCVFSLI
NFMSALLAFLLLYQYINATRGLSVFSPLMAILSVTSLWLLIPQLKIQKVVASGLGICLCLSYSNFVTFHKLKNLQRRQYQ
RLYTYSSRLEKVILKLSIQPQVVMSNKNFYLAIANYPTQVIWQLPQTLQELQQVDKEVSIDLIELKDSDPIFQENLQVYG
NINLLDNRYILQYQNQGFYYYLQKHKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58814; Mature: 58682

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRRNLFTHLFPYILLFIITAIALYITKPVSLQIRWNDETLYYTVAQNIVRHFDFNSNH
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEHHHHHHHHHHCCCCCCC
YLASSIIQKGYPTKDTHLPGYPIILAFGFLIGGINEATPFFVNYLLLILTIFLIFTVGRL
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IANQWVGFGASLIYLVYPYTLVLTHSVMTEISAAAVIMVVVAILFLQKESFLKGLFLGLA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALAYLIKPFLLTLFITSTTLLWIEKSKHYKKTLLSLLFSFGLLFVTVLIPLSQNQEIYP
HHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
YAATRILSQSNLTDMLRMIWENFLFNCTLVINFKRFPVYGTITISMFLLWSITLAVLATA
HHHHHHHHHCCHHHHHHHHHHHHHEEEEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHH
SHQKKLQKWEKYTHLCVFSLINFMSALLAFLLLYQYINATRGLSVFSPLMAILSVTSLWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LIPQLKIQKVVASGLGICLCLSYSNFVTFHKLKNLQRRQYQRLYTYSSRLEKVILKLSIQ
HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQVVMSNKNFYLAIANYPTQVIWQLPQTLQELQQVDKEVSIDLIELKDSDPIFQENLQVY
CEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHCCCCEE
GNINLLDNRYILQYQNQGFYYYLQKHKL
EEEEEECCEEEEEEECCCEEEEEEECCC
>Mature Secondary Structure 
TFRRNLFTHLFPYILLFIITAIALYITKPVSLQIRWNDETLYYTVAQNIVRHFDFNSNH
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEHHHHHHHHHHCCCCCCC
YLASSIIQKGYPTKDTHLPGYPIILAFGFLIGGINEATPFFVNYLLLILTIFLIFTVGRL
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IANQWVGFGASLIYLVYPYTLVLTHSVMTEISAAAVIMVVVAILFLQKESFLKGLFLGLA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALAYLIKPFLLTLFITSTTLLWIEKSKHYKKTLLSLLFSFGLLFVTVLIPLSQNQEIYP
HHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
YAATRILSQSNLTDMLRMIWENFLFNCTLVINFKRFPVYGTITISMFLLWSITLAVLATA
HHHHHHHHHCCHHHHHHHHHHHHHEEEEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHH
SHQKKLQKWEKYTHLCVFSLINFMSALLAFLLLYQYINATRGLSVFSPLMAILSVTSLWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LIPQLKIQKVVASGLGICLCLSYSNFVTFHKLKNLQRRQYQRLYTYSSRLEKVILKLSIQ
HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQVVMSNKNFYLAIANYPTQVIWQLPQTLQELQQVDKEVSIDLIELKDSDPIFQENLQVY
CEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHCCCCEE
GNINLLDNRYILQYQNQGFYYYLQKHKL
EEEEEECCEEEEEEECCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA