Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474149

Identifier: 113474149

GI number: 113474149

Start: 392631

End: 393239

Strand: Reverse

Name: 113474149

Synonym: Tery_0251

Alternate gene names: NA

Gene position: 393239-392631 (Counterclockwise)

Preceding gene: 113474150

Following gene: 113474147

Centisome position: 5.07

GC content: 35.3

Gene sequence:

>609_bases
ATGAAACACCAATTAGCCACTGTTGGAAGTTTGACAACTGCCTTAGTCTTAGGGACTATAATTCTGCCATCCCAGGGACA
AACCTGTTATGGATATGGAGCTGAGAGGGCAAATTATGAAACTACAAACTTTAGGATCAATATTTGCGAAACTGGCCAAG
GTGAGTATATATTCATTAGATATCCCCAAAACGGAACTGAGCAAGATTGGTTGATTGTTAGTAATGCTATCAAAAGAGAT
ACTTCTTGGGCAGCTTATGACCCAGTACAAGGGAATGAACATATTATTGGCCCAGACAAATATCATGTATATTCAAGAAT
ACAGAATAGCTTCACAGAACCTGTAATTAATTACCAGGCAAAGGGAAGAATTAAGTCAAAAATTTGTTATGTTTTAAGAC
CAAATGGACTATATATTTTTGAGGCACGTAACTCGGCAAGTCGTAAACTTGGGGTAGTAGAAAATGGTCAAAGAATAGAA
GTTACAGGAAACGAAGAAATTGGTAGTGGGACTCAAAGATTTATAGAATTAACAAGTCCATATCAAGGATATATAGTTTC
TAGAGATAGTAATAGGATATATATTTCAGATTGTTCTCCTATTTTATAA

Upstream 100 bases:

>100_bases
AATTAAACTTAATTTACCTTTTTGAGGATAGATATTTTTTTCAACTTCTGTTAGGATTATTTAGTTTTGCTGGTATCCAA
TGGCAAAAAGGGGAAAAAGA

Downstream 100 bases:

>100_bases
TTTTATTTATAATTTTAATTGCAGGAAAAACAGGATAGAAAAAAAGTATAAATGTTTTAATTTTATTAGGTTTAATGAGT
ATTATCTCATCAGTAATATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKHQLATVGSLTTALVLGTIILPSQGQTCYGYGAERANYETTNFRINICETGQGEYIFIRYPQNGTEQDWLIVSNAIKRD
TSWAAYDPVQGNEHIIGPDKYHVYSRIQNSFTEPVINYQAKGRIKSKICYVLRPNGLYIFEARNSASRKLGVVENGQRIE
VTGNEEIGSGTQRFIELTSPYQGYIVSRDSNRIYISDCSPIL

Sequences:

>Translated_202_residues
MKHQLATVGSLTTALVLGTIILPSQGQTCYGYGAERANYETTNFRINICETGQGEYIFIRYPQNGTEQDWLIVSNAIKRD
TSWAAYDPVQGNEHIIGPDKYHVYSRIQNSFTEPVINYQAKGRIKSKICYVLRPNGLYIFEARNSASRKLGVVENGQRIE
VTGNEEIGSGTQRFIELTSPYQGYIVSRDSNRIYISDCSPIL
>Mature_202_residues
MKHQLATVGSLTTALVLGTIILPSQGQTCYGYGAERANYETTNFRINICETGQGEYIFIRYPQNGTEQDWLIVSNAIKRD
TSWAAYDPVQGNEHIIGPDKYHVYSRIQNSFTEPVINYQAKGRIKSKICYVLRPNGLYIFEARNSASRKLGVVENGQRIE
VTGNEEIGSGTQRFIELTSPYQGYIVSRDSNRIYISDCSPIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22745; Mature: 22745

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHQLATVGSLTTALVLGTIILPSQGQTCYGYGAERANYETTNFRINICETGQGEYIFIR
CCCCHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCEEECEEEEEEEECCCCCEEEEE
YPQNGTEQDWLIVSNAIKRDTSWAAYDPVQGNEHIIGPDKYHVYSRIQNSFTEPVINYQA
CCCCCCCCCEEEEECHHCCCCCCEEECCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEC
KGRIKSKICYVLRPNGLYIFEARNSASRKLGVVENGQRIEVTGNEEIGSGTQRFIELTSP
CCCCCEEEEEEECCCCEEEEECCCCCCCEECEEECCCEEEEECCCCCCCCCEEEEEECCC
YQGYIVSRDSNRIYISDCSPIL
CCCEEEEECCCEEEEECCCCCC
>Mature Secondary Structure
MKHQLATVGSLTTALVLGTIILPSQGQTCYGYGAERANYETTNFRINICETGQGEYIFIR
CCCCHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCEEECEEEEEEEECCCCCEEEEE
YPQNGTEQDWLIVSNAIKRDTSWAAYDPVQGNEHIIGPDKYHVYSRIQNSFTEPVINYQA
CCCCCCCCCEEEEECHHCCCCCCEEECCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEC
KGRIKSKICYVLRPNGLYIFEARNSASRKLGVVENGQRIEVTGNEEIGSGTQRFIELTSP
CCCCCEEEEEEECCCCEEEEECCCCCCCEECEEECCCEEEEECCCCCCCCCEEEEEECCC
YQGYIVSRDSNRIYISDCSPIL
CCCEEEEECCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA