Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474112

Identifier: 113474112

GI number: 113474112

Start: 319663

End: 320403

Strand: Reverse

Name: 113474112

Synonym: Tery_0211

Alternate gene names: NA

Gene position: 320403-319663 (Counterclockwise)

Preceding gene: 113474116

Following gene: 113474111

Centisome position: 4.13

GC content: 34.01

Gene sequence:

>741_bases
ATGACGCTACCACAAAGTTACAAATCTCAGTTGGAATATATTCAACCTTCTCCCAAGTTTAAAAAACTCATTGATGGCCA
AGTTGAGGCTGAAAACTTTCCCGGCTATTCAGTTATTACTCCACCAGAGGATGAGGACTCACAAAACAGTAATTTTTATA
AGTGTTTACAAGAGTGTCAAAAAGAATTAATAGAACTATTAGGCACAAGTTTAATGGTTCCAGTTCCTAGCAATAGTTTT
CATTTTACCTTGGCGGATTTAATTTGGGAAAGTGCCTTTCTAAATGCTAGTCAGAATAATTCTAAATTTGAAGAAAAATT
ACATTCTTGTATTGCAGAAAGTTTTCAGGGGTTATCTGTTTCAGATAATGGCCATAAAGTTAACTGGCAAATTTTCGGAA
TTATAGTCATGACTAGATCAATTGGTGTTTGTTTAGTTCCAAAAGATGAAGTTTCTTATGAACAAGTTCTCAAATTACGT
CGGTCAATTTATCAAAATCCTAATTTCATTGCTCTAGGCATTGAACAGCAATATCATTTGACTGCTCATGTTACCTTGGG
ATATTTTGGGGAAATTCCATCAAATTTAGATATTCCTGGTCTGGGGGAAACTATTTCAAATTTAAATAATAAGTTCTTGG
AGCCTACTCCAGAAATTTTGGTACATCGGGCAGAACTACGAAAGTTTGATAATATGACTAAATACTATCGAGAGTCTGAT
TGGCCTGTTATAGATTTATGA

Upstream 100 bases:

>100_bases
CTCGCCAAAGTAGAGGTAAATTGACATAAAAGCTATTTTTGACAAGGGGAAATTAAGATTGGACGATACATATCAGAATT
ACATTAACCGAGTAGCTCAG

Downstream 100 bases:

>100_bases
TCAAATCAGACCATAATTAACTAGGCATTAATTATGGTCTAATGCATGGCTATGATTTTTCTTTAATGGCAATAATGCTC
TGTATCAATAATGCTTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTLPQSYKSQLEYIQPSPKFKKLIDGQVEAENFPGYSVITPPEDEDSQNSNFYKCLQECQKELIELLGTSLMVPVPSNSF
HFTLADLIWESAFLNASQNNSKFEEKLHSCIAESFQGLSVSDNGHKVNWQIFGIIVMTRSIGVCLVPKDEVSYEQVLKLR
RSIYQNPNFIALGIEQQYHLTAHVTLGYFGEIPSNLDIPGLGETISNLNNKFLEPTPEILVHRAELRKFDNMTKYYRESD
WPVIDL

Sequences:

>Translated_246_residues
MTLPQSYKSQLEYIQPSPKFKKLIDGQVEAENFPGYSVITPPEDEDSQNSNFYKCLQECQKELIELLGTSLMVPVPSNSF
HFTLADLIWESAFLNASQNNSKFEEKLHSCIAESFQGLSVSDNGHKVNWQIFGIIVMTRSIGVCLVPKDEVSYEQVLKLR
RSIYQNPNFIALGIEQQYHLTAHVTLGYFGEIPSNLDIPGLGETISNLNNKFLEPTPEILVHRAELRKFDNMTKYYRESD
WPVIDL
>Mature_245_residues
TLPQSYKSQLEYIQPSPKFKKLIDGQVEAENFPGYSVITPPEDEDSQNSNFYKCLQECQKELIELLGTSLMVPVPSNSFH
FTLADLIWESAFLNASQNNSKFEEKLHSCIAESFQGLSVSDNGHKVNWQIFGIIVMTRSIGVCLVPKDEVSYEQVLKLRR
SIYQNPNFIALGIEQQYHLTAHVTLGYFGEIPSNLDIPGLGETISNLNNKFLEPTPEILVHRAELRKFDNMTKYYRESDW
PVIDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28099; Mature: 27968

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPQSYKSQLEYIQPSPKFKKLIDGQVEAENFPGYSVITPPEDEDSQNSNFYKCLQECQ
CCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHH
KELIELLGTSLMVPVPSNSFHFTLADLIWESAFLNASQNNSKFEEKLHSCIAESFQGLSV
HHHHHHHCCEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEE
SDNGHKVNWQIFGIIVMTRSIGVCLVPKDEVSYEQVLKLRRSIYQNPNFIALGIEQQYHL
CCCCCEEEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEE
TAHVTLGYFGEIPSNLDIPGLGETISNLNNKFLEPTPEILVHRAELRKFDNMTKYYRESD
EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
WPVIDL
CCEECC
>Mature Secondary Structure 
TLPQSYKSQLEYIQPSPKFKKLIDGQVEAENFPGYSVITPPEDEDSQNSNFYKCLQECQ
CCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHH
KELIELLGTSLMVPVPSNSFHFTLADLIWESAFLNASQNNSKFEEKLHSCIAESFQGLSV
HHHHHHHCCEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEE
SDNGHKVNWQIFGIIVMTRSIGVCLVPKDEVSYEQVLKLRRSIYQNPNFIALGIEQQYHL
CCCCCEEEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEE
TAHVTLGYFGEIPSNLDIPGLGETISNLNNKFLEPTPEILVHRAELRKFDNMTKYYRESD
EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
WPVIDL
CCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA