Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474116

Identifier: 113474116

GI number: 113474116

Start: 327191

End: 327484

Strand: Reverse

Name: 113474116

Synonym: Tery_0215

Alternate gene names: NA

Gene position: 327484-327191 (Counterclockwise)

Preceding gene: 113474117

Following gene: 113474112

Centisome position: 4.23

GC content: 42.86

Gene sequence:

>294_bases
ATGGTGAGCTTACCCATCCCATTAGGGGAGATAAGTGAGTGGCGAGAATACAAAGCAGTTAATATTCACACTCAAGTCAA
GGTAGAATTTTTCAAAGATCATGAAGGATTATTCTCTGGAATTAATGGTCAGATTCTAGGTGAAAAGTTGGCCTGCTTGG
GAGACGGCCATGACGGAGTATGGAATATCTTCCCTAAGGTGGGAACAGCAGAGCAGCGGGAAGAAATATTGGACTGCTAT
CATAACCATGGAAAACTTGTACAAAGTGCAAGGTACTCAGGCTCAGATGGATAA

Upstream 100 bases:

>100_bases
CCCCAACTGGGATTTTTTGTATCAAAACATTGTAGGGTGACAGGAATGGGAGGAAATAACTCTCAAAAAGCATATCAGAG
AAATCAGCTTGGATGGAGGA

Downstream 100 bases:

>100_bases
AGTTTGGTATTGTCTCGTCATCTGCTATCTAAGTCAACATAAATGTCAAGGTTTAAATGGTTTGATTCAATATTTGAGAA
AGCATCAATCTCTCATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MVSLPIPLGEISEWREYKAVNIHTQVKVEFFKDHEGLFSGINGQILGEKLACLGDGHDGVWNIFPKVGTAEQREEILDCY
HNHGKLVQSARYSGSDG

Sequences:

>Translated_97_residues
MVSLPIPLGEISEWREYKAVNIHTQVKVEFFKDHEGLFSGINGQILGEKLACLGDGHDGVWNIFPKVGTAEQREEILDCY
HNHGKLVQSARYSGSDG
>Mature_97_residues
MVSLPIPLGEISEWREYKAVNIHTQVKVEFFKDHEGLFSGINGQILGEKLACLGDGHDGVWNIFPKVGTAEQREEILDCY
HNHGKLVQSARYSGSDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10812; Mature: 10812

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLPIPLGEISEWREYKAVNIHTQVKVEFFKDHEGLFSGINGQILGEKLACLGDGHDGV
CCCCCCCCCCHHHHHHCCEECEEEEEEEEEECCCCHHHCCCCCCCCCCCCEECCCCCCCE
WNIFPKVGTAEQREEILDCYHNHGKLVQSARYSGSDG
EECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MVSLPIPLGEISEWREYKAVNIHTQVKVEFFKDHEGLFSGINGQILGEKLACLGDGHDGV
CCCCCCCCCCHHHHHHCCEECEEEEEEEEEECCCCHHHCCCCCCCCCCCCEECCCCCCCE
WNIFPKVGTAEQREEILDCYHNHGKLVQSARYSGSDG
EECCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA