| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474078
Identifier: 113474078
GI number: 113474078
Start: 259770
End: 261428
Strand: Direct
Name: 113474078
Synonym: Tery_0174
Alternate gene names: NA
Gene position: 259770-261428 (Clockwise)
Preceding gene: 113474077
Following gene: 113474079
Centisome position: 3.35
GC content: 38.1
Gene sequence:
>1659_bases ATGAAACCTATATTTCGGGCTATTATTCTAGCCTTCCTGGCATTAACTTTAACAAGTTGTTCATTACCACCAGATCAAAT TGCCTCTCGACTAGAACCTAGTCTTGTTAAAGTATTTTATAAAAATCAACCCGGACATGGAACTGGTTTTTTTGTACCTG GAGAAACAGGAGTTTGTAAGGTACTGACGGCAGCTCATGTTGTGAACAAAGAAGGGGAAAAATTATTACAAACTAAAGAT GGTAATGTCTGGGATGCTGCATCTGTTGAAATGTTTTCAGATGATATAGACTTGGCTTTAGTAACTTTTGAGCCAGAGAA AGAAAAATGTGATTATCCTACTCTCAAAATAGGTAATTCAGAGGATATCAAACAAGGTAGTTCTATATATGTTTCTGGCC TTTCTAGTCGGGATGGGAAGATGCTATCTCAATTTGTTAAAGGAAATGTTACGGCTTTGAATGTTTTTCCACAGGGTTAT AGGGTTTCTTATCAAGCTTTGACTGTCGCTGGAATGAGTGGAGCTCCTGTTATAGATGAGAGGGGTAAGGTGGTGGCAGT TCATGGGATGAGTGATGTGGAAACAGTTAAAGGTTTTAGTTCTTTGAAAACAAGTTGGCCTGAGTTAGAGTTACAGACTA CCTGGCAAGCTGAAGAAGTTGTGAATACTGCTATTAAACATTTGACTTTTTCTTGGGGTATACCTATTAGTTTCTTTAGG GAGTCTCCGTTTTACTATGACTCTGGGGATATCTATGGGTTAAGCTGGTGGATATTTTTGTCTGGTGCAGGAATAGTTGC TGTTAGTTTTATTTATGTTGGTTTCAGGTATTTAAATGTTTCACCATTTATTGCTGAAGTTAATAATTTGAAAACACAAC TCCAGGATGAGGAAGACAAAGGGGAAGAGGTTCAGAAAGAGTTAAAGTCACTAAAAAATAGTTATAAGGGGTTGGAAAGA AAACTGGAAGCGGAAATATCGGAGAGATCTGAGGCTGAGGAGCAAATTCAAACTCTACAAGTTGTTGTGGAAAAACAAAA AGTGTTGGAAGTGCAACTAGAAATTGAGATGTCAACAAGATATCAGGTTGAGGAGCAAATTCAAACTCTACAAGTTGCTG CACAAAAGGAAAGGGAGTTGGAAAGGCAGTTGGAGTTTGAGTCTCAAAATACTGAAGATAAGTCTGGTGTTGATTTATTT CTGGTTTCTGAGGTGGTCGGTGACTATACTAAGTTGCGTGATCTATTGGCGGCTAAACAGTGGCGCGAAGCAGACTTAGA AACATATAAAAGAATGTTAGAGGTGGCGGGCAGAAACTTGAAGGGATCTTTGAGGGTTAAGGATGTGTATAATTTTCCTT GCAAAGATTTAGTGACTATTGACGAACTGTGGATAAAATATAGTGATGGTAAGTTTGGCTTGTCTGTTCAGAAGCAAATT TATGAGAGCATGGGTGGTACGAAAGACTATGACTATAAGGTAATAGAAGATTTTGGAAATAGAGTTGGGTGGCGTCAAGA TGGAAAATGGTTGAGGTATCATTATTTGACTTTTAGTGAGAAGTATGAAATGGGGTGTTTACCAGTAAGTTTTTATCTTG AGAGGGTTGCTTCTCTTCTGTTTGCAGGAATGTGCAAGTTTATAGACTGTGATCTTTAG
Upstream 100 bases:
>100_bases AACTCTTAAGCCTCTGCCTAACAATCAAAAATACAAATGGTTGTAGGTAAAATCAAAAAACAATTAACCTTTAACTTTTG CCCCTTTCTTTTTTATAAAG
Downstream 100 bases:
>100_bases TTGTTTCACTTTTGTTTTTTGATGATTTTTTACTCTTTGAGTTTATCTGATGTTTAGGATATGCTCCTCTTTTACTACTA GAAAAGTGGCTGGGAAGTTG
Product: GUN4-like
Products: NA
Alternate protein names: GUN4 Domain-Containing Protein; GUN4-Like; TPR Domain-Containing Protein; GUN4-Like Family; Serine/Threonine Protein Kinase; TPR Repeat-Containing Protein; GUN4-Like Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Protease; GUN4-Like Family Protein; WD-40 Repeat-Containing Protein; Protein Kinase; Tetratricopeptide Repeat Domain Protein; Trypsin-Like Serine Protease; Serine/Threonine Kinase; Serine Protease; Signal Transduction Protein With Nacht Domain; Signal Transduction Protein With Nacht Domain Protein; Peptidase; GUN4-Like Superfamily; Periplasmic Protein; Gun4 Domain-Containing Protein
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MKPIFRAIILAFLALTLTSCSLPPDQIASRLEPSLVKVFYKNQPGHGTGFFVPGETGVCKVLTAAHVVNKEGEKLLQTKD GNVWDAASVEMFSDDIDLALVTFEPEKEKCDYPTLKIGNSEDIKQGSSIYVSGLSSRDGKMLSQFVKGNVTALNVFPQGY RVSYQALTVAGMSGAPVIDERGKVVAVHGMSDVETVKGFSSLKTSWPELELQTTWQAEEVVNTAIKHLTFSWGIPISFFR ESPFYYDSGDIYGLSWWIFLSGAGIVAVSFIYVGFRYLNVSPFIAEVNNLKTQLQDEEDKGEEVQKELKSLKNSYKGLER KLEAEISERSEAEEQIQTLQVVVEKQKVLEVQLEIEMSTRYQVEEQIQTLQVAAQKERELERQLEFESQNTEDKSGVDLF LVSEVVGDYTKLRDLLAAKQWREADLETYKRMLEVAGRNLKGSLRVKDVYNFPCKDLVTIDELWIKYSDGKFGLSVQKQI YESMGGTKDYDYKVIEDFGNRVGWRQDGKWLRYHYLTFSEKYEMGCLPVSFYLERVASLLFAGMCKFIDCDL
Sequences:
>Translated_552_residues MKPIFRAIILAFLALTLTSCSLPPDQIASRLEPSLVKVFYKNQPGHGTGFFVPGETGVCKVLTAAHVVNKEGEKLLQTKD GNVWDAASVEMFSDDIDLALVTFEPEKEKCDYPTLKIGNSEDIKQGSSIYVSGLSSRDGKMLSQFVKGNVTALNVFPQGY RVSYQALTVAGMSGAPVIDERGKVVAVHGMSDVETVKGFSSLKTSWPELELQTTWQAEEVVNTAIKHLTFSWGIPISFFR ESPFYYDSGDIYGLSWWIFLSGAGIVAVSFIYVGFRYLNVSPFIAEVNNLKTQLQDEEDKGEEVQKELKSLKNSYKGLER KLEAEISERSEAEEQIQTLQVVVEKQKVLEVQLEIEMSTRYQVEEQIQTLQVAAQKERELERQLEFESQNTEDKSGVDLF LVSEVVGDYTKLRDLLAAKQWREADLETYKRMLEVAGRNLKGSLRVKDVYNFPCKDLVTIDELWIKYSDGKFGLSVQKQI YESMGGTKDYDYKVIEDFGNRVGWRQDGKWLRYHYLTFSEKYEMGCLPVSFYLERVASLLFAGMCKFIDCDL >Mature_552_residues MKPIFRAIILAFLALTLTSCSLPPDQIASRLEPSLVKVFYKNQPGHGTGFFVPGETGVCKVLTAAHVVNKEGEKLLQTKD GNVWDAASVEMFSDDIDLALVTFEPEKEKCDYPTLKIGNSEDIKQGSSIYVSGLSSRDGKMLSQFVKGNVTALNVFPQGY RVSYQALTVAGMSGAPVIDERGKVVAVHGMSDVETVKGFSSLKTSWPELELQTTWQAEEVVNTAIKHLTFSWGIPISFFR ESPFYYDSGDIYGLSWWIFLSGAGIVAVSFIYVGFRYLNVSPFIAEVNNLKTQLQDEEDKGEEVQKELKSLKNSYKGLER KLEAEISERSEAEEQIQTLQVVVEKQKVLEVQLEIEMSTRYQVEEQIQTLQVAAQKERELERQLEFESQNTEDKSGVDLF LVSEVVGDYTKLRDLLAAKQWREADLETYKRMLEVAGRNLKGSLRVKDVYNFPCKDLVTIDELWIKYSDGKFGLSVQKQI YESMGGTKDYDYKVIEDFGNRVGWRQDGKWLRYHYLTFSEKYEMGCLPVSFYLERVASLLFAGMCKFIDCDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62576; Mature: 62576
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIFRAIILAFLALTLTSCSLPPDQIASRLEPSLVKVFYKNQPGHGTGFFVPGETGVCK CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHEECCCCCCCCEEEECCCCCHHH VLTAAHVVNKEGEKLLQTKDGNVWDAASVEMFSDDIDLALVTFEPEKEKCDYPTLKIGNS HHHHHHHHCCCCHHHHHCCCCCEECCCCHHEECCCCCEEEEEECCCCCCCCCCEEEECCC EDIKQGSSIYVSGLSSRDGKMLSQFVKGNVTALNVFPQGYRVSYQALTVAGMSGAPVIDE HHHCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCC RGKVVAVHGMSDVETVKGFSSLKTSWPELELQTTWQAEEVVNTAIKHLTFSWGIPISFFR CCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHEEECCCCHHHHC ESPFYYDSGDIYGLSWWIFLSGAGIVAVSFIYVGFRYLNVSPFIAEVNNLKTQLQDEEDK CCCCEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC GEEVQKELKSLKNSYKGLERKLEAEISERSEAEEQIQTLQVVVEKQKVLEVQLEIEMSTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCH YQVEEQIQTLQVAAQKERELERQLEFESQNTEDKSGVDLFLVSEVVGDYTKLRDLLAAKQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH WREADLETYKRMLEVAGRNLKGSLRVKDVYNFPCKDLVTIDELWIKYSDGKFGLSVQKQI HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHEEEHHEEEECCCCCCHHHHHHH YESMGGTKDYDYKVIEDFGNRVGWRQDGKWLRYHYLTFSEKYEMGCLPVSFYLERVASLL HHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHH FAGMCKFIDCDL HHHHHHHHCCCC >Mature Secondary Structure MKPIFRAIILAFLALTLTSCSLPPDQIASRLEPSLVKVFYKNQPGHGTGFFVPGETGVCK CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHEECCCCCCCCEEEECCCCCHHH VLTAAHVVNKEGEKLLQTKDGNVWDAASVEMFSDDIDLALVTFEPEKEKCDYPTLKIGNS HHHHHHHHCCCCHHHHHCCCCCEECCCCHHEECCCCCEEEEEECCCCCCCCCCEEEECCC EDIKQGSSIYVSGLSSRDGKMLSQFVKGNVTALNVFPQGYRVSYQALTVAGMSGAPVIDE HHHCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCCCCCCC RGKVVAVHGMSDVETVKGFSSLKTSWPELELQTTWQAEEVVNTAIKHLTFSWGIPISFFR CCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHEEECCCCHHHHC ESPFYYDSGDIYGLSWWIFLSGAGIVAVSFIYVGFRYLNVSPFIAEVNNLKTQLQDEEDK CCCCEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC GEEVQKELKSLKNSYKGLERKLEAEISERSEAEEQIQTLQVVVEKQKVLEVQLEIEMSTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCH YQVEEQIQTLQVAAQKERELERQLEFESQNTEDKSGVDLFLVSEVVGDYTKLRDLLAAKQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHH WREADLETYKRMLEVAGRNLKGSLRVKDVYNFPCKDLVTIDELWIKYSDGKFGLSVQKQI HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHEEEHHEEEECCCCCCHHHHHHH YESMGGTKDYDYKVIEDFGNRVGWRQDGKWLRYHYLTFSEKYEMGCLPVSFYLERVASLL HHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHH FAGMCKFIDCDL HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA