| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474079
Identifier: 113474079
GI number: 113474079
Start: 262109
End: 262288
Strand: Direct
Name: 113474079
Synonym: Tery_0175
Alternate gene names: NA
Gene position: 262109-262288 (Clockwise)
Preceding gene: 113474078
Following gene: 113474081
Centisome position: 3.38
GC content: 44.44
Gene sequence:
>180_bases TTGGAGCGGTTGGCGCGGGGTTCTGGAGTTTCTGCTCAAGTTTTGAGTCTGGGTGGAATGAGTGCTTCCCCTGTTATGGA TATGAGGGGTAAGGTTTTGGGAGTTTATGGGATAAGTCGTCTGGAAATTATCAAGTCCTTTGTTTTACAAAAAGGAGGTT TATTGACTCAGAATGGTTAG
Upstream 100 bases:
>100_bases TTTAGATGTTCTCAAAATAGGTAGTTCTTTCTATATTTCTGGTTTTCCTAGTCGGGGTTAAAGGCTCCTAACCCAGTTTA TTGAAAGTGATGTTTCTGGT
Downstream 100 bases:
>100_bases CTACTTACGAGGTTGTGCAACGAGTAGAAAGGGATGTTCAAAGTTTGACTTTTTCTTGAGCTCAACTTATGGTTTTTGAC TTGACTAGTACTATTTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MERLARGSGVSAQVLSLGGMSASPVMDMRGKVLGVYGISRLEIIKSFVLQKGGLLTQNG
Sequences:
>Translated_59_residues MERLARGSGVSAQVLSLGGMSASPVMDMRGKVLGVYGISRLEIIKSFVLQKGGLLTQNG >Mature_59_residues MERLARGSGVSAQVLSLGGMSASPVMDMRGKVLGVYGISRLEIIKSFVLQKGGLLTQNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6165; Mature: 6165
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLARGSGVSAQVLSLGGMSASPVMDMRGKVLGVYGISRLEIIKSFVLQKGGLLTQNG CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEECCCC >Mature Secondary Structure MERLARGSGVSAQVLSLGGMSASPVMDMRGKVLGVYGISRLEIIKSFVLQKGGLLTQNG CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA