| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is thrC [H]
Identifier: 113474047
GI number: 113474047
Start: 204811
End: 205926
Strand: Reverse
Name: thrC [H]
Synonym: Tery_0140
Alternate gene names: 113474047
Gene position: 205926-204811 (Counterclockwise)
Preceding gene: 113474052
Following gene: 113474045
Centisome position: 2.66
GC content: 42.03
Gene sequence:
>1116_bases ATGACTTTAGAATTATCATATCAGTCAAAATTATTGTCCCCCTATCAGTCAAAATTACAAGGTTGGCCTGGCTTGATCGA GGCCTATAGATCCTATCTACCTGTCACAGAAGAAACTCCTGTGGTGTCACTGAAAGAAGGTAATACTCCTCTGATTCCTG TGCCAGCCATCGCCGATAAAATAGGCAGACAGGTGGAAGTATTTGTTAAATATGATGGCCTCAATCCCACGGGTAGTTTC AAAGATAGAGGCATGACTTTAGCCATATCTAAGGCTAAAGAGGCAGGAGCTAAAGCAGTAATATGTGCCAGTACAGGCAA TACTTCTGCTGCTGCCGCAGCTTATGCTTTACGGGGTGGGATGCGAGCTTTTGTTTTAATACCTGATGGTTATGTAGCTC TAGGAAAGTTAGCTCAAGCTTTGTTATATGGGGCTGAAGTTTTAGCAATAAAGGGAAACTTTGACCAAGCCCTACAAATT GTCAAGGATGTGGCTAAGAAATATCCCGTGACTTTGGTCAATTCAGTTAATCCCTATCGTCTGGAAGGTCAAAAAACAGG TGCTTTTGAGCTGGTGGATACTTTAGGCGATGCCCCAGATTGGTTATGTATTCCTGTGGGAAATGCCGGAAATATTACTG CATATTGGATGGGATTTTGTCAATACCATAAAAGTAAAAAATGCGATCGCCTACCAAAAATGATGGGCTTTCAGGCTGCA GGAGCAGCACCTATTGTTAAAGGCTATCCTATAGCTCATCCAGAAACAGTGGCCAGTGCTATTAGGATTGGCAACCCTGC TAGTTGGAAAAAAGCAATAGAAGCTCAAAAAGCTAGTCAGGGAAGTTTTACTGCTGTTACTGATGAGGAAATATTAGAAG CTTATCGTTTATTGGCTTCTAATGAAGGGATTTTTTGTGAGCCTGCTAGTGCCGCTTCTGTTGCTGGTTTACTCAAGATT AAAGACCAAGTTCCCAGAGGAGCAAAGATAGTTTGTGTGCTTACTGGTCATGGTCTTAAAGACCCAGATGTAGCAATTAA ACATAGCCATAATGATCACTTTTCCCAGGGAATAGAGCCAACTACGGAGGCAGTTGCTAAAATTATGGGATTATGA
Upstream 100 bases:
>100_bases AAGTTCTAAGGCTCATTTATCTTGTTGCGAAGTGTCAGCTTATAATTCCTCTAATTTCAGTATTAAGAGTAGTCAAATTA AACAATTCAAAACTTTAAAG
Downstream 100 bases:
>100_bases CAAAGTTCCCAGAAGAAAAATATTTTGGGTTTGACAATTAAGTTTTTTCTCTAATCTTTACCAATTGTTGAGGTCTTCCC CGACCTCAAGGCAATAGGTT
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MTLELSYQSKLLSPYQSKLQGWPGLIEAYRSYLPVTEETPVVSLKEGNTPLIPVPAIADKIGRQVEVFVKYDGLNPTGSF KDRGMTLAISKAKEAGAKAVICASTGNTSAAAAAYALRGGMRAFVLIPDGYVALGKLAQALLYGAEVLAIKGNFDQALQI VKDVAKKYPVTLVNSVNPYRLEGQKTGAFELVDTLGDAPDWLCIPVGNAGNITAYWMGFCQYHKSKKCDRLPKMMGFQAA GAAPIVKGYPIAHPETVASAIRIGNPASWKKAIEAQKASQGSFTAVTDEEILEAYRLLASNEGIFCEPASAASVAGLLKI KDQVPRGAKIVCVLTGHGLKDPDVAIKHSHNDHFSQGIEPTTEAVAKIMGL
Sequences:
>Translated_371_residues MTLELSYQSKLLSPYQSKLQGWPGLIEAYRSYLPVTEETPVVSLKEGNTPLIPVPAIADKIGRQVEVFVKYDGLNPTGSF KDRGMTLAISKAKEAGAKAVICASTGNTSAAAAAYALRGGMRAFVLIPDGYVALGKLAQALLYGAEVLAIKGNFDQALQI VKDVAKKYPVTLVNSVNPYRLEGQKTGAFELVDTLGDAPDWLCIPVGNAGNITAYWMGFCQYHKSKKCDRLPKMMGFQAA GAAPIVKGYPIAHPETVASAIRIGNPASWKKAIEAQKASQGSFTAVTDEEILEAYRLLASNEGIFCEPASAASVAGLLKI KDQVPRGAKIVCVLTGHGLKDPDVAIKHSHNDHFSQGIEPTTEAVAKIMGL >Mature_370_residues TLELSYQSKLLSPYQSKLQGWPGLIEAYRSYLPVTEETPVVSLKEGNTPLIPVPAIADKIGRQVEVFVKYDGLNPTGSFK DRGMTLAISKAKEAGAKAVICASTGNTSAAAAAYALRGGMRAFVLIPDGYVALGKLAQALLYGAEVLAIKGNFDQALQIV KDVAKKYPVTLVNSVNPYRLEGQKTGAFELVDTLGDAPDWLCIPVGNAGNITAYWMGFCQYHKSKKCDRLPKMMGFQAAG AAPIVKGYPIAHPETVASAIRIGNPASWKKAIEAQKASQGSFTAVTDEEILEAYRLLASNEGIFCEPASAASVAGLLKIK DQVPRGAKIVCVLTGHGLKDPDVAIKHSHNDHFSQGIEPTTEAVAKIMGL
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 39551; Mature: 39420
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLELSYQSKLLSPYQSKLQGWPGLIEAYRSYLPVTEETPVVSLKEGNTPLIPVPAIADK CEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCHHHHH IGRQVEVFVKYDGLNPTGSFKDRGMTLAISKAKEAGAKAVICASTGNTSAAAAAYALRGG CCCEEEEEEEECCCCCCCCCCCCCEEEEEECHHHCCCCEEEEECCCCCHHHHHHHHHHCC MRAFVLIPDGYVALGKLAQALLYGAEVLAIKGNFDQALQIVKDVAKKYPVTLVNSVNPYR CEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCEEEECCCCCEE LEGQKTGAFELVDTLGDAPDWLCIPVGNAGNITAYWMGFCQYHKSKKCDRLPKMMGFQAA ECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC GAAPIVKGYPIAHPETVASAIRIGNPASWKKAIEAQKASQGSFTAVTDEEILEAYRLLAS CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHC NEGIFCEPASAASVAGLLKIKDQVPRGAKIVCVLTGHGLKDPDVAIKHSHNDHFSQGIEP CCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCCCHHHCCCCH TTEAVAKIMGL HHHHHHHHHCC >Mature Secondary Structure TLELSYQSKLLSPYQSKLQGWPGLIEAYRSYLPVTEETPVVSLKEGNTPLIPVPAIADK EEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCHHHHH IGRQVEVFVKYDGLNPTGSFKDRGMTLAISKAKEAGAKAVICASTGNTSAAAAAYALRGG CCCEEEEEEEECCCCCCCCCCCCCEEEEEECHHHCCCCEEEEECCCCCHHHHHHHHHHCC MRAFVLIPDGYVALGKLAQALLYGAEVLAIKGNFDQALQIVKDVAKKYPVTLVNSVNPYR CEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCEEEECCCCCEE LEGQKTGAFELVDTLGDAPDWLCIPVGNAGNITAYWMGFCQYHKSKKCDRLPKMMGFQAA ECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC GAAPIVKGYPIAHPETVASAIRIGNPASWKKAIEAQKASQGSFTAVTDEEILEAYRLLAS CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHC NEGIFCEPASAASVAGLLKIKDQVPRGAKIVCVLTGHGLKDPDVAIKHSHNDHFSQGIEP CCCEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEECCCCCHHHCCCCH TTEAVAKIMGL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]