| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835415
Identifier: 110835415
GI number: 110835415
Start: 2894441
End: 2894671
Strand: Direct
Name: 110835415
Synonym: ABO_2554
Alternate gene names: NA
Gene position: 2894441-2894671 (Clockwise)
Preceding gene: 110835414
Following gene: 110835419
Centisome position: 92.77
GC content: 51.52
Gene sequence:
>231_bases TTGCCTCTTCAGGCCAAAAAACCGCAAACCATTATTATTGTTCTCGCTCGCCGTTTGCGCCTCCGCCGCTCAACCAGCAA CCACTACCGCAACCCCCACGGCCACCAGAGCCAATGGAAAAATGATGATGCTATTGCGGATAAAGCGCTCGCGCCAGAGC GCCCATTGATAGTAACGATGCATTGCCATACCCCAACCATCACAAACGAACTCTCAGTATATGGACCTTAA
Upstream 100 bases:
>100_bases AGTGGCTAGACGAATCAACGCCTGGAACGTAACAGCAATATCAAATTAACGATTACGCAGGCTGCAGGCGGTGCCGTCAT AAAAAATTCAAACTAAAGCC
Downstream 100 bases:
>100_bases GGCAATATCAAATCGCCCAAATGGAGTATATGCAATAACTGGAAAGCGGCTTTGCCAAACCCTTTAAACGCACGGAATGA CGACAGGCCGATTTGAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MPLQAKKPQTIIIVLARRLRLRRSTSNHYRNPHGHQSQWKNDDAIADKALAPERPLIVTMHCHTPTITNELSVYGP
Sequences:
>Translated_76_residues MPLQAKKPQTIIIVLARRLRLRRSTSNHYRNPHGHQSQWKNDDAIADKALAPERPLIVTMHCHTPTITNELSVYGP >Mature_75_residues PLQAKKPQTIIIVLARRLRLRRSTSNHYRNPHGHQSQWKNDDAIADKALAPERPLIVTMHCHTPTITNELSVYGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8704; Mature: 8573
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLQAKKPQTIIIVLARRLRLRRSTSNHYRNPHGHQSQWKNDDAIADKALAPERPLIVTM CCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE HCHTPTITNELSVYGP ECCCCCCCCCEEECCC >Mature Secondary Structure PLQAKKPQTIIIVLARRLRLRRSTSNHYRNPHGHQSQWKNDDAIADKALAPERPLIVTM CCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE HCHTPTITNELSVYGP ECCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA