Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835414

Identifier: 110835414

GI number: 110835414

Start: 2893248

End: 2894372

Strand: Direct

Name: 110835414

Synonym: ABO_2553

Alternate gene names: NA

Gene position: 2893248-2894372 (Clockwise)

Preceding gene: 110835412

Following gene: 110835415

Centisome position: 92.73

GC content: 56.62

Gene sequence:

>1125_bases
ATGAAGAAAATCGGGAGAAATGCGGGAAAGAATGCAGGGGGGCTGGCGCAGCTGGTCACCCGTTTCGGCAATGAAATTAC
CCAGGTCGTTCAAGATATCCACGGCGCCATAGCCAATCCGTTCCACCTGCGTGGGCACGACTACACCCCCGCCCCCATGG
TCTACGGCTTGGTTCGTTACGGTTTTCGCCAAGTCGGCAATGTGGCCAGCATGGCTGACCTGCTCGCCGACCCACACCAG
GAGTTGCGCGATAGCTTAGACCTGCAAAGCATCATCAACGGTATTTTCGGACAATTATTGGTTGAGCAGCACAACCGTTA
CGCTCTGCCCATGACGCTATTACCAAAAAAACCACCTTTAGCGGATGCTGACACCCTGGTGATTTTCCTGCACGGGCTGT
GCATGAACGACGCCTGCTGGAACAACCCTGCCGCCAACAGTTTCAGCCAGTGGGCTCGCCAGCATTACAACGCAGATATC
CGTTATCTGCGCTACAACACCGGCCTGCATATTTCCGACAATGGCCGCAAATTCGCCGGGCTGCTGGCCCATACGGTCTT
GCCCAAGCGAATAATTCTGGTCGGCCATTCCATGGGCGGGCTAGTAGCGCGCAGCGCACTTTACCAAGGGCGCCAGCGTG
GCGACCATTGGGTGAATAAAGTAACTCACTTGGCTTGCCTGGGCTCACCACATCAAGGCGCCTTACTAGAACGATTTAGC
AACGAAGCTAACCGATTACTAGGCCACACCCCCTACTCGCGGCCATTGATGCGGCTTGCCAACCTGCGCTCCGACGGCAT
TCGCGACCTGCGCTTTGGTTATGTACTGGAAGACCAGTGGCGAGACCGCCCGCTGGATGACCCACGCCCCACCAGCAAGG
TGCCTTTGGATCCGCATGTGCAGCAGCTTTTTATTGCCGGCAGCGTTAGCAAACCCAACCATGCCCACCCCCGTGGCGAT
TGGTTAGTCACGGTAGACAGCGCGCTGGCGGAGCATCTTTACGCGCAAGCGAACCACCTGACCCGTGAATTGTTTTACCA
GATGGGGCACATGGCCATGATTGAGCAAACCCGCACCTACGCGCGGATACAACAGTGGCTAGACGAATCAACGCCTGGAA
CGTAA

Upstream 100 bases:

>100_bases
AAGGCCCGGAGGGCGTAACAGGTTTACCAGAGCAGCCTGGCCCTTTTTCCTTTCTCTGCGCTTTCAGCCGAGTAAGATGA
ACACCATAACAAGGAGAAAC

Downstream 100 bases:

>100_bases
CAGCAATATCAAATTAACGATTACGCAGGCTGCAGGCGGTGCCGTCATAAAAAATTCAAACTAAAGCCTTGCCTCTTCAG
GCCAAAAAACCGCAAACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: PGAP1-Like; PGAP1-Like Protein; Pgap1 Family Protein

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKKIGRNAGKNAGGLAQLVTRFGNEITQVVQDIHGAIANPFHLRGHDYTPAPMVYGLVRYGFRQVGNVASMADLLADPHQ
ELRDSLDLQSIINGIFGQLLVEQHNRYALPMTLLPKKPPLADADTLVIFLHGLCMNDACWNNPAANSFSQWARQHYNADI
RYLRYNTGLHISDNGRKFAGLLAHTVLPKRIILVGHSMGGLVARSALYQGRQRGDHWVNKVTHLACLGSPHQGALLERFS
NEANRLLGHTPYSRPLMRLANLRSDGIRDLRFGYVLEDQWRDRPLDDPRPTSKVPLDPHVQQLFIAGSVSKPNHAHPRGD
WLVTVDSALAEHLYAQANHLTRELFYQMGHMAMIEQTRTYARIQQWLDESTPGT

Sequences:

>Translated_374_residues
MKKIGRNAGKNAGGLAQLVTRFGNEITQVVQDIHGAIANPFHLRGHDYTPAPMVYGLVRYGFRQVGNVASMADLLADPHQ
ELRDSLDLQSIINGIFGQLLVEQHNRYALPMTLLPKKPPLADADTLVIFLHGLCMNDACWNNPAANSFSQWARQHYNADI
RYLRYNTGLHISDNGRKFAGLLAHTVLPKRIILVGHSMGGLVARSALYQGRQRGDHWVNKVTHLACLGSPHQGALLERFS
NEANRLLGHTPYSRPLMRLANLRSDGIRDLRFGYVLEDQWRDRPLDDPRPTSKVPLDPHVQQLFIAGSVSKPNHAHPRGD
WLVTVDSALAEHLYAQANHLTRELFYQMGHMAMIEQTRTYARIQQWLDESTPGT
>Mature_374_residues
MKKIGRNAGKNAGGLAQLVTRFGNEITQVVQDIHGAIANPFHLRGHDYTPAPMVYGLVRYGFRQVGNVASMADLLADPHQ
ELRDSLDLQSIINGIFGQLLVEQHNRYALPMTLLPKKPPLADADTLVIFLHGLCMNDACWNNPAANSFSQWARQHYNADI
RYLRYNTGLHISDNGRKFAGLLAHTVLPKRIILVGHSMGGLVARSALYQGRQRGDHWVNKVTHLACLGSPHQGALLERFS
NEANRLLGHTPYSRPLMRLANLRSDGIRDLRFGYVLEDQWRDRPLDDPRPTSKVPLDPHVQQLFIAGSVSKPNHAHPRGD
WLVTVDSALAEHLYAQANHLTRELFYQMGHMAMIEQTRTYARIQQWLDESTPGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42041; Mature: 42041

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGRNAGKNAGGLAQLVTRFGNEITQVVQDIHGAIANPFHLRGHDYTPAPMVYGLVRY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHH
GFRQVGNVASMADLLADPHQELRDSLDLQSIINGIFGQLLVEQHNRYALPMTLLPKKPPL
HHHHHCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCC
ADADTLVIFLHGLCMNDACWNNPAANSFSQWARQHYNADIRYLRYNTGLHISDNGRKFAG
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEECCCCHHHHH
LLAHTVLPKRIILVGHSMGGLVARSALYQGRQRGDHWVNKVTHLACLGSPHQGALLERFS
HHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
NEANRLLGHTPYSRPLMRLANLRSDGIRDLRFGYVLEDQWRDRPLDDPRPTSKVPLDPHV
HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCCEECHHHCCCCCCCCCCCCCCCCCHHH
QQLFIAGSVSKPNHAHPRGDWLVTVDSALAEHLYAQANHLTRELFYQMGHMAMIEQTRTY
HHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARIQQWLDESTPGT
HHHHHHHHCCCCCC
>Mature Secondary Structure
MKKIGRNAGKNAGGLAQLVTRFGNEITQVVQDIHGAIANPFHLRGHDYTPAPMVYGLVRY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHH
GFRQVGNVASMADLLADPHQELRDSLDLQSIINGIFGQLLVEQHNRYALPMTLLPKKPPL
HHHHHCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCC
ADADTLVIFLHGLCMNDACWNNPAANSFSQWARQHYNADIRYLRYNTGLHISDNGRKFAG
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEECCCCHHHHH
LLAHTVLPKRIILVGHSMGGLVARSALYQGRQRGDHWVNKVTHLACLGSPHQGALLERFS
HHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
NEANRLLGHTPYSRPLMRLANLRSDGIRDLRFGYVLEDQWRDRPLDDPRPTSKVPLDPHV
HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCCEECHHHCCCCCCCCCCCCCCCCCHHH
QQLFIAGSVSKPNHAHPRGDWLVTVDSALAEHLYAQANHLTRELFYQMGHMAMIEQTRTY
HHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARIQQWLDESTPGT
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA