| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835414
Identifier: 110835414
GI number: 110835414
Start: 2893248
End: 2894372
Strand: Direct
Name: 110835414
Synonym: ABO_2553
Alternate gene names: NA
Gene position: 2893248-2894372 (Clockwise)
Preceding gene: 110835412
Following gene: 110835415
Centisome position: 92.73
GC content: 56.62
Gene sequence:
>1125_bases ATGAAGAAAATCGGGAGAAATGCGGGAAAGAATGCAGGGGGGCTGGCGCAGCTGGTCACCCGTTTCGGCAATGAAATTAC CCAGGTCGTTCAAGATATCCACGGCGCCATAGCCAATCCGTTCCACCTGCGTGGGCACGACTACACCCCCGCCCCCATGG TCTACGGCTTGGTTCGTTACGGTTTTCGCCAAGTCGGCAATGTGGCCAGCATGGCTGACCTGCTCGCCGACCCACACCAG GAGTTGCGCGATAGCTTAGACCTGCAAAGCATCATCAACGGTATTTTCGGACAATTATTGGTTGAGCAGCACAACCGTTA CGCTCTGCCCATGACGCTATTACCAAAAAAACCACCTTTAGCGGATGCTGACACCCTGGTGATTTTCCTGCACGGGCTGT GCATGAACGACGCCTGCTGGAACAACCCTGCCGCCAACAGTTTCAGCCAGTGGGCTCGCCAGCATTACAACGCAGATATC CGTTATCTGCGCTACAACACCGGCCTGCATATTTCCGACAATGGCCGCAAATTCGCCGGGCTGCTGGCCCATACGGTCTT GCCCAAGCGAATAATTCTGGTCGGCCATTCCATGGGCGGGCTAGTAGCGCGCAGCGCACTTTACCAAGGGCGCCAGCGTG GCGACCATTGGGTGAATAAAGTAACTCACTTGGCTTGCCTGGGCTCACCACATCAAGGCGCCTTACTAGAACGATTTAGC AACGAAGCTAACCGATTACTAGGCCACACCCCCTACTCGCGGCCATTGATGCGGCTTGCCAACCTGCGCTCCGACGGCAT TCGCGACCTGCGCTTTGGTTATGTACTGGAAGACCAGTGGCGAGACCGCCCGCTGGATGACCCACGCCCCACCAGCAAGG TGCCTTTGGATCCGCATGTGCAGCAGCTTTTTATTGCCGGCAGCGTTAGCAAACCCAACCATGCCCACCCCCGTGGCGAT TGGTTAGTCACGGTAGACAGCGCGCTGGCGGAGCATCTTTACGCGCAAGCGAACCACCTGACCCGTGAATTGTTTTACCA GATGGGGCACATGGCCATGATTGAGCAAACCCGCACCTACGCGCGGATACAACAGTGGCTAGACGAATCAACGCCTGGAA CGTAA
Upstream 100 bases:
>100_bases AAGGCCCGGAGGGCGTAACAGGTTTACCAGAGCAGCCTGGCCCTTTTTCCTTTCTCTGCGCTTTCAGCCGAGTAAGATGA ACACCATAACAAGGAGAAAC
Downstream 100 bases:
>100_bases CAGCAATATCAAATTAACGATTACGCAGGCTGCAGGCGGTGCCGTCATAAAAAATTCAAACTAAAGCCTTGCCTCTTCAG GCCAAAAAACCGCAAACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: PGAP1-Like; PGAP1-Like Protein; Pgap1 Family Protein
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKKIGRNAGKNAGGLAQLVTRFGNEITQVVQDIHGAIANPFHLRGHDYTPAPMVYGLVRYGFRQVGNVASMADLLADPHQ ELRDSLDLQSIINGIFGQLLVEQHNRYALPMTLLPKKPPLADADTLVIFLHGLCMNDACWNNPAANSFSQWARQHYNADI RYLRYNTGLHISDNGRKFAGLLAHTVLPKRIILVGHSMGGLVARSALYQGRQRGDHWVNKVTHLACLGSPHQGALLERFS NEANRLLGHTPYSRPLMRLANLRSDGIRDLRFGYVLEDQWRDRPLDDPRPTSKVPLDPHVQQLFIAGSVSKPNHAHPRGD WLVTVDSALAEHLYAQANHLTRELFYQMGHMAMIEQTRTYARIQQWLDESTPGT
Sequences:
>Translated_374_residues MKKIGRNAGKNAGGLAQLVTRFGNEITQVVQDIHGAIANPFHLRGHDYTPAPMVYGLVRYGFRQVGNVASMADLLADPHQ ELRDSLDLQSIINGIFGQLLVEQHNRYALPMTLLPKKPPLADADTLVIFLHGLCMNDACWNNPAANSFSQWARQHYNADI RYLRYNTGLHISDNGRKFAGLLAHTVLPKRIILVGHSMGGLVARSALYQGRQRGDHWVNKVTHLACLGSPHQGALLERFS NEANRLLGHTPYSRPLMRLANLRSDGIRDLRFGYVLEDQWRDRPLDDPRPTSKVPLDPHVQQLFIAGSVSKPNHAHPRGD WLVTVDSALAEHLYAQANHLTRELFYQMGHMAMIEQTRTYARIQQWLDESTPGT >Mature_374_residues MKKIGRNAGKNAGGLAQLVTRFGNEITQVVQDIHGAIANPFHLRGHDYTPAPMVYGLVRYGFRQVGNVASMADLLADPHQ ELRDSLDLQSIINGIFGQLLVEQHNRYALPMTLLPKKPPLADADTLVIFLHGLCMNDACWNNPAANSFSQWARQHYNADI RYLRYNTGLHISDNGRKFAGLLAHTVLPKRIILVGHSMGGLVARSALYQGRQRGDHWVNKVTHLACLGSPHQGALLERFS NEANRLLGHTPYSRPLMRLANLRSDGIRDLRFGYVLEDQWRDRPLDDPRPTSKVPLDPHVQQLFIAGSVSKPNHAHPRGD WLVTVDSALAEHLYAQANHLTRELFYQMGHMAMIEQTRTYARIQQWLDESTPGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42041; Mature: 42041
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIGRNAGKNAGGLAQLVTRFGNEITQVVQDIHGAIANPFHLRGHDYTPAPMVYGLVRY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHH GFRQVGNVASMADLLADPHQELRDSLDLQSIINGIFGQLLVEQHNRYALPMTLLPKKPPL HHHHHCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCC ADADTLVIFLHGLCMNDACWNNPAANSFSQWARQHYNADIRYLRYNTGLHISDNGRKFAG CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEECCCCHHHHH LLAHTVLPKRIILVGHSMGGLVARSALYQGRQRGDHWVNKVTHLACLGSPHQGALLERFS HHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH NEANRLLGHTPYSRPLMRLANLRSDGIRDLRFGYVLEDQWRDRPLDDPRPTSKVPLDPHV HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCCEECHHHCCCCCCCCCCCCCCCCCHHH QQLFIAGSVSKPNHAHPRGDWLVTVDSALAEHLYAQANHLTRELFYQMGHMAMIEQTRTY HHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARIQQWLDESTPGT HHHHHHHHCCCCCC >Mature Secondary Structure MKKIGRNAGKNAGGLAQLVTRFGNEITQVVQDIHGAIANPFHLRGHDYTPAPMVYGLVRY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHH GFRQVGNVASMADLLADPHQELRDSLDLQSIINGIFGQLLVEQHNRYALPMTLLPKKPPL HHHHHCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCC ADADTLVIFLHGLCMNDACWNNPAANSFSQWARQHYNADIRYLRYNTGLHISDNGRKFAG CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEECCCCHHHHH LLAHTVLPKRIILVGHSMGGLVARSALYQGRQRGDHWVNKVTHLACLGSPHQGALLERFS HHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH NEANRLLGHTPYSRPLMRLANLRSDGIRDLRFGYVLEDQWRDRPLDDPRPTSKVPLDPHV HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCCEECHHHCCCCCCCCCCCCCCCCCHHH QQLFIAGSVSKPNHAHPRGDWLVTVDSALAEHLYAQANHLTRELFYQMGHMAMIEQTRTY HHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARIQQWLDESTPGT HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA