| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835057
Identifier: 110835057
GI number: 110835057
Start: 2506227
End: 2508071
Strand: Reverse
Name: 110835057
Synonym: ABO_2196
Alternate gene names: NA
Gene position: 2508071-2506227 (Counterclockwise)
Preceding gene: 110835058
Following gene: 110835056
Centisome position: 80.38
GC content: 54.25
Gene sequence:
>1845_bases ATGTACCGGATTCCGTTTGCCAAAACAGCACTGGCTACCAAAGTCAGTGCTGTAACTTTAACTGCTATTCTAATGTCTGC CTGTGGTGGTGACAGCGATTCTAACGATCCTGCCGTGCCTGCGGACCCGGTTGGAAAAAGTCTTTCCTTTACCGCGGTGA AAGCCCCGGAAACGGATCTGGAAAAGCGTCAGATCCTGGCGTCTCCCTCCGTTGAAGTAGATGGTGAAACCTACGAGATC GGTTTCCATACCCTGCTGCGTTCCGGCGATGCGGTAAACGGGGATGTGGTCTTCGGTCAATTGGTAGACAAAATGGGGCA GCCGCTCTATGGCAACGACGGTAAGCCGAGTGTTACCGATTCCAATGAGCATACCTCCCTGTTGCCGATCGGTGATCGTT TGTTCTCCGTCTCTCAGATGGAAACTCGTCCTGGTGCCATGTTCCTGATGGAACTGGATCAGAACAAACAGACTGGCCAT CTTTCAGTCAAGGATCTCTGGCAAATCGATCAGTCCGGTGTGGATGGTGGTTGGGTGCACTGTGCTGCCAGTGTGACCCC TTGGAATACCCATTTGGCTAGTGAAGAGTACGAACCGGATGCTTCCGAGCGTGACCCGGTAACCGGTGAAATTGATGGCT ACTACGAGCCGATGGCAGATTACTTTGGGGGTGATCTGACGGCCATGAATCCTTACTGGTGGGGCTGGAATATTGAGATC GCCGTGGCTGCCGAGGGTGATAGTGCACCCACCAGCGATCTCGTCAAACATTACGCCATGGGCCGTCTGGCCTTCGAGCT GGCTTACGTAATGCCTGACGAAAAAACGGTCTACATGACCGATGATGGCACCAACGTGGGCCTCTACATGTTTGTTGCGG ATACGGCCGGTGATCTGAGTGCGGGTAACCTTTATGCCACCAAATGGAACCAGACATCGGCAGCGGGTATCGGTGAAGCG GACCTGGAATGGATAAGCCTGGGCCACGCCAGCAACAGCGATATCGAAGCCCTATTCGCCAGCCCTGACGAGCCGGCATT TACTGATCTTTTCGAAACCGCGACCATGACCGGTGAGGATTGCCCGGATGGTTTCACGGCCACTGCATCCAATGGCAATA AGGAATGCCTGAAAGTAAAACCCGGTATGAAGTTGGCGGCATCCCGTCTTGAGACTCGTCGCTATGCTGCGTTGATGGGG GCGACCACAGAGTTTCGTAAAGAAGAAGGTGTGACTTTCGACCCGGATGGCGGCAAGCTTTATGTGGCCATGAGTGAAGT GGGGCGTGGCATGGAGGATAATTCTTCCAACGATCTGTCCACGATCAACCATGTTCGTATTGCCGAGGCCAATAAGTGTG GTGGGGTCTATGCCCTGGATGTTGCCGCCGATGCGGGCATCGGTTCTGATTATGTGGCGCAGAACATGAAAGGCTTGATT GCCGGTCAGCCTGCCAGCTACCCGGCTGATAGCCCGTTTGCCTCTTACTCCTGTGACGCTGACGGCCTGGCCAATCCGGA TAATGTGACCTTTATCACTGGCTATAACACCTTGGTTATTGGTGAGGACACTGGTTCCGGGCACCAGAATGATGTGATCT GGTCACTGAATCTGGACCAGGTAGATGCGACGGATTTCTCTGCCGGTCTGACTCGTATCCAGACCACCCCCTACGGGTCG GAAACCACCTCTCCCTATTGGTACCCCAACGTGAATGGCTTCGCCTATCTGATGAGTGTGGTGCAGCACCCCTACGGCGA ATCTGACTCCGGCAAGATCCCGGATGGCTCATTGGATCACCGTGCCTATACCGGGTATATCGGTCCGTTCCCGGCCATGG ATTGA
Upstream 100 bases:
>100_bases GTTTTTGTGTTGAACAAATTCTTCTTATCTCCGTGACAGATTTGTCATAAAAAAGCGCTTCACTGTTCGCCTCTGAAAAC AATTCACGGGGAGAACGCTC
Downstream 100 bases:
>100_bases ATATTAATAACGATAACGAGGAGGGCCGGGGTATCCCCGGCCTTTTGCTGCTATGAAAAAGATTTTTTTTATTCTGGGTA TGTCTGCTTTGGTATGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatase; Phosphatase-Like Protein; Exported Alkaline Phosphatase; Cell Surface Protein; Twin-Arginine Translocation Pathway Signal; Phosphatase Or Zinc Metalloprotease With Signal Peptide; PKD Domain Protein; Lipoprotein
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MYRIPFAKTALATKVSAVTLTAILMSACGGDSDSNDPAVPADPVGKSLSFTAVKAPETDLEKRQILASPSVEVDGETYEI GFHTLLRSGDAVNGDVVFGQLVDKMGQPLYGNDGKPSVTDSNEHTSLLPIGDRLFSVSQMETRPGAMFLMELDQNKQTGH LSVKDLWQIDQSGVDGGWVHCAASVTPWNTHLASEEYEPDASERDPVTGEIDGYYEPMADYFGGDLTAMNPYWWGWNIEI AVAAEGDSAPTSDLVKHYAMGRLAFELAYVMPDEKTVYMTDDGTNVGLYMFVADTAGDLSAGNLYATKWNQTSAAGIGEA DLEWISLGHASNSDIEALFASPDEPAFTDLFETATMTGEDCPDGFTATASNGNKECLKVKPGMKLAASRLETRRYAALMG ATTEFRKEEGVTFDPDGGKLYVAMSEVGRGMEDNSSNDLSTINHVRIAEANKCGGVYALDVAADAGIGSDYVAQNMKGLI AGQPASYPADSPFASYSCDADGLANPDNVTFITGYNTLVIGEDTGSGHQNDVIWSLNLDQVDATDFSAGLTRIQTTPYGS ETTSPYWYPNVNGFAYLMSVVQHPYGESDSGKIPDGSLDHRAYTGYIGPFPAMD
Sequences:
>Translated_614_residues MYRIPFAKTALATKVSAVTLTAILMSACGGDSDSNDPAVPADPVGKSLSFTAVKAPETDLEKRQILASPSVEVDGETYEI GFHTLLRSGDAVNGDVVFGQLVDKMGQPLYGNDGKPSVTDSNEHTSLLPIGDRLFSVSQMETRPGAMFLMELDQNKQTGH LSVKDLWQIDQSGVDGGWVHCAASVTPWNTHLASEEYEPDASERDPVTGEIDGYYEPMADYFGGDLTAMNPYWWGWNIEI AVAAEGDSAPTSDLVKHYAMGRLAFELAYVMPDEKTVYMTDDGTNVGLYMFVADTAGDLSAGNLYATKWNQTSAAGIGEA DLEWISLGHASNSDIEALFASPDEPAFTDLFETATMTGEDCPDGFTATASNGNKECLKVKPGMKLAASRLETRRYAALMG ATTEFRKEEGVTFDPDGGKLYVAMSEVGRGMEDNSSNDLSTINHVRIAEANKCGGVYALDVAADAGIGSDYVAQNMKGLI AGQPASYPADSPFASYSCDADGLANPDNVTFITGYNTLVIGEDTGSGHQNDVIWSLNLDQVDATDFSAGLTRIQTTPYGS ETTSPYWYPNVNGFAYLMSVVQHPYGESDSGKIPDGSLDHRAYTGYIGPFPAMD >Mature_614_residues MYRIPFAKTALATKVSAVTLTAILMSACGGDSDSNDPAVPADPVGKSLSFTAVKAPETDLEKRQILASPSVEVDGETYEI GFHTLLRSGDAVNGDVVFGQLVDKMGQPLYGNDGKPSVTDSNEHTSLLPIGDRLFSVSQMETRPGAMFLMELDQNKQTGH LSVKDLWQIDQSGVDGGWVHCAASVTPWNTHLASEEYEPDASERDPVTGEIDGYYEPMADYFGGDLTAMNPYWWGWNIEI AVAAEGDSAPTSDLVKHYAMGRLAFELAYVMPDEKTVYMTDDGTNVGLYMFVADTAGDLSAGNLYATKWNQTSAAGIGEA DLEWISLGHASNSDIEALFASPDEPAFTDLFETATMTGEDCPDGFTATASNGNKECLKVKPGMKLAASRLETRRYAALMG ATTEFRKEEGVTFDPDGGKLYVAMSEVGRGMEDNSSNDLSTINHVRIAEANKCGGVYALDVAADAGIGSDYVAQNMKGLI AGQPASYPADSPFASYSCDADGLANPDNVTFITGYNTLVIGEDTGSGHQNDVIWSLNLDQVDATDFSAGLTRIQTTPYGS ETTSPYWYPNVNGFAYLMSVVQHPYGESDSGKIPDGSLDHRAYTGYIGPFPAMD
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65792; Mature: 65792
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00177 TOPOISOMERASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRIPFAKTALATKVSAVTLTAILMSACGGDSDSNDPAVPADPVGKSLSFTAVKAPETDL CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCH EKRQILASPSVEVDGETYEIGFHTLLRSGDAVNGDVVFGQLVDKMGQPLYGNDGKPSVTD HHHHHHCCCCEEECCCEEEEHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCC SNEHTSLLPIGDRLFSVSQMETRPGAMFLMELDQNKQTGHLSVKDLWQIDQSGVDGGWVH CCCCEEEEECCHHHEEHHHHCCCCCEEEEEEECCCCCCCCEEHHHHHHHHCCCCCCCEEE CAASVTPWNTHLASEEYEPDASERDPVTGEIDGYYEPMADYFGGDLTAMNPYWWGWNIEI EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCEEECEEEEE AVAAEGDSAPTSDLVKHYAMGRLAFELAYVMPDEKTVYMTDDGTNVGLYMFVADTAGDLS EEEECCCCCCHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCC AGNLYATKWNQTSAAGIGEADLEWISLGHASNSDIEALFASPDEPAFTDLFETATMTGED CCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCC CPDGFTATASNGNKECLKVKPGMKLAASRLETRRYAALMGATTEFRKEEGVTFDPDGGKL CCCCCEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEECCCCCEE YVAMSEVGRGMEDNSSNDLSTINHVRIAEANKCGGVYALDVAADAGIGSDYVAQNMKGLI EEEHHHHCCCCCCCCCCCCCHHCEEEEECCCCCCCEEEEEEECCCCCCHHHHHHCCCCEE AGQPASYPADSPFASYSCDADGLANPDNVTFITGYNTLVIGEDTGSGHQNDVIWSLNLDQ ECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEECCCC VDATDFSAGLTRIQTTPYGSETTSPYWYPNVNGFAYLMSVVQHPYGESDSGKIPDGSLDH CCCCCHHHCCEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC RAYTGYIGPFPAMD CEEECCCCCCCCCC >Mature Secondary Structure MYRIPFAKTALATKVSAVTLTAILMSACGGDSDSNDPAVPADPVGKSLSFTAVKAPETDL CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCH EKRQILASPSVEVDGETYEIGFHTLLRSGDAVNGDVVFGQLVDKMGQPLYGNDGKPSVTD HHHHHHCCCCEEECCCEEEEHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCC SNEHTSLLPIGDRLFSVSQMETRPGAMFLMELDQNKQTGHLSVKDLWQIDQSGVDGGWVH CCCCEEEEECCHHHEEHHHHCCCCCEEEEEEECCCCCCCCEEHHHHHHHHCCCCCCCEEE CAASVTPWNTHLASEEYEPDASERDPVTGEIDGYYEPMADYFGGDLTAMNPYWWGWNIEI EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCEEECEEEEE AVAAEGDSAPTSDLVKHYAMGRLAFELAYVMPDEKTVYMTDDGTNVGLYMFVADTAGDLS EEEECCCCCCHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCC AGNLYATKWNQTSAAGIGEADLEWISLGHASNSDIEALFASPDEPAFTDLFETATMTGED CCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCC CPDGFTATASNGNKECLKVKPGMKLAASRLETRRYAALMGATTEFRKEEGVTFDPDGGKL CCCCCEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEECCCCCEE YVAMSEVGRGMEDNSSNDLSTINHVRIAEANKCGGVYALDVAADAGIGSDYVAQNMKGLI EEEHHHHCCCCCCCCCCCCCHHCEEEEECCCCCCCEEEEEEECCCCCCHHHHHHCCCCEE AGQPASYPADSPFASYSCDADGLANPDNVTFITGYNTLVIGEDTGSGHQNDVIWSLNLDQ ECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEECCCC VDATDFSAGLTRIQTTPYGSETTSPYWYPNVNGFAYLMSVVQHPYGESDSGKIPDGSLDH CCCCCHHHCCEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC RAYTGYIGPFPAMD CEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA