Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835056

Identifier: 110835056

GI number: 110835056

Start: 2504504

End: 2506174

Strand: Reverse

Name: 110835056

Synonym: ABO_2195

Alternate gene names: NA

Gene position: 2506174-2504504 (Counterclockwise)

Preceding gene: 110835057

Following gene: 110835054

Centisome position: 80.32

GC content: 56.37

Gene sequence:

>1671_bases
ATGAAAAAGATTTTTTTTATTCTGGGTATGTCTGCTTTGGTATGGCAGCTGAGCGGTTGCGGCCAATCTGATGCGTCGCA
GGCGGAAAATTTGGGGCGCCTGTATTTGTCCAACCCGGCGGCGACGATTCCGCCACAGTGTTATACCAAAACCGAAGATG
CCAAGGGGGTTGAGAGTAACCCCTGTTATGTCTGCCATACCGCCAGTAAAGAGCCGAATTTCACTAACGATCTTGATTTG
CAGCTGGCCTACGATTTTGCCGGGCCCGCTACCGTCAATCGCTGGGAGAATCTTTTCGTTGATCGCAGTGAAGCGCGTGA
AGCGATCAGTGATGAGGCGATTTTGGCTTATGTGCGAACCGATAATTATCAATCCGGGGGCGCGGTGCAGCTGGCCGAAA
CCCTGACAGGAAAATTGCCTGCGCATTGGGATGGTGATGGTAATGGACACTGGGATGGTTACGTGCCTGACGTGTCCTAC
CGCTTTGATGAGCATGGCTTTGACCTCGACGCAGAAGGTGAGCCGACGGGTTGGCGTGCATTGGCCTATACGCCGTTCCC
GGGGGCATTTTTTCCCACTAATGGTTCTGCGGATGATGTGCTGATTCGCTTGGATTCTCCGTATCAACAGAACGAAAAAG
GCGAGCCCGACATGCGGGTTTACCGTCTCAATCTGGCGATTGTGGAGTCGCTGATCAAGCGTGAGAGTGTGGCGATAGAG
GCGGTGGCGGAAGCCGAGTACGGGGTCGACTTGAATCGCAACGGTGTACTGGATCGTGCTACTGAAGTGGTATTCGACTG
GGCTCCCCTTGAAGGGCGTGAGATGGAGTATGTGGGGCTGGCCAGGGTGGCCCAGCAACAGGGTGCAGCGCCACTGTCAG
CAGGGGCTTATCCGCTGGGCACCGAGTTTGTACATAGCGTCCGCTATCTGGATATTGCCGACGATGGCGAAGTGGTTATG
GCGCCGCGAATGAAGGAGCTGCGCTACAGTCGTAAAACACGTTGGCTGACATATTTTCAGCACCGGGAGCTGGCGGATGA
TGAGCTCAAGGATGCCCATGATTTTCCTGATCGCATGGAGCCTGTCATCGGGGATATAGAGCGCGGGGTGGGCAATCGCC
GTGGCTGGCGTTTCAGTGGCTTCATCGAGGATGACCAGGGCGAGCTGCGGCCGCAGTCGTATGAGGAGCTGGCCACCTGC
GCCGGATGTCATGGGGCTGTGGGTGCGCTGACCGATAGTACCTACACCATGGAAAGAAAGCTGGATGCCAGTCAGGGGTT
TCAGCGGGGCTGGTATCACTGGAATCAGAAAAGCCTGGGAGGTATTCCCGAGCCACAACGGGAAGATGGTCGTGGCGAGT
ATGCGTTTTACTTGGAGCAGGTAGGTGGAGCGGATGAGTACCGGTCCAATCAGGAGGTGCGTGAGCGTTTCTTTGATGAG
GAGGGGGGCTTGAGGCCGGCCATGTTGACGCAACTGGAAGGTGATATCAGTGCGCTGGTGGTGCCCTCCGCCCGCCGGGC
ACTGGAATTGAACAAGGCATACCTGTCTGTCGTTGAGGAGCAGAGTTATATCCGCGGCCGCGATGCGGTGCTCGCCCCAA
TGGTCAATGTGCACAAAGAGGTGGAGGCCGGGCAGCGTACAGCCATAACCGAACCGGTGACCTATCGCTGA

Upstream 100 bases:

>100_bases
CACCGTGCCTATACCGGGTATATCGGTCCGTTCCCGGCCATGGATTGAATATTAATAACGATAACGAGGAGGGCCGGGGT
ATCCCCGGCCTTTTGCTGCT

Downstream 100 bases:

>100_bases
GACCGCGCAGCGTGCCTGCTTCGCAGATCTGTCGAGAGCGAATGGAGATTTCCCGTCGCAGGTTTACTTGCGGCGGGTAA
TCACAATCAGGGCCACGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MKKIFFILGMSALVWQLSGCGQSDASQAENLGRLYLSNPAATIPPQCYTKTEDAKGVESNPCYVCHTASKEPNFTNDLDL
QLAYDFAGPATVNRWENLFVDRSEAREAISDEAILAYVRTDNYQSGGAVQLAETLTGKLPAHWDGDGNGHWDGYVPDVSY
RFDEHGFDLDAEGEPTGWRALAYTPFPGAFFPTNGSADDVLIRLDSPYQQNEKGEPDMRVYRLNLAIVESLIKRESVAIE
AVAEAEYGVDLNRNGVLDRATEVVFDWAPLEGREMEYVGLARVAQQQGAAPLSAGAYPLGTEFVHSVRYLDIADDGEVVM
APRMKELRYSRKTRWLTYFQHRELADDELKDAHDFPDRMEPVIGDIERGVGNRRGWRFSGFIEDDQGELRPQSYEELATC
AGCHGAVGALTDSTYTMERKLDASQGFQRGWYHWNQKSLGGIPEPQREDGRGEYAFYLEQVGGADEYRSNQEVRERFFDE
EGGLRPAMLTQLEGDISALVVPSARRALELNKAYLSVVEEQSYIRGRDAVLAPMVNVHKEVEAGQRTAITEPVTYR

Sequences:

>Translated_556_residues
MKKIFFILGMSALVWQLSGCGQSDASQAENLGRLYLSNPAATIPPQCYTKTEDAKGVESNPCYVCHTASKEPNFTNDLDL
QLAYDFAGPATVNRWENLFVDRSEAREAISDEAILAYVRTDNYQSGGAVQLAETLTGKLPAHWDGDGNGHWDGYVPDVSY
RFDEHGFDLDAEGEPTGWRALAYTPFPGAFFPTNGSADDVLIRLDSPYQQNEKGEPDMRVYRLNLAIVESLIKRESVAIE
AVAEAEYGVDLNRNGVLDRATEVVFDWAPLEGREMEYVGLARVAQQQGAAPLSAGAYPLGTEFVHSVRYLDIADDGEVVM
APRMKELRYSRKTRWLTYFQHRELADDELKDAHDFPDRMEPVIGDIERGVGNRRGWRFSGFIEDDQGELRPQSYEELATC
AGCHGAVGALTDSTYTMERKLDASQGFQRGWYHWNQKSLGGIPEPQREDGRGEYAFYLEQVGGADEYRSNQEVRERFFDE
EGGLRPAMLTQLEGDISALVVPSARRALELNKAYLSVVEEQSYIRGRDAVLAPMVNVHKEVEAGQRTAITEPVTYR
>Mature_556_residues
MKKIFFILGMSALVWQLSGCGQSDASQAENLGRLYLSNPAATIPPQCYTKTEDAKGVESNPCYVCHTASKEPNFTNDLDL
QLAYDFAGPATVNRWENLFVDRSEAREAISDEAILAYVRTDNYQSGGAVQLAETLTGKLPAHWDGDGNGHWDGYVPDVSY
RFDEHGFDLDAEGEPTGWRALAYTPFPGAFFPTNGSADDVLIRLDSPYQQNEKGEPDMRVYRLNLAIVESLIKRESVAIE
AVAEAEYGVDLNRNGVLDRATEVVFDWAPLEGREMEYVGLARVAQQQGAAPLSAGAYPLGTEFVHSVRYLDIADDGEVVM
APRMKELRYSRKTRWLTYFQHRELADDELKDAHDFPDRMEPVIGDIERGVGNRRGWRFSGFIEDDQGELRPQSYEELATC
AGCHGAVGALTDSTYTMERKLDASQGFQRGWYHWNQKSLGGIPEPQREDGRGEYAFYLEQVGGADEYRSNQEVRERFFDE
EGGLRPAMLTQLEGDISALVVPSARRALELNKAYLSVVEEQSYIRGRDAVLAPMVNVHKEVEAGQRTAITEPVTYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62215; Mature: 62215

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFFILGMSALVWQLSGCGQSDASQAENLGRLYLSNPAATIPPQCYTKTEDAKGVESN
CCEEEEEHHHHHHHHHHCCCCCCCHHHHHHCCEEEECCCCCCCCCHHCCCCCCCCCCCCC
PCYVCHTASKEPNFTNDLDLQLAYDFAGPATVNRWENLFVDRSEAREAISDEAILAYVRT
CEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEEEC
DNYQSGGAVQLAETLTGKLPAHWDGDGNGHWDGYVPDVSYRFDEHGFDLDAEGEPTGWRA
CCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEE
LAYTPFPGAFFPTNGSADDVLIRLDSPYQQNEKGEPDMRVYRLNLAIVESLIKRESVAIE
EEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHE
AVAEAEYGVDLNRNGVLDRATEVVFDWAPLEGREMEYVGLARVAQQQGAAPLSAGAYPLG
EEHHHHCCCCCCCCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
TEFVHSVRYLDIADDGEVVMAPRMKELRYSRKTRWLTYFQHRELADDELKDAHDFPDRME
HHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHH
PVIGDIERGVGNRRGWRFSGFIEDDQGELRPQSYEELATCAGCHGAVGALTDSTYTMERK
HHHHHHHHCCCCCCCEEEECEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCEEHHHH
LDASQGFQRGWYHWNQKSLGGIPEPQREDGRGEYAFYLEQVGGADEYRSNQEVRERFFDE
CCHHCCHHHCCEECCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCHHHCCCHHHHHHHCCC
EGGLRPAMLTQLEGDISALVVPSARRALELNKAYLSVVEEQSYIRGRDAVLAPMVNVHKE
CCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VEAGQRTAITEPVTYR
HHCCCCEECCCCCCCC
>Mature Secondary Structure
MKKIFFILGMSALVWQLSGCGQSDASQAENLGRLYLSNPAATIPPQCYTKTEDAKGVESN
CCEEEEEHHHHHHHHHHCCCCCCCHHHHHHCCEEEECCCCCCCCCHHCCCCCCCCCCCCC
PCYVCHTASKEPNFTNDLDLQLAYDFAGPATVNRWENLFVDRSEAREAISDEAILAYVRT
CEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEEEC
DNYQSGGAVQLAETLTGKLPAHWDGDGNGHWDGYVPDVSYRFDEHGFDLDAEGEPTGWRA
CCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEE
LAYTPFPGAFFPTNGSADDVLIRLDSPYQQNEKGEPDMRVYRLNLAIVESLIKRESVAIE
EEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHE
AVAEAEYGVDLNRNGVLDRATEVVFDWAPLEGREMEYVGLARVAQQQGAAPLSAGAYPLG
EEHHHHCCCCCCCCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
TEFVHSVRYLDIADDGEVVMAPRMKELRYSRKTRWLTYFQHRELADDELKDAHDFPDRME
HHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHH
PVIGDIERGVGNRRGWRFSGFIEDDQGELRPQSYEELATCAGCHGAVGALTDSTYTMERK
HHHHHHHHCCCCCCCEEEECEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCEEHHHH
LDASQGFQRGWYHWNQKSLGGIPEPQREDGRGEYAFYLEQVGGADEYRSNQEVRERFFDE
CCHHCCHHHCCEECCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCHHHCCCHHHHHHHCCC
EGGLRPAMLTQLEGDISALVVPSARRALELNKAYLSVVEEQSYIRGRDAVLAPMVNVHKE
CCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VEAGQRTAITEPVTYR
HHCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]