Click here to switch to the map view.

The map label for this gene is cyoC [H]

Identifier: 110834896

GI number: 110834896

Start: 2321830

End: 2322498

Strand: Reverse

Name: cyoC [H]

Synonym: ABO_2035

Alternate gene names: 110834896

Gene position: 2322498-2321830 (Counterclockwise)

Preceding gene: 110834897

Following gene: 110834895

Centisome position: 74.44

GC content: 54.41

Gene sequence:

>669_bases
TTGAAGCAGAACGTACACGGGTGCTTGCCAATGTCTGATAACACCATGACGGCTAACGCGAACAGCACGCACGATGGCCA
GCTGGAGTTTCTGGTAAAGGGGGATCATCACCCCCAGAACGGAACCTTGCTGGGTTTCTGGATCTACCTGATGAGCGACT
GTCTGATCTTCGCTTGTCTGTTTGCGACCTACGGGGTGCTCAGCCGCAGCTATGCGGGTGGGCCCACAGGCATGGAGCTG
TTTGACCTGAGCCTGATTGCCGTCAATACCTCATTGTTATTGGTATCGTCTATCACCTATGGCTTCGCCATGCTGCAGAT
GCAGGCAAACAGGGTGAAGGGCACCATGTTCTGGTTGGCCGTTACCGGCCTGCTGGGCTTGGGCTTTTTAAGCTTGGAAT
TGTATGAGTTCCATCATCTGATCCACGTGGGTGCCGGCCCGCAAACCAGTGGTTTCTGGACGGCCTTCTTTGCGTTGGTG
GGCACTCACGGTTTGCATGTGTTCTTCGGCATCGTGTGGCTGGTGACGCTGTTGTTCCAGCTGAAAAAACACGGCCTGAT
TCAGGAAAACAAGCGCCGGGTGTTCTGCCTGTCCATGTTCTGGCACTTCCTGGACGTGGTTTGGGTTGGCGTGTTCACTT
ACGTTTATCTGATGGGAGTGCTGCCATGA

Upstream 100 bases:

>100_bases
CTGGCTGGCGTATCTTTTGTGGCGCTGATCGGCACAGTGATCTATCACACCTTCAATTACGACCGGGAGTACTACATTCC
GGCGGAAGAAATAGAGCGGA

Downstream 100 bases:

>100_bases
GCGAGCATACACACGATCATGATCATAACGACGCGGACATTCCCCACGTTTCCTTGAAGGAATATGCCACCGGGTTTGTG
CTGGCGGTAATTCTTACGGT

Product: cytochrome o ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKQNVHGCLPMSDNTMTANANSTHDGQLEFLVKGDHHPQNGTLLGFWIYLMSDCLIFACLFATYGVLSRSYAGGPTGMEL
FDLSLIAVNTSLLLVSSITYGFAMLQMQANRVKGTMFWLAVTGLLGLGFLSLELYEFHHLIHVGAGPQTSGFWTAFFALV
GTHGLHVFFGIVWLVTLLFQLKKHGLIQENKRRVFCLSMFWHFLDVVWVGVFTYVYLMGVLP

Sequences:

>Translated_222_residues
MKQNVHGCLPMSDNTMTANANSTHDGQLEFLVKGDHHPQNGTLLGFWIYLMSDCLIFACLFATYGVLSRSYAGGPTGMEL
FDLSLIAVNTSLLLVSSITYGFAMLQMQANRVKGTMFWLAVTGLLGLGFLSLELYEFHHLIHVGAGPQTSGFWTAFFALV
GTHGLHVFFGIVWLVTLLFQLKKHGLIQENKRRVFCLSMFWHFLDVVWVGVFTYVYLMGVLP
>Mature_222_residues
MKQNVHGCLPMSDNTMTANANSTHDGQLEFLVKGDHHPQNGTLLGFWIYLMSDCLIFACLFATYGVLSRSYAGGPTGMEL
FDLSLIAVNTSLLLVSSITYGFAMLQMQANRVKGTMFWLAVTGLLGLGFLSLELYEFHHLIHVGAGPQTSGFWTAFFALV
GTHGLHVFFGIVWLVTLLFQLKKHGLIQENKRRVFCLSMFWHFLDVVWVGVFTYVYLMGVLP

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=212, Percent_Identity=52.3584905660377, Blast_Score=218, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 24824; Mature: 24824

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNVHGCLPMSDNTMTANANSTHDGQLEFLVKGDHHPQNGTLLGFWIYLMSDCLIFACL
CCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
FATYGVLSRSYAGGPTGMELFDLSLIAVNTSLLLVSSITYGFAMLQMQANRVKGTMFWLA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTGLLGLGFLSLELYEFHHLIHVGAGPQTSGFWTAFFALVGTHGLHVFFGIVWLVTLLFQ
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKKHGLIQENKRRVFCLSMFWHFLDVVWVGVFTYVYLMGVLP
HHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQNVHGCLPMSDNTMTANANSTHDGQLEFLVKGDHHPQNGTLLGFWIYLMSDCLIFACL
CCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
FATYGVLSRSYAGGPTGMELFDLSLIAVNTSLLLVSSITYGFAMLQMQANRVKGTMFWLA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTGLLGLGFLSLELYEFHHLIHVGAGPQTSGFWTAFFALVGTHGLHVFFGIVWLVTLLFQ
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKKHGLIQENKRRVFCLSMFWHFLDVVWVGVFTYVYLMGVLP
HHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]