Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834873

Identifier: 110834873

GI number: 110834873

Start: 2298206

End: 2299411

Strand: Direct

Name: 110834873

Synonym: ABO_2012

Alternate gene names: NA

Gene position: 2298206-2299411 (Clockwise)

Preceding gene: 110834872

Following gene: 110834874

Centisome position: 73.66

GC content: 56.47

Gene sequence:

>1206_bases
ATGGCCAGCCAATACAAAACCCGCTGCCCCCATTGTGCAGCCCAGTTCAAGATCACCGATGAACATTTGAAACAGGCGCG
CGGTGCGGTTCGGTGCGGCTCATGCTTGCAGATTTTTCAGGCCAGCGATTACCTGATCGATCCTGCCGACGCCCAGCAGC
AGCCCCAAAAAAATCGCTGGGCTGGCGCGCTGGACGGGTCCGACGTTGACAACAACCTGCCCAAAAATACTCAGACATTA
GCCGATGACGATGACGATGCCGAGAGCCTGAGCATTCACGGGATGGAGCTCAGTGACTCATTCATGAATGTAGATGTAGA
GGACACCGACCTCGGACTAGGCGAAGATTTCACCGACATGCAAGGCGCAGGCCGCGCCAACCACCATGAAAATGCGGATG
AATCCTGGGCCGAAGCCCTACTGCAAGAATTGGAAGAAGACGAGCCAGCTGCTGCCAATACCACGTATGGAGCCCCTCCA
TCACCCGGGACAGCCGCCAGCCACTCACCGTCACCAAAGCAGCAGACACCTAACGCTCCCAGCACAAAAACCAGCGAACA
GTCACCGTCTCTATCAGAAGACGACGATAACAGCCTATTTGTCGGGCTGGATCTGTTTGCTGATGACCATTATGAAAAAC
CAAGCTCCTCGGACAAACCGGTTCACGAACGCCACACTCATTTCCGCCAGCAGCGGGACTGGGGCGAGCTGATTAAATGG
ACGTCCCTCTCGGGGATCGCCTTAGTGACATTGATTGGCCAGTACACCTTCTTCAACTTCGACGATCTGGCTCGCAGCCC
ACAATGGCGCCCCTTGTACCAACAGGCCTGCGGGATACTTGGCTGCCAACTACCGAGTCGCTCCGACATCACCAAGGTGC
GCGGCACCAACCTAGTGGTTCGCAGCCACCCGAACTATGCCAATGCGCTGATTGTTGACGCCATCCTGTTTAATGAAGCC
AAGTACCCACAACCTTTCCCGGAACTGGAACTGAGCTTTAGCACCTTGAATGGCCGCCCTGTAGCCAGCCGCCGCTTTTT
CCCCAAGGAATACCTGCAAGGAGAGCTACACGGCATGGGCATCATGCCCACACGCACGCCATTGCATATTTCTTTGGAAA
TTGTGGATCCGGGCGAGCAGGCCGTGAGCTACAACCTTCGCCTGCTGCCGCCCCCCCAAGGCGGAGAACAGCTCTCCCAG
CGCTAG

Upstream 100 bases:

>100_bases
TAAATCATCTGCATGCGATGCTCGGATTGCTTCGTTGCCCGAACCCCAAAGCGTGCAACGTGCCACCTCTCTTCTTCCAA
TAACAATTCAGGCGAAAGCC

Downstream 100 bases:

>100_bases
CCGGCACCATCGCCAGCGCAAAATCGACAGCCCGTCGCCTGATGGCAGACGGGCCTTTCATCCCTAGCCTCCGATCTCTA
TCATTGTTCCCCCTCTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MASQYKTRCPHCAAQFKITDEHLKQARGAVRCGSCLQIFQASDYLIDPADAQQQPQKNRWAGALDGSDVDNNLPKNTQTL
ADDDDDAESLSIHGMELSDSFMNVDVEDTDLGLGEDFTDMQGAGRANHHENADESWAEALLQELEEDEPAAANTTYGAPP
SPGTAASHSPSPKQQTPNAPSTKTSEQSPSLSEDDDNSLFVGLDLFADDHYEKPSSSDKPVHERHTHFRQQRDWGELIKW
TSLSGIALVTLIGQYTFFNFDDLARSPQWRPLYQQACGILGCQLPSRSDITKVRGTNLVVRSHPNYANALIVDAILFNEA
KYPQPFPELELSFSTLNGRPVASRRFFPKEYLQGELHGMGIMPTRTPLHISLEIVDPGEQAVSYNLRLLPPPQGGEQLSQ
R

Sequences:

>Translated_401_residues
MASQYKTRCPHCAAQFKITDEHLKQARGAVRCGSCLQIFQASDYLIDPADAQQQPQKNRWAGALDGSDVDNNLPKNTQTL
ADDDDDAESLSIHGMELSDSFMNVDVEDTDLGLGEDFTDMQGAGRANHHENADESWAEALLQELEEDEPAAANTTYGAPP
SPGTAASHSPSPKQQTPNAPSTKTSEQSPSLSEDDDNSLFVGLDLFADDHYEKPSSSDKPVHERHTHFRQQRDWGELIKW
TSLSGIALVTLIGQYTFFNFDDLARSPQWRPLYQQACGILGCQLPSRSDITKVRGTNLVVRSHPNYANALIVDAILFNEA
KYPQPFPELELSFSTLNGRPVASRRFFPKEYLQGELHGMGIMPTRTPLHISLEIVDPGEQAVSYNLRLLPPPQGGEQLSQ
R
>Mature_400_residues
ASQYKTRCPHCAAQFKITDEHLKQARGAVRCGSCLQIFQASDYLIDPADAQQQPQKNRWAGALDGSDVDNNLPKNTQTLA
DDDDDAESLSIHGMELSDSFMNVDVEDTDLGLGEDFTDMQGAGRANHHENADESWAEALLQELEEDEPAAANTTYGAPPS
PGTAASHSPSPKQQTPNAPSTKTSEQSPSLSEDDDNSLFVGLDLFADDHYEKPSSSDKPVHERHTHFRQQRDWGELIKWT
SLSGIALVTLIGQYTFFNFDDLARSPQWRPLYQQACGILGCQLPSRSDITKVRGTNLVVRSHPNYANALIVDAILFNEAK
YPQPFPELELSFSTLNGRPVASRRFFPKEYLQGELHGMGIMPTRTPLHISLEIVDPGEQAVSYNLRLLPPPQGGEQLSQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44390; Mature: 44259

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQYKTRCPHCAAQFKITDEHLKQARGAVRCGSCLQIFQASDYLIDPADAQQQPQKNRW
CCCCCCCCCCCCHHEEEECHHHHHHHHCHHHHHHHHHHHHCCCCEECCCCCCCCCCHHCC
AGALDGSDVDNNLPKNTQTLADDDDDAESLSIHGMELSDSFMNVDVEDTDLGLGEDFTDM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEECCHHEECCCCCCCCCCCCCCHHH
QGAGRANHHENADESWAEALLQELEEDEPAAANTTYGAPPSPGTAASHSPSPKQQTPNAP
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
STKTSEQSPSLSEDDDNSLFVGLDLFADDHYEKPSSSDKPVHERHTHFRQQRDWGELIKW
CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH
TSLSGIALVTLIGQYTFFNFDDLARSPQWRPLYQQACGILGCQLPSRSDITKVRGTNLVV
CCCCHHHHHHHHHHHHEECHHHHHCCCCCCHHHHHHHHHEECCCCCCCCCCEECCCEEEE
RSHPNYANALIVDAILFNEAKYPQPFPELELSFSTLNGRPVASRRFFPKEYLQGELHGMG
ECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCHHHHCCHHCCCC
IMPTRTPLHISLEIVDPGEQAVSYNLRLLPPPQGGEQLSQR
CCCCCCCEEEEEEEECCCCHHEEECCEEECCCCCHHHHHCC
>Mature Secondary Structure 
ASQYKTRCPHCAAQFKITDEHLKQARGAVRCGSCLQIFQASDYLIDPADAQQQPQKNRW
CCCCCCCCCCCHHEEEECHHHHHHHHCHHHHHHHHHHHHCCCCEECCCCCCCCCCHHCC
AGALDGSDVDNNLPKNTQTLADDDDDAESLSIHGMELSDSFMNVDVEDTDLGLGEDFTDM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEECCHHEECCCCCCCCCCCCCCHHH
QGAGRANHHENADESWAEALLQELEEDEPAAANTTYGAPPSPGTAASHSPSPKQQTPNAP
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
STKTSEQSPSLSEDDDNSLFVGLDLFADDHYEKPSSSDKPVHERHTHFRQQRDWGELIKW
CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH
TSLSGIALVTLIGQYTFFNFDDLARSPQWRPLYQQACGILGCQLPSRSDITKVRGTNLVV
CCCCHHHHHHHHHHHHEECHHHHHCCCCCCHHHHHHHHHEECCCCCCCCCCEECCCEEEE
RSHPNYANALIVDAILFNEAKYPQPFPELELSFSTLNGRPVASRRFFPKEYLQGELHGMG
ECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCHHHHCCHHCCCC
IMPTRTPLHISLEIVDPGEQAVSYNLRLLPPPQGGEQLSQR
CCCCCCCEEEEEEEECCCCHHEEECCEEECCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA