Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is prmA [H]

Identifier: 110834872

GI number: 110834872

Start: 2297049

End: 2298035

Strand: Direct

Name: prmA [H]

Synonym: ABO_2011

Alternate gene names: 110834872

Gene position: 2297049-2298035 (Clockwise)

Preceding gene: 110834871

Following gene: 110834873

Centisome position: 73.62

GC content: 59.17

Gene sequence:

>987_bases
ATGGCCGCGCCCAGCGTTTGGGCGCGGCCTCTTGCGTTACAGACACTACAAAATTACCCCCTCGCACTTTTAACGGTTAA
CTCTCAACTAGAGCGAAGCGACAACATGGCCTGGCTTCAACTCCACCTTGCCACCACCGAACAGCACGCCGATGCCTTTC
AGGCTGCACTGGAAAACCTCGGTGCCGTGGCCGTGACCCTCACCGACGGTGCCGACCAACCTGTGTTCGAACCGCCGCCG
GGCACTCGCCCGCTATGGCAGAATACGGTGGTCAGCGCCCTGTTCGAGCAGAACCATACCCCGGAGCAGATTCTTAACGC
CCTCACAGCCCAAGGACTAGAAGCACAAGCCAGCCACCACGAAACCTTGGAAGATCAGGCCTGGGAGCGGGCCTGGATGG
ATGATTTTTCACCCATGCAATTCGGTGAACGGCTGTGGATCATTCCTAGCTGGAGCGAAGCCCCGGACCCAGCGGCGGTC
AACTTGAAGCTAGACCCAGGCCTAGCCTTCGGCACCGGCACCCATGAAACCACTGCCCTGTGCCTACAATGGCTGGATAG
CACCGACCTGCACAACAAAACCGTACTCGACTTCGGTTGTGGCTCTGGAGTACTGGCCATCGCCGCTCTGCTGCTGGGCG
CCGGCGATACCACCGGCACCGATATTGACCCTCAAGCGTTGATCGCCAGTCATGACAATGCCCACAACAATGGCGTAGCC
GAATCTCTAACCCTGTTCCTGCCCGAACAAATGCCCCAAGATTATCAGTGTGACATTCTGGTGGCCAACATACTCGCCGG
GCCGCTGGTTGAGCTCTCCGAGTTACTAGCCCGTTACTGCCGGGCCGGCGGCAAACTGGCCCTGTCTGGCATTCTTGCTG
AACAAGCAGATAGCGTACGCACTGCCTACGAGCCTTGGTTTGAACTCAACCCCACCACCCAACAAGGTGACTGGGTGCGC
ATCGACGGGGTACGGCGGGCCCGCTAA

Upstream 100 bases:

>100_bases
CGGCGTGGACATTCACCACCTAGAAAAGAAACTCGGGACACACTAAAAGCCGTTGATAGTGAATTGATCGCTATTATCGT
TAACGGTTACCATCCCCCTG

Downstream 100 bases:

>100_bases
AACCAGACTTTCAAAAGAAACTGAGTGACAAGTCCTTGCGGCTTGTCCTGCTTTTTCTGTAAAACATACCTAAATCATCT
GCATGCGATGCTCGGATTGC

Product: ribosomal protein L11 methyltransferase

Products: NA

Alternate protein names: L11 Mtase [H]

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MAAPSVWARPLALQTLQNYPLALLTVNSQLERSDNMAWLQLHLATTEQHADAFQAALENLGAVAVTLTDGADQPVFEPPP
GTRPLWQNTVVSALFEQNHTPEQILNALTAQGLEAQASHHETLEDQAWERAWMDDFSPMQFGERLWIIPSWSEAPDPAAV
NLKLDPGLAFGTGTHETTALCLQWLDSTDLHNKTVLDFGCGSGVLAIAALLLGAGDTTGTDIDPQALIASHDNAHNNGVA
ESLTLFLPEQMPQDYQCDILVANILAGPLVELSELLARYCRAGGKLALSGILAEQADSVRTAYEPWFELNPTTQQGDWVR
IDGVRRAR

Sequences:

>Translated_328_residues
MAAPSVWARPLALQTLQNYPLALLTVNSQLERSDNMAWLQLHLATTEQHADAFQAALENLGAVAVTLTDGADQPVFEPPP
GTRPLWQNTVVSALFEQNHTPEQILNALTAQGLEAQASHHETLEDQAWERAWMDDFSPMQFGERLWIIPSWSEAPDPAAV
NLKLDPGLAFGTGTHETTALCLQWLDSTDLHNKTVLDFGCGSGVLAIAALLLGAGDTTGTDIDPQALIASHDNAHNNGVA
ESLTLFLPEQMPQDYQCDILVANILAGPLVELSELLARYCRAGGKLALSGILAEQADSVRTAYEPWFELNPTTQQGDWVR
IDGVRRAR
>Mature_327_residues
AAPSVWARPLALQTLQNYPLALLTVNSQLERSDNMAWLQLHLATTEQHADAFQAALENLGAVAVTLTDGADQPVFEPPPG
TRPLWQNTVVSALFEQNHTPEQILNALTAQGLEAQASHHETLEDQAWERAWMDDFSPMQFGERLWIIPSWSEAPDPAAVN
LKLDPGLAFGTGTHETTALCLQWLDSTDLHNKTVLDFGCGSGVLAIAALLLGAGDTTGTDIDPQALIASHDNAHNNGVAE
SLTLFLPEQMPQDYQCDILVANILAGPLVELSELLARYCRAGGKLALSGILAEQADSVRTAYEPWFELNPTTQQGDWVRI
DGVRRAR

Specific function: Methylates ribosomal protein L11 [H]

COG id: COG2264

COG function: function code J; Ribosomal protein L11 methylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]

Homologues:

Organism=Escherichia coli, GI2367208, Length=292, Percent_Identity=54.1095890410959, Blast_Score=276, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010456
- InterPro:   IPR004498 [H]

Pfam domain/function: PF06325 PrmA [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 35687; Mature: 35556

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPSVWARPLALQTLQNYPLALLTVNSQLERSDNMAWLQLHLATTEQHADAFQAALENL
CCCCCHHHHHHHHHHHHCCCEEEEEECCHHHCCCCEEEEEEEEECCHHHHHHHHHHHHCC
GAVAVTLTDGADQPVFEPPPGTRPLWQNTVVSALFEQNHTPEQILNALTAQGLEAQASHH
CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH
ETLEDQAWERAWMDDFSPMQFGERLWIIPSWSEAPDPAAVNLKLDPGLAFGTGTHETTAL
HHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCEEEEEECCCEEECCCCCHHHHH
CLQWLDSTDLHNKTVLDFGCGSGVLAIAALLLGAGDTTGTDIDPQALIASHDNAHNNGVA
HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCCCCHH
ESLTLFLPEQMPQDYQCDILVANILAGPLVELSELLARYCRAGGKLALSGILAEQADSVR
HHHHEECHHHCCCCCCCCEEEHHHHHCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH
TAYEPWFELNPTTQQGDWVRIDGVRRAR
HHHCCCEECCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
AAPSVWARPLALQTLQNYPLALLTVNSQLERSDNMAWLQLHLATTEQHADAFQAALENL
CCCCHHHHHHHHHHHHCCCEEEEEECCHHHCCCCEEEEEEEEECCHHHHHHHHHHHHCC
GAVAVTLTDGADQPVFEPPPGTRPLWQNTVVSALFEQNHTPEQILNALTAQGLEAQASHH
CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH
ETLEDQAWERAWMDDFSPMQFGERLWIIPSWSEAPDPAAVNLKLDPGLAFGTGTHETTAL
HHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCEEEEEECCCEEECCCCCHHHHH
CLQWLDSTDLHNKTVLDFGCGSGVLAIAALLLGAGDTTGTDIDPQALIASHDNAHNNGVA
HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCCCCHH
ESLTLFLPEQMPQDYQCDILVANILAGPLVELSELLARYCRAGGKLALSGILAEQADSVR
HHHHEECHHHCCCCCCCCEEEHHHHHCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH
TAYEPWFELNPTTQQGDWVRIDGVRRAR
HHHCCCEECCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]

General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA