| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is prmA [H]
Identifier: 110834872
GI number: 110834872
Start: 2297049
End: 2298035
Strand: Direct
Name: prmA [H]
Synonym: ABO_2011
Alternate gene names: 110834872
Gene position: 2297049-2298035 (Clockwise)
Preceding gene: 110834871
Following gene: 110834873
Centisome position: 73.62
GC content: 59.17
Gene sequence:
>987_bases ATGGCCGCGCCCAGCGTTTGGGCGCGGCCTCTTGCGTTACAGACACTACAAAATTACCCCCTCGCACTTTTAACGGTTAA CTCTCAACTAGAGCGAAGCGACAACATGGCCTGGCTTCAACTCCACCTTGCCACCACCGAACAGCACGCCGATGCCTTTC AGGCTGCACTGGAAAACCTCGGTGCCGTGGCCGTGACCCTCACCGACGGTGCCGACCAACCTGTGTTCGAACCGCCGCCG GGCACTCGCCCGCTATGGCAGAATACGGTGGTCAGCGCCCTGTTCGAGCAGAACCATACCCCGGAGCAGATTCTTAACGC CCTCACAGCCCAAGGACTAGAAGCACAAGCCAGCCACCACGAAACCTTGGAAGATCAGGCCTGGGAGCGGGCCTGGATGG ATGATTTTTCACCCATGCAATTCGGTGAACGGCTGTGGATCATTCCTAGCTGGAGCGAAGCCCCGGACCCAGCGGCGGTC AACTTGAAGCTAGACCCAGGCCTAGCCTTCGGCACCGGCACCCATGAAACCACTGCCCTGTGCCTACAATGGCTGGATAG CACCGACCTGCACAACAAAACCGTACTCGACTTCGGTTGTGGCTCTGGAGTACTGGCCATCGCCGCTCTGCTGCTGGGCG CCGGCGATACCACCGGCACCGATATTGACCCTCAAGCGTTGATCGCCAGTCATGACAATGCCCACAACAATGGCGTAGCC GAATCTCTAACCCTGTTCCTGCCCGAACAAATGCCCCAAGATTATCAGTGTGACATTCTGGTGGCCAACATACTCGCCGG GCCGCTGGTTGAGCTCTCCGAGTTACTAGCCCGTTACTGCCGGGCCGGCGGCAAACTGGCCCTGTCTGGCATTCTTGCTG AACAAGCAGATAGCGTACGCACTGCCTACGAGCCTTGGTTTGAACTCAACCCCACCACCCAACAAGGTGACTGGGTGCGC ATCGACGGGGTACGGCGGGCCCGCTAA
Upstream 100 bases:
>100_bases CGGCGTGGACATTCACCACCTAGAAAAGAAACTCGGGACACACTAAAAGCCGTTGATAGTGAATTGATCGCTATTATCGT TAACGGTTACCATCCCCCTG
Downstream 100 bases:
>100_bases AACCAGACTTTCAAAAGAAACTGAGTGACAAGTCCTTGCGGCTTGTCCTGCTTTTTCTGTAAAACATACCTAAATCATCT GCATGCGATGCTCGGATTGC
Product: ribosomal protein L11 methyltransferase
Products: NA
Alternate protein names: L11 Mtase [H]
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MAAPSVWARPLALQTLQNYPLALLTVNSQLERSDNMAWLQLHLATTEQHADAFQAALENLGAVAVTLTDGADQPVFEPPP GTRPLWQNTVVSALFEQNHTPEQILNALTAQGLEAQASHHETLEDQAWERAWMDDFSPMQFGERLWIIPSWSEAPDPAAV NLKLDPGLAFGTGTHETTALCLQWLDSTDLHNKTVLDFGCGSGVLAIAALLLGAGDTTGTDIDPQALIASHDNAHNNGVA ESLTLFLPEQMPQDYQCDILVANILAGPLVELSELLARYCRAGGKLALSGILAEQADSVRTAYEPWFELNPTTQQGDWVR IDGVRRAR
Sequences:
>Translated_328_residues MAAPSVWARPLALQTLQNYPLALLTVNSQLERSDNMAWLQLHLATTEQHADAFQAALENLGAVAVTLTDGADQPVFEPPP GTRPLWQNTVVSALFEQNHTPEQILNALTAQGLEAQASHHETLEDQAWERAWMDDFSPMQFGERLWIIPSWSEAPDPAAV NLKLDPGLAFGTGTHETTALCLQWLDSTDLHNKTVLDFGCGSGVLAIAALLLGAGDTTGTDIDPQALIASHDNAHNNGVA ESLTLFLPEQMPQDYQCDILVANILAGPLVELSELLARYCRAGGKLALSGILAEQADSVRTAYEPWFELNPTTQQGDWVR IDGVRRAR >Mature_327_residues AAPSVWARPLALQTLQNYPLALLTVNSQLERSDNMAWLQLHLATTEQHADAFQAALENLGAVAVTLTDGADQPVFEPPPG TRPLWQNTVVSALFEQNHTPEQILNALTAQGLEAQASHHETLEDQAWERAWMDDFSPMQFGERLWIIPSWSEAPDPAAVN LKLDPGLAFGTGTHETTALCLQWLDSTDLHNKTVLDFGCGSGVLAIAALLLGAGDTTGTDIDPQALIASHDNAHNNGVAE SLTLFLPEQMPQDYQCDILVANILAGPLVELSELLARYCRAGGKLALSGILAEQADSVRTAYEPWFELNPTTQQGDWVRI DGVRRAR
Specific function: Methylates ribosomal protein L11 [H]
COG id: COG2264
COG function: function code J; Ribosomal protein L11 methylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]
Homologues:
Organism=Escherichia coli, GI2367208, Length=292, Percent_Identity=54.1095890410959, Blast_Score=276, Evalue=1e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010456 - InterPro: IPR004498 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 35687; Mature: 35556
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPSVWARPLALQTLQNYPLALLTVNSQLERSDNMAWLQLHLATTEQHADAFQAALENL CCCCCHHHHHHHHHHHHCCCEEEEEECCHHHCCCCEEEEEEEEECCHHHHHHHHHHHHCC GAVAVTLTDGADQPVFEPPPGTRPLWQNTVVSALFEQNHTPEQILNALTAQGLEAQASHH CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH ETLEDQAWERAWMDDFSPMQFGERLWIIPSWSEAPDPAAVNLKLDPGLAFGTGTHETTAL HHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCEEEEEECCCEEECCCCCHHHHH CLQWLDSTDLHNKTVLDFGCGSGVLAIAALLLGAGDTTGTDIDPQALIASHDNAHNNGVA HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCCCCHH ESLTLFLPEQMPQDYQCDILVANILAGPLVELSELLARYCRAGGKLALSGILAEQADSVR HHHHEECHHHCCCCCCCCEEEHHHHHCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH TAYEPWFELNPTTQQGDWVRIDGVRRAR HHHCCCEECCCCCCCCCEEEECCCCCCC >Mature Secondary Structure AAPSVWARPLALQTLQNYPLALLTVNSQLERSDNMAWLQLHLATTEQHADAFQAALENL CCCCHHHHHHHHHHHHCCCEEEEEECCHHHCCCCEEEEEEEEECCHHHHHHHHHHHHCC GAVAVTLTDGADQPVFEPPPGTRPLWQNTVVSALFEQNHTPEQILNALTAQGLEAQASHH CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH ETLEDQAWERAWMDDFSPMQFGERLWIIPSWSEAPDPAAVNLKLDPGLAFGTGTHETTAL HHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCCEEEEEECCCEEECCCCCHHHHH CLQWLDSTDLHNKTVLDFGCGSGVLAIAALLLGAGDTTGTDIDPQALIASHDNAHNNGVA HHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCCCCHH ESLTLFLPEQMPQDYQCDILVANILAGPLVELSELLARYCRAGGKLALSGILAEQADSVR HHHHEECHHHCCCCCCCCEEEHHHHHCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH TAYEPWFELNPTTQQGDWVRIDGVRRAR HHHCCCEECCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]
General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA