Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is 110834807

Identifier: 110834807

GI number: 110834807

Start: 2224720

End: 2225331

Strand: Reverse

Name: 110834807

Synonym: ABO_1946

Alternate gene names: NA

Gene position: 2225331-2224720 (Counterclockwise)

Preceding gene: 110834833

Following gene: 110834800

Centisome position: 71.32

GC content: 58.82

Gene sequence:

>612_bases
ATGATGCTGACGTACCTAGCGTTGCTGGTGTTGGTGGGCGCCAGCTTGCCGGCGGTGGTGCGCAGTTTTCTGCCGCCTTT
ACCGCGCCGGATTACCGGCATTACGCCCCAGGCTGTGGTGGTGTTGGGCGCGGGGCGGCGCCAACGAAAAGGCCGAAGTT
CGTTGAATACCCGAGGGCTGCGTCGGTTGAAATTGGCTGCAGAGCTGGCCCATGAGCACGGCTTGCCACTACTGGTCAGT
GGCGGCGGTCAGCCCCCTAAGCACGATGATGAGCCCACAGAGGCAGACTTAATGGCGGAGCAAGCGCTGCGGCGCTGGCC
GCGGCTGGATGTAATTAAAGAATTCCGTAGCCGAAATACTTGGGAGAACGCTTGTTATAGCTCTGAGCTGTTAGCTGATC
GAGGCATAGATGAGGTGTTGTTGGTCAGTGATCGGGCCCACTTGCCCAGGGCCTTGCTGTGTTTCCAGAGCCAGGGTGTG
TTGGCTCAGGCGGCGTGGAGCAAACGGTTGCCGAAGCAGGAATGGCTTCCCTCTGCGGGGGCCATATCTATGGTGCCGGA
GATTTGGTATGAGTGGTTGGCCCTAGTGTGGTATCACGCTCGATTTTTGTAA

Upstream 100 bases:

>100_bases
CTTGGATTTCTCAATACGCGGGTGCCCAGATGTGCAATCTCAATGATAAATACCTCGAGCAGGGGCGGCGGTGGGCCGTG
GCAGCCGTGAGGGCCTGCCA

Downstream 100 bases:

>100_bases
ACGCTAGGGTAAGAGGCGTGTCGCTTCTTGGTGCTATACGGCGTCAGGTGTCTTGGTGGCTCCGCCGAGCGCTTCAATGG
CCTGATATTGGCTGAGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MMLTYLALLVLVGASLPAVVRSFLPPLPRRITGITPQAVVVLGAGRRQRKGRSSLNTRGLRRLKLAAELAHEHGLPLLVS
GGGQPPKHDDEPTEADLMAEQALRRWPRLDVIKEFRSRNTWENACYSSELLADRGIDEVLLVSDRAHLPRALLCFQSQGV
LAQAAWSKRLPKQEWLPSAGAISMVPEIWYEWLALVWYHARFL

Sequences:

>Translated_203_residues
MMLTYLALLVLVGASLPAVVRSFLPPLPRRITGITPQAVVVLGAGRRQRKGRSSLNTRGLRRLKLAAELAHEHGLPLLVS
GGGQPPKHDDEPTEADLMAEQALRRWPRLDVIKEFRSRNTWENACYSSELLADRGIDEVLLVSDRAHLPRALLCFQSQGV
LAQAAWSKRLPKQEWLPSAGAISMVPEIWYEWLALVWYHARFL
>Mature_203_residues
MMLTYLALLVLVGASLPAVVRSFLPPLPRRITGITPQAVVVLGAGRRQRKGRSSLNTRGLRRLKLAAELAHEHGLPLLVS
GGGQPPKHDDEPTEADLMAEQALRRWPRLDVIKEFRSRNTWENACYSSELLADRGIDEVLLVSDRAHLPRALLCFQSQGV
LAQAAWSKRLPKQEWLPSAGAISMVPEIWYEWLALVWYHARFL

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 22800; Mature: 22800

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLTYLALLVLVGASLPAVVRSFLPPLPRRITGITPQAVVVLGAGRRQRKGRSSLNTRGL
CHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHCCCCHHHEEEECCCCHHHCCHHHHHHHHH
RRLKLAAELAHEHGLPLLVSGGGQPPKHDDEPTEADLMAEQALRRWPRLDVIKEFRSRNT
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCC
WENACYSSELLADRGIDEVLLVSDRAHLPRALLCFQSQGVLAQAAWSKRLPKQEWLPSAG
HHHHHHHHHHHHHCCCCCEEEECCCHHCHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCC
AISMVPEIWYEWLALVWYHARFL
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMLTYLALLVLVGASLPAVVRSFLPPLPRRITGITPQAVVVLGAGRRQRKGRSSLNTRGL
CHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHCCCCHHHEEEECCCCHHHCCHHHHHHHHH
RRLKLAAELAHEHGLPLLVSGGGQPPKHDDEPTEADLMAEQALRRWPRLDVIKEFRSRNT
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCC
WENACYSSELLADRGIDEVLLVSDRAHLPRALLCFQSQGVLAQAAWSKRLPKQEWLPSAG
HHHHHHHHHHHHHCCCCCEEEECCCHHCHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCC
AISMVPEIWYEWLALVWYHARFL
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]