Click here to switch to the map view.

The map label for this gene is ubiX [C]

Identifier: 110834833

GI number: 110834833

Start: 2250458

End: 2251060

Strand: Reverse

Name: ubiX [C]

Synonym: ABO_1972

Alternate gene names: 110834833

Gene position: 2251060-2250458 (Counterclockwise)

Preceding gene: 110834834

Following gene: 110834807

Centisome position: 72.15

GC content: 56.55

Gene sequence:

>603_bases
ATGACACATCGGGTGACGTTAGCTTTTACCGGTGCCTCCGGAGCACCTTACGGGTTACGTTTGCTGCAGTGTTTGCTGGA
GGCGGACTGTGAGGTGTTCGTTCTACTTTCCAAGGCTGCGCGAGTGGTCATTGGCACTGAGACGGCATTGAAATTGCCTG
CGGGTACCGGCAACGCTGAGCAGGCGTTGCGCGATTGGGTAAAGACAGAAAAGGGACAGCTGGTCGTTTGTGGGTTGGAA
CAATGGACGGCGCCGGTGGCTTCCGGCAGCGGAGCTCCTGCAGCCATGGTGGTCTGCCCCTGCTCTACGGGGACCTTGTC
AGCCATTGCGATGGGGGCCAGTGATAATCTGATCGAGCGGGCTGCGGATGTGGCCATAAAGGAAGGTCGAAAATTGATTC
TGGTCCCCCGGGAATCGCCTTTCTCCGCGATCCACCTGGAAAACATGCTTAAACTTTCCCGCCTTGGCGTCACCATCATG
CCCGCCGCGCCTGGGTTTTATCATCAACCACAAAGCGTGGATGATCTGGTGGACTTTATGGTTGCCCGGCTACTGGATCA
TCTTGGTGTGGAACAAACCTTAGTGAAGCGTTGGGGGGAGTGA

Upstream 100 bases:

>100_bases
TGCAACGCAACCTGCGTGGCGTGCTGGTGGCAGAAATTCATTTGGTTATATTGATGCCGATTCTGGCAGTGATGATGGCC
AGAGGTGTCGGGATGGGTTT

Downstream 100 bases:

>100_bases
GTTGAACGTTAAAACGCGTGCTAGGCGTTAATGTTTAGTTGATGGTAGCTGCTGTCGCGTTTCAACTTTAGGCTTACTGC
ACTAGGAGGTGGCCAACTAG

Product: aromatic acid decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTHRVTLAFTGASGAPYGLRLLQCLLEADCEVFVLLSKAARVVIGTETALKLPAGTGNAEQALRDWVKTEKGQLVVCGLE
QWTAPVASGSGAPAAMVVCPCSTGTLSAIAMGASDNLIERAADVAIKEGRKLILVPRESPFSAIHLENMLKLSRLGVTIM
PAAPGFYHQPQSVDDLVDFMVARLLDHLGVEQTLVKRWGE

Sequences:

>Translated_200_residues
MTHRVTLAFTGASGAPYGLRLLQCLLEADCEVFVLLSKAARVVIGTETALKLPAGTGNAEQALRDWVKTEKGQLVVCGLE
QWTAPVASGSGAPAAMVVCPCSTGTLSAIAMGASDNLIERAADVAIKEGRKLILVPRESPFSAIHLENMLKLSRLGVTIM
PAAPGFYHQPQSVDDLVDFMVARLLDHLGVEQTLVKRWGE
>Mature_199_residues
THRVTLAFTGASGAPYGLRLLQCLLEADCEVFVLLSKAARVVIGTETALKLPAGTGNAEQALRDWVKTEKGQLVVCGLEQ
WTAPVASGSGAPAAMVVCPCSTGTLSAIAMGASDNLIERAADVAIKEGRKLILVPRESPFSAIHLENMLKLSRLGVTIMP
AAPGFYHQPQSVDDLVDFMVARLLDHLGVEQTLVKRWGE

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=198, Percent_Identity=39.3939393939394, Blast_Score=132, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6320746, Length=197, Percent_Identity=40.6091370558376, Blast_Score=143, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 21294; Mature: 21163

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHRVTLAFTGASGAPYGLRLLQCLLEADCEVFVLLSKAARVVIGTETALKLPAGTGNAE
CCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHCCEEEEECCCEEEECCCCCCHH
QALRDWVKTEKGQLVVCGLEQWTAPVASGSGAPAAMVVCPCSTGTLSAIAMGASDNLIER
HHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHH
AADVAIKEGRKLILVPRESPFSAIHLENMLKLSRLGVTIMPAAPGFYHQPQSVDDLVDFM
HHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHH
VARLLDHLGVEQTLVKRWGE
HHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure 
THRVTLAFTGASGAPYGLRLLQCLLEADCEVFVLLSKAARVVIGTETALKLPAGTGNAE
CEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHCCEEEEECCCEEEECCCCCCHH
QALRDWVKTEKGQLVVCGLEQWTAPVASGSGAPAAMVVCPCSTGTLSAIAMGASDNLIER
HHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHH
AADVAIKEGRKLILVPRESPFSAIHLENMLKLSRLGVTIMPAAPGFYHQPQSVDDLVDFM
HHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHH
VARLLDHLGVEQTLVKRWGE
HHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]