Click here to switch to the map view.

The map label for this gene is 110834800

Identifier: 110834800

GI number: 110834800

Start: 2215347

End: 2216723

Strand: Reverse

Name: 110834800

Synonym: ABO_1939

Alternate gene names: NA

Gene position: 2216723-2215347 (Counterclockwise)

Preceding gene: 110834807

Following gene: 110834794

Centisome position: 71.05

GC content: 59.69

Gene sequence:

>1377_bases
GTGAAACACCCATGCAAGTACCATCCGGGAACGGAGGCGCTGTGGTATTGCGCCCATGATGGATTGTATCTGTGTCAGCA
ATGTGTGGATGGGGATGAGGACCACCGCATGGAGGCTCGTTGCTTACTGTGCAACCATGATCTGTTGCCGGCGGTACAGA
GCCAGGTGGGGCCGTTGTGGCAGCGTCTTGGCCGTTATCTGCGCCTGCCGTTCTCGTTACCGCTGCTGCCGCTGTTGGCC
ATTTGGCCGGTGCTAGCCACGTTGTTGCCCCCGCTATGGGCAATGGTACCGGTGGCATTGGTGGCGGGGTTGCCCACTTT
CGTTTTTTCAGCGGCGTTGATGACGTTGCGCGCTGGCCCTCGCAAAAGCCGCAAGGCGGCCTTTCCCGGTTGGGATTGTC
TTGCAGAGAGCGCTTCCTGGAAAAGTGCCCTGTGGCAGGCCTTGCCCGCATCGCTGGTGATTGGCCTTGCCGCACTTTTG
ATGGTGGCGGTATCGGTGCCGGTGGGTTTGTTGGTCGCGGTGATTGGCATGCTGCTGGTGCCTGCCCTGTGGCTGGCGGT
GTTGGTGCAAGGTGCAGAGCCCGGCGCCTATGCGGCGGTGGGCAACTATATCGTGTCTGCCCCTCGGGATTACGCCGTGG
CAGCGGGGTTTGCTTCGTTGGGCTGTGTGTCGGTAGTGGCGCTGGTGGGGGTGGCCGTGGATGTATTGCCGTTGCCTTTG
GTACAGGGGGTAGCCGGTTTGCTGGCGGCTTGGTGGTGGTTGGTTTTGGCGGAAATGTGTGGCGATATTGCGGCCCGGCA
CGGCCGGCTGTGGGGCCTGAATCAGGGGGGGCGGCGTGTCACTCTGCCATTGGCTGAGCGTCGGCAGCGCGCTCAATTGT
GTGCTGGTCGGTTCGATAAGGTGTTGCTGACTACCTCAAAAATCATCAAAACCAAGAAAGCCACGGTGGTGGATTGGCAG
CATCATGATCGGTTGTTGGCGGTGCTGGGTAAGGAGGATGAACGAATTGCCCTGGCAGAATCTTATCTAAATTGTTTGGT
TGGCGCTCAGGCCTGGAGTGTTGCTCTGGAACTGGTTGCTCGGCAACGCCACCGTGATTCACAGTGGTTGCCCACTGCGC
CGGCGCTACGGTTGGCGTTGGCTGAGGGCGTTTATCCCCGTGACCCTAAGCTGGCGGTTGCCTTACTCAAGGAGCTCCAC
CAGAAATACCCTGAGTTTGCCGACCTTGGTGAAGCTTACCTGTTGCTGGCCAAGGTGCTGGCGGAGGCGTTTGGCCTGAG
TGGCAAGGCTGAACAATATCTGCGTTATGTGGAAAGCCACTGCCGTGATGTTCGGTTACGCCAGAAGGTTGCGGACTGTC
GGCTAGCCTGGGGGTGA

Upstream 100 bases:

>100_bases
GGCTACCGGTCATGGGGAGGAATCTCCTGCGCGTTTGCACTTTGAACATTCAACTCGACCCTGCCCCCTAAGCCGGGATG
ACAAGTCTGGGGGCATCATA

Downstream 100 bases:

>100_bases
CGGGTGTGTTTCCGATTTCCAAAGGTGTCGAGTGTCGAGTGTCGAGTGTTGGGCAAGAGGCGCCAGGTGTTAAGTCGTCA
CGCCAGCGTTTTTGCCCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MKHPCKYHPGTEALWYCAHDGLYLCQQCVDGDEDHRMEARCLLCNHDLLPAVQSQVGPLWQRLGRYLRLPFSLPLLPLLA
IWPVLATLLPPLWAMVPVALVAGLPTFVFSAALMTLRAGPRKSRKAAFPGWDCLAESASWKSALWQALPASLVIGLAALL
MVAVSVPVGLLVAVIGMLLVPALWLAVLVQGAEPGAYAAVGNYIVSAPRDYAVAAGFASLGCVSVVALVGVAVDVLPLPL
VQGVAGLLAAWWWLVLAEMCGDIAARHGRLWGLNQGGRRVTLPLAERRQRAQLCAGRFDKVLLTTSKIIKTKKATVVDWQ
HHDRLLAVLGKEDERIALAESYLNCLVGAQAWSVALELVARQRHRDSQWLPTAPALRLALAEGVYPRDPKLAVALLKELH
QKYPEFADLGEAYLLLAKVLAEAFGLSGKAEQYLRYVESHCRDVRLRQKVADCRLAWG

Sequences:

>Translated_458_residues
MKHPCKYHPGTEALWYCAHDGLYLCQQCVDGDEDHRMEARCLLCNHDLLPAVQSQVGPLWQRLGRYLRLPFSLPLLPLLA
IWPVLATLLPPLWAMVPVALVAGLPTFVFSAALMTLRAGPRKSRKAAFPGWDCLAESASWKSALWQALPASLVIGLAALL
MVAVSVPVGLLVAVIGMLLVPALWLAVLVQGAEPGAYAAVGNYIVSAPRDYAVAAGFASLGCVSVVALVGVAVDVLPLPL
VQGVAGLLAAWWWLVLAEMCGDIAARHGRLWGLNQGGRRVTLPLAERRQRAQLCAGRFDKVLLTTSKIIKTKKATVVDWQ
HHDRLLAVLGKEDERIALAESYLNCLVGAQAWSVALELVARQRHRDSQWLPTAPALRLALAEGVYPRDPKLAVALLKELH
QKYPEFADLGEAYLLLAKVLAEAFGLSGKAEQYLRYVESHCRDVRLRQKVADCRLAWG
>Mature_458_residues
MKHPCKYHPGTEALWYCAHDGLYLCQQCVDGDEDHRMEARCLLCNHDLLPAVQSQVGPLWQRLGRYLRLPFSLPLLPLLA
IWPVLATLLPPLWAMVPVALVAGLPTFVFSAALMTLRAGPRKSRKAAFPGWDCLAESASWKSALWQALPASLVIGLAALL
MVAVSVPVGLLVAVIGMLLVPALWLAVLVQGAEPGAYAAVGNYIVSAPRDYAVAAGFASLGCVSVVALVGVAVDVLPLPL
VQGVAGLLAAWWWLVLAEMCGDIAARHGRLWGLNQGGRRVTLPLAERRQRAQLCAGRFDKVLLTTSKIIKTKKATVVDWQ
HHDRLLAVLGKEDERIALAESYLNCLVGAQAWSVALELVARQRHRDSQWLPTAPALRLALAEGVYPRDPKLAVALLKELH
QKYPEFADLGEAYLLLAKVLAEAFGLSGKAEQYLRYVESHCRDVRLRQKVADCRLAWG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50026; Mature: 50026

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS50119 ZF_BBOX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA