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The map label for this gene is sufB [C]

Identifier: 110834726

GI number: 110834726

Start: 2140725

End: 2142164

Strand: Direct

Name: sufB [C]

Synonym: ABO_1865

Alternate gene names: 110834726

Gene position: 2140725-2142164 (Clockwise)

Preceding gene: 110834713

Following gene: 110834727

Centisome position: 68.61

GC content: 56.6

Gene sequence:

>1440_bases
ATGAGCCAAGCCGAACTGGACAAGCTGATTCGCTCCAATTACGAGGCCGGTTTTACCACCACGGTGGACACCGAGACCCT
GCCCCCTGGGCTGAGCGAGGAAGTCATCCGTTTTCTGTCCGCCAAAAAAGGCGAACCGGAATGGATGCTTGAGTGGCGCC
TAGACAGCTACCGCAAGTGGCAGGAGATGCCCACACCGGGCTGGGCGCATCTGCACCACCCGCCCATCGACTTTAACGAG
GTGTCTTACTACTCCAAGCCCAAAAGCTTGGACGACGCCCCCAAAAGCCTAGATGAAGTGGACCCAGAGCTACTCGCCAC
CTATGAAAAACTGGGCATCCCCCTGCACGAACAGGAAATGCTGGCCGGTGTCGCTGTAGACGTAGTGTTCGATTCCTCCT
CGGTATTCACCACCTTCAAAGAGAAGCTGTGGGAAGCCGGAGTAATTTTCTGCTCTATTTCCGAAGCCATTCAGGAATAC
CCGGAGCTGGTGCAGAAATACATGGGCTCCGTGGTACCCAAAGGCGACAACTTCTATGCCGCCTTGAACAGTGCAGTGTT
CTCTGACGGCTCCTTCGTCTACATCCCCAAGGGCGTACGCTGCCCCATGGAGCTGTCCACCTATTTCCGCATCAACGAAG
CCAACACCGGCCAGTTCGAGCGCACCCTGATCATTGCCGACGAAGGCAGCTACGTGAGCTACCTGGAAGGCTGCACCGCA
CCTCAGCGCGACGAAAACCAGCTGCACGCGGCGGTGGTTGAACTGGTTGCTCTACCCGGCGCCGAGATCAAGTACTCCAC
CGTACAGAATTGGTACCCCGGTGATGAGAACGGCAAAGGCGGCATTTATAACTTCGTGACCAAGCGCGGTATTGCCCACG
ACAACAGCAAAATTAGCTGGACCCAGGTAGAAACGGGCTCCGCTATCACGTGGAAGTATCCGTCCGTGATCTTGCGTGGC
GACAACAGCATCGGTGAGTTTTACTCCGTAGCGCTGACCCGCCACATGCAACAAGCAGACACCGGCACCAAGATGATCCA
CTTGGGCAAGAACACCAAGAGCACCATTATTTCCAAGGGCATCTCCGCCGGACGCAGTAGCAACAGCTACCGTGGCTTAG
TGCGCATCAGCCCGCGGGCAGAAAACGCCCGTAACTTCACCCAGTGCGACTCACTGTTGCTCGGTGACACCTGCGGTGCA
CACACTTTCCCGTACATCGAGTCGAAAAACCCCACGGCCACCATCGAACACGAGGCCACCACCTCCAAGGTGAGTGACGA
CCAAATGTTCCTGTGCCGGCAACGCGGCATCGACCCGGAAAAGGCGGTTTCCATGATTGTGAACGGCTTCTGTAAAGAGG
TGTTCAAGGAGCTGCCCATGGAATTTGCCGTGGAAGCGGGTAAGTTGCTGGAAGTTAGCCTAGAAGGCGCAGTGGGCTAA

Upstream 100 bases:

>100_bases
GGGCGCCCGTTTTCTTACCGCCCCCTCATTCGACAGCGCCCTGTAAAGGCGTATAATACCCGACTAAATTACTCTGGTAT
TCAACTGCAGGCCCTGATCT

Downstream 100 bases:

>100_bases
GCCCTCACCCTGAAAATGACTGTGTGGGAATTTGCCCGCAAGCGATTCACCCTTTACCAATCATGGATCGCGAGCAGGCC
GGCGCCCACCGCAAACCGAA

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MSQAELDKLIRSNYEAGFTTTVDTETLPPGLSEEVIRFLSAKKGEPEWMLEWRLDSYRKWQEMPTPGWAHLHHPPIDFNE
VSYYSKPKSLDDAPKSLDEVDPELLATYEKLGIPLHEQEMLAGVAVDVVFDSSSVFTTFKEKLWEAGVIFCSISEAIQEY
PELVQKYMGSVVPKGDNFYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEANTGQFERTLIIADEGSYVSYLEGCTA
PQRDENQLHAAVVELVALPGAEIKYSTVQNWYPGDENGKGGIYNFVTKRGIAHDNSKISWTQVETGSAITWKYPSVILRG
DNSIGEFYSVALTRHMQQADTGTKMIHLGKNTKSTIISKGISAGRSSNSYRGLVRISPRAENARNFTQCDSLLLGDTCGA
HTFPYIESKNPTATIEHEATTSKVSDDQMFLCRQRGIDPEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEVSLEGAVG

Sequences:

>Translated_479_residues
MSQAELDKLIRSNYEAGFTTTVDTETLPPGLSEEVIRFLSAKKGEPEWMLEWRLDSYRKWQEMPTPGWAHLHHPPIDFNE
VSYYSKPKSLDDAPKSLDEVDPELLATYEKLGIPLHEQEMLAGVAVDVVFDSSSVFTTFKEKLWEAGVIFCSISEAIQEY
PELVQKYMGSVVPKGDNFYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEANTGQFERTLIIADEGSYVSYLEGCTA
PQRDENQLHAAVVELVALPGAEIKYSTVQNWYPGDENGKGGIYNFVTKRGIAHDNSKISWTQVETGSAITWKYPSVILRG
DNSIGEFYSVALTRHMQQADTGTKMIHLGKNTKSTIISKGISAGRSSNSYRGLVRISPRAENARNFTQCDSLLLGDTCGA
HTFPYIESKNPTATIEHEATTSKVSDDQMFLCRQRGIDPEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEVSLEGAVG
>Mature_478_residues
SQAELDKLIRSNYEAGFTTTVDTETLPPGLSEEVIRFLSAKKGEPEWMLEWRLDSYRKWQEMPTPGWAHLHHPPIDFNEV
SYYSKPKSLDDAPKSLDEVDPELLATYEKLGIPLHEQEMLAGVAVDVVFDSSSVFTTFKEKLWEAGVIFCSISEAIQEYP
ELVQKYMGSVVPKGDNFYAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEANTGQFERTLIIADEGSYVSYLEGCTAP
QRDENQLHAAVVELVALPGAEIKYSTVQNWYPGDENGKGGIYNFVTKRGIAHDNSKISWTQVETGSAITWKYPSVILRGD
NSIGEFYSVALTRHMQQADTGTKMIHLGKNTKSTIISKGISAGRSSNSYRGLVRISPRAENARNFTQCDSLLLGDTCGAH
TFPYIESKNPTATIEHEATTSKVSDDQMFLCRQRGIDPEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEVSLEGAVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=480, Percent_Identity=63.75, Blast_Score=638, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53283; Mature: 53151

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAELDKLIRSNYEAGFTTTVDTETLPPGLSEEVIRFLSAKKGEPEWMLEWRLDSYRKW
CCHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
QEMPTPGWAHLHHPPIDFNEVSYYSKPKSLDDAPKSLDEVDPELLATYEKLGIPLHEQEM
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCHHHH
LAGVAVDVVFDSSSVFTTFKEKLWEAGVIFCSISEAIQEYPELVQKYMGSVVPKGDNFYA
HHHEEEEEEECCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEANTGQFERTLIIADEGSYVSYLEGCTA
HHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCHHHHHHCCCC
PQRDENQLHAAVVELVALPGAEIKYSTVQNWYPGDENGKGGIYNFVTKRGIAHDNSKISW
CCCCHHHHHHHHHHHHHCCCCCEEECHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEE
TQVETGSAITWKYPSVILRGDNSIGEFYSVALTRHMQQADTGTKMIHLGKNTKSTIISKG
EEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
ISAGRSSNSYRGLVRISPRAENARNFTQCDSLLLGDTCGAHTFPYIESKNPTATIEHEAT
HHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCEEEECCCC
TSKVSDDQMFLCRQRGIDPEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEVSLEGAVG
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEECCCCC
>Mature Secondary Structure 
SQAELDKLIRSNYEAGFTTTVDTETLPPGLSEEVIRFLSAKKGEPEWMLEWRLDSYRKW
CHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
QEMPTPGWAHLHHPPIDFNEVSYYSKPKSLDDAPKSLDEVDPELLATYEKLGIPLHEQEM
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCHHHH
LAGVAVDVVFDSSSVFTTFKEKLWEAGVIFCSISEAIQEYPELVQKYMGSVVPKGDNFYA
HHHEEEEEEECCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ALNSAVFSDGSFVYIPKGVRCPMELSTYFRINEANTGQFERTLIIADEGSYVSYLEGCTA
HHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCHHHHHHCCCC
PQRDENQLHAAVVELVALPGAEIKYSTVQNWYPGDENGKGGIYNFVTKRGIAHDNSKISW
CCCCHHHHHHHHHHHHHCCCCCEEECHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEE
TQVETGSAITWKYPSVILRGDNSIGEFYSVALTRHMQQADTGTKMIHLGKNTKSTIISKG
EEEECCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
ISAGRSSNSYRGLVRISPRAENARNFTQCDSLLLGDTCGAHTFPYIESKNPTATIEHEAT
HHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCEEEECCCC
TSKVSDDQMFLCRQRGIDPEKAVSMIVNGFCKEVFKELPMEFAVEAGKLLEVSLEGAVG
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]