| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834560
Identifier: 110834560
GI number: 110834560
Start: 1933514
End: 1933966
Strand: Direct
Name: 110834560
Synonym: ABO_1699
Alternate gene names: NA
Gene position: 1933514-1933966 (Clockwise)
Preceding gene: 110834559
Following gene: 110834561
Centisome position: 61.97
GC content: 54.75
Gene sequence:
>453_bases GTGCGCACACGTCAGGAAAAAAATATCCGTCGTGCCAAAGCCCTGTCCTACTCTGGACTTATCCCCTTTTATGGCATGGC TGGGCTATCTTGGTTTGCCCAAACCGGCAGCTGGGCACTGCATGCTCTGGCCACCTACTCCGCCATTGTACTGGCCTTTC TCGGCGCCATTCATTGGGGCAGGGCGCTCGATAAAATGCCCTACAGCAACCAGTACCCAACACTACTATTTGGTCTGATA CCGGCGTTATTGGCATGGCTTTCCCTGCTACTTCCGTTGGAACTATCGCTGCCCATGCTCGCCGCCGGGCTTATGTTCGT GTGGGGCACAGAACAGATGGTATTCAATGACACACTCCCCACTTGGTATCGACACCTAAGGCATCAACTCACCGCCGCCG CCGTTATCGCCGTCCTGATCGGTTGGGCTGCCACTATGTTCTGGATGCTATAA
Upstream 100 bases:
>100_bases GCCACCTGAAAGCCCAACCCTGGGTTGGCTACCCCTCCTTGCCTTAACCTTCACTCTGCATCATCGATAATAGAAAAAAA CATCCGTTGGAATCGACACT
Downstream 100 bases:
>100_bases AGGGCGCATTGCTTCTAACCGCCAATTTTCGGCTTTTTACAAAACAACAGATGCTGATAGGGGGCCAGCCATGGCCGGCT CTGTCCGCCCCCGCTACACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MRTRQEKNIRRAKALSYSGLIPFYGMAGLSWFAQTGSWALHALATYSAIVLAFLGAIHWGRALDKMPYSNQYPTLLFGLI PALLAWLSLLLPLELSLPMLAAGLMFVWGTEQMVFNDTLPTWYRHLRHQLTAAAVIAVLIGWAATMFWML
Sequences:
>Translated_150_residues MRTRQEKNIRRAKALSYSGLIPFYGMAGLSWFAQTGSWALHALATYSAIVLAFLGAIHWGRALDKMPYSNQYPTLLFGLI PALLAWLSLLLPLELSLPMLAAGLMFVWGTEQMVFNDTLPTWYRHLRHQLTAAAVIAVLIGWAATMFWML >Mature_150_residues MRTRQEKNIRRAKALSYSGLIPFYGMAGLSWFAQTGSWALHALATYSAIVLAFLGAIHWGRALDKMPYSNQYPTLLFGLI PALLAWLSLLLPLELSLPMLAAGLMFVWGTEQMVFNDTLPTWYRHLRHQLTAAAVIAVLIGWAATMFWML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16886; Mature: 16886
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRQEKNIRRAKALSYSGLIPFYGMAGLSWFAQTGSWALHALATYSAIVLAFLGAIHWG CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RALDKMPYSNQYPTLLFGLIPALLAWLSLLLPLELSLPMLAAGLMFVWGTEQMVFNDTLP HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCCCH TWYRHLRHQLTAAAVIAVLIGWAATMFWML HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRTRQEKNIRRAKALSYSGLIPFYGMAGLSWFAQTGSWALHALATYSAIVLAFLGAIHWG CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RALDKMPYSNQYPTLLFGLIPALLAWLSLLLPLELSLPMLAAGLMFVWGTEQMVFNDTLP HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCCCH TWYRHLRHQLTAAAVIAVLIGWAATMFWML HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA