| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834559
Identifier: 110834559
GI number: 110834559
Start: 1932957
End: 1933460
Strand: Direct
Name: 110834559
Synonym: ABO_1698
Alternate gene names: NA
Gene position: 1932957-1933460 (Clockwise)
Preceding gene: 110834556
Following gene: 110834560
Centisome position: 61.95
GC content: 59.33
Gene sequence:
>504_bases ATGACCAAGACAGCCGATAATCTGCAACGTCACGCCAACTTTTCACGCTGTGGACAGTACCGCTATGCGCTCTGGCGCCA GTGGGGGGAAGGTGATGATTTTATGCTGCTGATTGGCCTCAACCCCTCCACCACTGATCCCCACCAAGACAACCCCACCA TTCGTCGCTGCATGGGCTTTGCCCAGGACTGGGGCTACTCAGGACTGTGCGTGGCCAACCTGTTTGCATATCGGGCAACT TACCCAAAGGATCTATTTTCTGCCGCAGACCCCGTGGGCCCACAAAATGACGCCTGGCTACGCCGCTTGGCCCGTCAGGC CGACCTAGTCGTGGCGGCTTGGGGCAACCATGGACGCTTTAACGACCGCGCCGTGCAGGTGGTCCGCCAATTGCCAACCA TGCATTACATTCGCCTTAATCGCTCCGGGGAGCCGGCACACCCGCTATACCTCCCCCGCCACCTGAAAGCCCAACCCTGG GTTGGCTACCCCTCCTTGCCTTAA
Upstream 100 bases:
>100_bases TACACTATGGCGCCGGGCCATCACATCTTTAAATTCCATACTCTTAGCCTGTTTAAGTGCCCTTAGCCTTCACTGTGCCA GAGATTTATAATACGCAGCC
Downstream 100 bases:
>100_bases CCTTCACTCTGCATCATCGATAATAGAAAAAAACATCCGTTGGAATCGACACTGTGCGCACACGTCAGGAAAAAAATATC CGTCGTGCCAAAGCCCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTKTADNLQRHANFSRCGQYRYALWRQWGEGDDFMLLIGLNPSTTDPHQDNPTIRRCMGFAQDWGYSGLCVANLFAYRAT YPKDLFSAADPVGPQNDAWLRRLARQADLVVAAWGNHGRFNDRAVQVVRQLPTMHYIRLNRSGEPAHPLYLPRHLKAQPW VGYPSLP
Sequences:
>Translated_167_residues MTKTADNLQRHANFSRCGQYRYALWRQWGEGDDFMLLIGLNPSTTDPHQDNPTIRRCMGFAQDWGYSGLCVANLFAYRAT YPKDLFSAADPVGPQNDAWLRRLARQADLVVAAWGNHGRFNDRAVQVVRQLPTMHYIRLNRSGEPAHPLYLPRHLKAQPW VGYPSLP >Mature_166_residues TKTADNLQRHANFSRCGQYRYALWRQWGEGDDFMLLIGLNPSTTDPHQDNPTIRRCMGFAQDWGYSGLCVANLFAYRATY PKDLFSAADPVGPQNDAWLRRLARQADLVVAAWGNHGRFNDRAVQVVRQLPTMHYIRLNRSGEPAHPLYLPRHLKAQPWV GYPSLP
Specific function: Unknown
COG id: COG4333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19139; Mature: 19008
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTADNLQRHANFSRCGQYRYALWRQWGEGDDFMLLIGLNPSTTDPHQDNPTIRRCMGF CCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH AQDWGYSGLCVANLFAYRATYPKDLFSAADPVGPQNDAWLRRLARQADLVVAAWGNHGRF HHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCC NDRAVQVVRQLPTMHYIRLNRSGEPAHPLYLPRHLKAQPWVGYPSLP CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKTADNLQRHANFSRCGQYRYALWRQWGEGDDFMLLIGLNPSTTDPHQDNPTIRRCMGF CCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH AQDWGYSGLCVANLFAYRATYPKDLFSAADPVGPQNDAWLRRLARQADLVVAAWGNHGRF HHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCC NDRAVQVVRQLPTMHYIRLNRSGEPAHPLYLPRHLKAQPWVGYPSLP CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA